Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31547
(502 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29832| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_24315| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09) 29 2.2
SB_857| Best HMM Match : Mago_nashi (HMM E-Value=0) 29 2.2
SB_41851| Best HMM Match : Pkinase (HMM E-Value=0) 29 2.8
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09) 28 5.0
SB_27852| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022) 27 6.6
SB_20801| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.46) 27 8.7
>SB_29832| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1293
Score = 33.5 bits (73), Expect = 0.10
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 81 PTLEPIQDN-FIIVNVLRIPVCHSMICTYIVXFLYF 185
PT+EP QDN FI V +P + ICT+I YF
Sbjct: 107 PTIEPYQDNVFINVICRNLPQWNDRICTHIKLIKYF 142
>SB_24315| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 325 LSTCLDDLDNEXIKHIHHRQCFKMKLQNILHR 230
LST +D D I +H +C+ M + N+L R
Sbjct: 166 LSTAIDTSDAHAIDIKYHNKCYTMNVTNVLRR 197
>SB_42290| Best HMM Match : Band_41 (HMM E-Value=3.6e-09)
Length = 474
Score = 29.1 bits (62), Expect = 2.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 29 YCMDSCMNSDHYCPNCNAYIGTYTR*FH 112
YC +C ++ +YCP C +I T+ + H
Sbjct: 425 YCCQTCASNLYYCPLCKTFI-TFVQRIH 451
>SB_857| Best HMM Match : Mago_nashi (HMM E-Value=0)
Length = 900
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 179 IFHIHMINLKFGLMLYSSVEYILQFHLKALAV 274
+F+ INLK+G Y+ Y L ++ KA+AV
Sbjct: 556 VFYTKAINLKYGHFRYARAYYELGYYEKAVAV 587
>SB_41851| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 967
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +2
Query: 335 LFSENPTRLFNMMHLSMIX*XLNHSRYFK 421
+FS+NPTRL ++M +++ +HS+ K
Sbjct: 353 IFSDNPTRLMSVMKFAILAAQCSHSKVTK 381
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 38 DSCMNSDHYCPNCNAYIGTYTR*FHNCERI--AYSCMP 145
D+C HYCPN +A I +HN RI CMP
Sbjct: 2441 DACPPG-HYCPNGSAPISCPAGFYHNAGRIWNRTQCMP 2477
>SB_8350| Best HMM Match : ShTK (HMM E-Value=2.5e-09)
Length = 1103
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 11 PCVCLPYCMDSCMNSDHYCPNCNAYI 88
P VC P C D C Y PN + ++
Sbjct: 709 PQVCAPACSDICCGFGAYAPNPDTHV 734
>SB_27852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -3
Query: 167 YISANHRMAYRNTQYVHNYEIILYRFQ-CRRCSLDSNGPNSCTSP 36
YI N+ M N + N +I Y C++C LDS+ N +SP
Sbjct: 247 YIRNNYAMG--NQHFGLNKAVIAYVVDSCQKCGLDSHTSNENSSP 289
>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3592
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = -3
Query: 188 YEI*KRNYISANHRMAYRNTQY---VHNYEIILYRF 90
Y RNY ANH Y N Y +HNY ++ +
Sbjct: 3128 YPYANRNYPYANHNYPYANHNYPYAIHNYLYAIHNY 3163
>SB_58044| Best HMM Match : Vitellogenin_N (HMM E-Value=0.022)
Length = 1671
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 258 LKHWRW*MCFIXSLSKSSRQVLSVDDYFQKIL 353
LK+W+W + I + S ++ VD+ F+K+L
Sbjct: 743 LKNWKWLLGKIKKIQISLSKLTIVDEIFRKVL 774
>SB_20801| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.46)
Length = 521
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 325 LSTCLDDLDNEXIKHIHHRQCFKMKLQNILHR 230
LS+ ++ D I +H +C+ MK+ N+L R
Sbjct: 36 LSSAINASDAHAIDIKYHNKCYTMKVTNLLRR 67
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,641,160
Number of Sequences: 59808
Number of extensions: 257308
Number of successful extensions: 652
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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