Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31548
         (415 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0548 + 4099386-4099847,4100435-4101316                           31   0.28 
03_01_0547 + 4093196-4093657,4094267-4095148                           31   0.28 
03_01_0544 + 4082528-4082989,4083585-4084466                           31   0.28 
03_01_0543 + 4076981-4077442,4078145-4079026                           31   0.28 
11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903     29   1.9  
09_04_0400 + 17296414-17296854,17299212-17299403                       27   7.8  

>03_01_0548 + 4099386-4099847,4100435-4101316
          Length = 447

 Score = 31.5 bits (68), Expect = 0.28
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   VRDMRQTVAVGVIKAV 49
           VRDMRQTVAVGVIK V
Sbjct: 414 VRDMRQTVAVGVIKNV 429


>03_01_0547 + 4093196-4093657,4094267-4095148
          Length = 447

 Score = 31.5 bits (68), Expect = 0.28
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   VRDMRQTVAVGVIKAV 49
           VRDMRQTVAVGVIK V
Sbjct: 414 VRDMRQTVAVGVIKNV 429


>03_01_0544 + 4082528-4082989,4083585-4084466
          Length = 447

 Score = 31.5 bits (68), Expect = 0.28
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   VRDMRQTVAVGVIKAV 49
           VRDMRQTVAVGVIK V
Sbjct: 414 VRDMRQTVAVGVIKNV 429


>03_01_0543 + 4076981-4077442,4078145-4079026
          Length = 447

 Score = 31.5 bits (68), Expect = 0.28
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +2

Query: 2   VRDMRQTVAVGVIKAV 49
           VRDMRQTVAVGVIK V
Sbjct: 414 VRDMRQTVAVGVIKNV 429


>11_06_0755 + 26943705-26944519,26944833-26944839,26945318-26947903
          Length = 1135

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 259 NYKIMLHYKPCKKYRKGMSL*P-FFPSK 179
           N   M    PCKK +KGM++ P FF SK
Sbjct: 657 NVNKMSKLNPCKKQKKGMNILPKFFTSK 684


>09_04_0400 + 17296414-17296854,17299212-17299403
          Length = 210

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 126 SSSYFLPLVAFSAALVTLPPPASLKLTALMTP 31
           SSS+  P ++FS+     PPP + +  A+  P
Sbjct: 16  SSSFMAPRISFSSDFALEPPPPAQQQPAVRAP 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,772,780
Number of Sequences: 37544
Number of extensions: 134503
Number of successful extensions: 345
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)