Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31545
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF235828-1|AAK13958.1|   70|Homo sapiens immunoglobulin heavy ch...    33   0.59 
BC064360-1|AAH64360.1| 1162|Homo sapiens F-box and leucine-rich ...    30   5.5  
BC047371-1|AAH47371.1|  856|Homo sapiens FBXL11 protein protein.       30   5.5  
AK024505-1|BAB15795.1|  757|Homo sapiens FLJ00115 protein protein.     30   5.5  
AF179221-1|AAD56012.1|  474|Homo sapiens F-box protein Lilina pr...    30   5.5  
AB023221-1|BAA76848.2| 1163|Homo sapiens KIAA1004 protein protein.     30   5.5  

>AF235828-1|AAK13958.1|   70|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 70

 Score = 33.1 bits (72), Expect = 0.59
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +3

Query: 372 HVKLFYFCKMTSHMKHKTKLYFHTRGGARYP-IRPIVSRITIHW 500
           + K   + +M S     T +Y+  R G     +RPIV RITIHW
Sbjct: 25  NAKNLLYLQMNSLRVEDTAVYYCARAGTGSSNLRPIVMRITIHW 68


>BC064360-1|AAH64360.1| 1162|Homo sapiens F-box and leucine-rich
           repeat protein 11 protein.
          Length = 1162

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 316 SRRMLLLCVHVARAFFGWCCTKQ 248
           SRR L  C+ V + ++ WCC K+
Sbjct: 906 SRRELCECMRVCKTWYKWCCDKR 928


>BC047371-1|AAH47371.1|  856|Homo sapiens FBXL11 protein protein.
          Length = 856

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 316 SRRMLLLCVHVARAFFGWCCTKQ 248
           SRR L  C+ V + ++ WCC K+
Sbjct: 600 SRRELCECMRVCKTWYKWCCDKR 622


>AK024505-1|BAB15795.1|  757|Homo sapiens FLJ00115 protein protein.
          Length = 757

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 316 SRRMLLLCVHVARAFFGWCCTKQ 248
           SRR L  C+ V + ++ WCC K+
Sbjct: 501 SRRELCECMRVCKTWYKWCCDKR 523


>AF179221-1|AAD56012.1|  474|Homo sapiens F-box protein Lilina
           protein.
          Length = 474

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 316 SRRMLLLCVHVARAFFGWCCTKQ 248
           SRR L  C+ V + ++ WCC K+
Sbjct: 218 SRRELCECMRVCKTWYKWCCDKR 240


>AB023221-1|BAA76848.2| 1163|Homo sapiens KIAA1004 protein protein.
          Length = 1163

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 316 SRRMLLLCVHVARAFFGWCCTKQ 248
           SRR L  C+ V + ++ WCC K+
Sbjct: 907 SRRELCECMRVCKTWYKWCCDKR 929


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,756,515
Number of Sequences: 237096
Number of extensions: 1536404
Number of successful extensions: 2122
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2122
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)