Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31542
(405 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 69 2e-12
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 65 2e-11
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 1e-10
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 60 5e-10
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 60 5e-10
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 55 2e-08
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 50 5e-07
SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07) 50 7e-07
SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07) 50 7e-07
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 49 2e-06
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 44 6e-05
SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028) 41 3e-04
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 39 0.002
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 31 0.018
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.051
SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 32 0.20
SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 32 0.20
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 31 0.27
SB_50443| Best HMM Match : NinG (HMM E-Value=5.6) 31 0.47
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.82
SB_26577| Best HMM Match : Vicilin_N (HMM E-Value=1.5) 29 1.1
SB_19127| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_30741| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_48417| Best HMM Match : DUF646 (HMM E-Value=8.6) 27 5.8
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_46989| Best HMM Match : Pox_A32 (HMM E-Value=0.023) 27 5.8
SB_26860| Best HMM Match : Melittin (HMM E-Value=1.5) 27 5.8
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 27 5.8
SB_55882| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_41555| Best HMM Match : CXC (HMM E-Value=3.9) 27 7.7
SB_32297| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_9476| Best HMM Match : RuvB_N (HMM E-Value=0.35) 27 7.7
SB_6753| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 68.5 bits (160), Expect = 2e-12
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXX-IYSQ 254
AFS++D G GKI+ +G LLR+L NPT A + IY+
Sbjct: 519 AFSLFDRVGDGKIECDQIGCLLRSLGLNPTGAEVKKIEKDVDPKGIARVSFEEFLPIYTS 578
Query: 255 AKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
A K G+ ++F+E L+++D++ G +L AEL L++LGEKL D E
Sbjct: 579 AYQKKQTGSADEFVEGLRVFDRDGTGTVLAAELRSVLMSLGEKLSDEE 626
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 65.3 bits (152), Expect = 2e-11
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXX-IYSQ 254
+F +YD +G KID+ LG++LR L NPT A + +Y
Sbjct: 16 SFELYDKQGDEKIDSSQLGEVLRGLGQNPTNAEVKKIVSEMDPEGGNRISFEEFLPVYQS 75
Query: 255 AKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
K + + EDF++ L+++D + +G++ EL H L LGEKL DSE
Sbjct: 76 YMGKKPKFSTEDFVDSLRVFDNDGSGMINEGELRHILTTLGEKLTDSE 123
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 62.5 bits (145), Expect = 1e-10
Identities = 35/107 (32%), Positives = 52/107 (48%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AFS++D +G G I LG ++R+L NPT A + + A
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTIDFPEFLTMMA 74
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ KD + E+ E +++DK+ NG + AEL H + LGEKL D E
Sbjct: 75 RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 121
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 60.5 bits (140), Expect = 5e-10
Identities = 34/107 (31%), Positives = 52/107 (48%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AFS++D +G G I LG ++R+L NPT A + + A
Sbjct: 5 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTIDFPEFLTMMA 63
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ K+ + E+ E +++DK+ NG + AEL H + LGEKL D E
Sbjct: 64 RKMKNTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 110
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 60.5 bits (140), Expect = 5e-10
Identities = 34/107 (31%), Positives = 52/107 (48%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AFS++D +G G I LG ++R+L NPT A + + A
Sbjct: 5 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTIDFPEFLTMMA 63
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ K+ + E+ E +++DK+ NG + AEL H + LGEKL D E
Sbjct: 64 RKMKNTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 110
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 55.2 bits (127), Expect = 2e-08
Identities = 36/103 (34%), Positives = 53/103 (51%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AFS++D GKG IDA + D+LRA+ NP + I + S +
Sbjct: 15 AFSLFDKTGKGYIDADIVIDVLRAVGLNPQIDDIKKTEKELGTKPVSFDSFLSLYV-SYS 73
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKL 386
K K QG E+F+E L+ +D N +G M A+L + L +LG+ L
Sbjct: 74 K--KPQGGMEEFIEGLRAFDNNSDGTMSSAQLRNLLTSLGDTL 114
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 50.4 bits (115), Expect = 5e-07
Identities = 29/107 (27%), Positives = 50/107 (46%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AF+++D +G G I + L ++R+L NPT + + A
Sbjct: 295 AFALFDKDGGGSISSSELAHVMRSLGQNPTEQEL-KDMIAEVDQDDNGEIDFPEFLQMVA 353
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
K K+ E+ + K++DKN +G++ +EL + LGE+L D E
Sbjct: 354 KKIKETDTEEEIQDAFKVFDKNGDGMISSSELKLVMSNLGERLTDDE 400
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 297 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
E L+DK+ G + +EL H + +LG+ + E
Sbjct: 294 EAFALFDKDGGGSISSSELAHVMRSLGQNPTEQE 327
>SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07)
Length = 422
Score = 50.0 bits (114), Expect = 7e-07
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +3
Query: 81 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXX--IYSQ 254
F +YD G KID LG +LRA NPT + + +
Sbjct: 286 FDLYDTTGSEKIDVGYLGQVLRAAGLNPTQSEVRKVERDFGKSAMAFDEFLPIYHSVTQH 345
Query: 255 AKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ + + E ++C K +D++++G + + L H L +LGE+L D E
Sbjct: 346 CLTTEKKVSSESVIDCFKHFDRSDSGYISSSMLRHVLTSLGERLSDEE 393
>SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 154
Score = 50.0 bits (114), Expect = 7e-07
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Frame = +3
Query: 81 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXX--IYSQ 254
F +YD G KID LG +LRA NPT + + +
Sbjct: 18 FDLYDTTGSEKIDVGYLGQVLRAAGLNPTQSEVRKVERDFGKSAMAFDEFLPIYHSVTQH 77
Query: 255 AKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ + + E ++C K +D++++G + + L H L +LGE+L D E
Sbjct: 78 CLTTEKKVSSESVIDCFKHFDRSDSGYISSSMLRHVLTSLGERLSDEE 125
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 48.8 bits (111), Expect = 2e-06
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +3
Query: 291 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
F+EC K++D+N NGL+ AEL H L +LG+KL D E
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRHLLASLGDKLSDEE 42
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 43.6 bits (98), Expect = 6e-05
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 255 AKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
AK +Q + E+ E +++DK+ NG + AEL H + LGEKL D E
Sbjct: 38 AKKMGEQDSDEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 85
>SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028)
Length = 146
Score = 41.1 bits (92), Expect = 3e-04
Identities = 29/106 (27%), Positives = 45/106 (42%)
Frame = +3
Query: 81 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQAK 260
F ++D G G I+ +G +LRA+ NP + IY++
Sbjct: 15 FMLFDQIGDGNINYDQIGKMLRAMGLNPIDGEV-KKVEADFKTKERVSFEEWLPIYTEFS 73
Query: 261 NDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
K A EDFLE LK++D+ NG + L G+K+ + E
Sbjct: 74 KKKPP-AKEDFLEGLKVFDREANGKIDSGTFRGLLCNRGDKITEEE 118
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/107 (24%), Positives = 42/107 (39%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AF +D G G+IDA LG ++R++ +P + I A
Sbjct: 20 AFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEEL-KAMIKQADKDGSGDIDLPEFIELMA 78
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
K+ D E L+DK+ NGL+ E+ +G + + E
Sbjct: 79 SKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVFTCMGFNITEKE 125
Score = 33.1 bits (72), Expect = 0.089
Identities = 25/107 (23%), Positives = 40/107 (37%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AF +D G+IDA L + R++ +P + I A
Sbjct: 149 AFMSFDKNVDGRIDAEELEIVTRSIGLHPKDEEL-KAMIKQADKDGSGDIDLPEFIELMA 207
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
K+ D E L+DK+ NGL+ E+ L +G + + E
Sbjct: 208 SKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVLTCMGFNITEKE 254
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +3
Query: 243 IYSQAKNDKDQGA-YEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ QA D D YE+F +DKN +G + EL ++G D E
Sbjct: 129 LVKQADMDGDGHINYEEFKNAFMSFDKNVDGRIDAEELEIVTRSIGLHPKDEE 181
Score = 22.2 bits (45), Expect(2) = 4.1
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 39 RPQQGTTLKGRSFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 167
+ + TT AFS++D +G G I A + + + N T
Sbjct: 80 KSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVFTCMGFNIT 122
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 38.7 bits (86), Expect = 0.002
Identities = 26/109 (23%), Positives = 47/109 (43%)
Frame = +3
Query: 72 SFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYS 251
S FS++D +G G I L ++++L NP+ + +
Sbjct: 3 SGGFSLFDKDGSGTISNEELEVVMKSLGQNPSDEEL-QQMIQEVDADGNGEVDFEEFLAM 61
Query: 252 QAKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
K + + A + E +++D+N +G + EL + +LGEKL D E
Sbjct: 62 MKKQMQHRDAEAEMREAFRVFDRNGDGSISEWELRSVMASLGEKLSDDE 110
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 31.5 bits (68), Expect(2) = 0.018
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 252 QAKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ K++KD + E+ L+ KL+D +E G + L LGE L D E
Sbjct: 50 ELKSEKD--SKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE 96
Score = 23.0 bits (47), Expect(2) = 0.018
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNL 131
AF ++D +G G IDA L
Sbjct: 34 AFDLFDTDGSGTIDAKEL 51
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 33.9 bits (74), Expect = 0.051
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI--*XXXXXXXXXXXXXXXXXXXXIYS 251
AF +YD +G G + L +R L NPT I + +
Sbjct: 153 AFHMYDADGSGHVTTKELHKAMRTLGFNPTEEEIQEMVNEVDYDGNGVLDFNEFVDLMEN 212
Query: 252 QAKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
Q K D+++ +D + ++D ++ G + +EL L + +K+ + E
Sbjct: 213 QKKPDEEE---QDLINAFHVFDSDDKGYIEASELRDLLCGMEKKIPEDE 258
>SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 49
Score = 31.9 bits (69), Expect = 0.20
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 167
AF +D +G G I LG ++R+L NPT
Sbjct: 5 AFKFFDKDGNGHITTRELGAIMRSLGQNPT 34
>SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07)
Length = 97
Score = 31.9 bits (69), Expect = 0.20
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 167
AF +D +G G I LG ++R+L NPT
Sbjct: 53 AFKFFDKDGNGHITTRELGAIMRSLGQNPT 82
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 31.5 bits (68), Expect = 0.27
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 167
AF+++D + G I + LG ++RAL NPT
Sbjct: 15 AFNMFDNDRNGTICSHELGSVMRALGQNPT 44
>SB_50443| Best HMM Match : NinG (HMM E-Value=5.6)
Length = 477
Score = 30.7 bits (66), Expect = 0.47
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 9 GNRQTPHNNXRPQQGTTLKGRSFAFSIYD--FEGKGKI 116
G ++T H P +G L+G++ AFS +D +G G++
Sbjct: 71 GTQRTGHKRDLPGEGIQLRGQNLAFSAFDRFHDGLGRV 108
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 29.9 bits (64), Expect = 0.82
Identities = 14/54 (25%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Frame = +3
Query: 6 QGNRQTPHNNXRPQQGTTLKGRS-----FAFSIYDFEGKGKIDAFNLGDLLRAL 152
+ + QT P+ G ++K S +++++YDFEG+G++ +L +L++++
Sbjct: 231 EASTQTKPLKETPECGMSVKSASSDHQEWSYTLYDFEGQGQVTREDLRNLVKSI 284
>SB_26577| Best HMM Match : Vicilin_N (HMM E-Value=1.5)
Length = 649
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 3 GQGNRQTPHNNXRPQQGTTLKGRSFAFSIYDFEGKGKIDAFNLGD 137
GQG R+ RP G + G+S +FS D + KG+ N GD
Sbjct: 170 GQGTRERSDFAGRPPSGKKI-GKSNSFSHRDAKTKGEASDSNAGD 213
>SB_19127| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1492
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +3
Query: 6 QGNRQTPHNNXRPQQGTTLKGRSFAFSIYD--FEGKGKI 116
Q + T H + P +G L+G++ AFS+ D +G G++
Sbjct: 175 QEHNATGHEHDLPGEGIQLRGQNLAFSVVDRLHDGLGRV 213
>SB_30741| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 9 GNRQTPHNNXRPQQGTTLKGRSFAFSIYD--FEGKGKI 116
G H + P +G L+G++ AFS+ D +G G++
Sbjct: 78 GRHACGHEHDLPGEGVLLRGQNLAFSVVDRFHDGLGRV 115
>SB_48417| Best HMM Match : DUF646 (HMM E-Value=8.6)
Length = 623
Score = 27.1 bits (57), Expect = 5.8
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 27 HNNXRPQQGTTLKGRSFAFSIYD--FEGKGKI 116
H + P +G L+G++ AFS+ D +G G++
Sbjct: 68 HEHDLPGEGVLLRGQNLAFSVVDRFHDGLGRV 99
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 27.1 bits (57), Expect = 5.8
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +1
Query: 76 SPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNS 189
SPS+S+ K +S+P ++A S +T + QPS NS
Sbjct: 355 SPSKSSGSSQKKQSLPPSIATSSVGIKRTKNPQPSLNS 392
>SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 82 SQSTTLKAKVRSMPST-LAIS*ERSTQTPHWQPSRNSVVQ 198
++S +A++R+ P+ + +S ++ T T H Q +RNS +Q
Sbjct: 97 TKSEWKRARLRAHPTVPITVSLDKQTTTKHSQSARNSSLQ 136
>SB_46989| Best HMM Match : Pox_A32 (HMM E-Value=0.023)
Length = 719
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +3
Query: 27 HNNXRPQQGTTLKGRSFAFSIYD--FEGKGKI 116
H P +G L+G++FAFS D +G G++
Sbjct: 54 HERDLPGEGIQLRGQNFAFSAVDRFHDGLGRV 85
>SB_26860| Best HMM Match : Melittin (HMM E-Value=1.5)
Length = 595
Score = 27.1 bits (57), Expect = 5.8
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +3
Query: 27 HNNXRPQQGTTLKGRSFAFSIYD--FEGKGKI 116
H P +GT L+G++ AFS D +G G++
Sbjct: 282 HERDLPGEGTQLRGQNLAFSAVDRFHDGLGRV 313
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 6 QGNRQTPHNNXRPQQGTTLKGRSFAFSIYD--FEGKGKI 116
Q T H P +G L+G++ AFS D +G G++
Sbjct: 77 QERNATGHKRDLPGEGVQLRGQNLAFSAVDRFHDGLGRV 115
>SB_55882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 837
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 6 QGNRQTPHNNXRPQQGTTLKGRSFAFSIYD--FEGKGKI 116
Q T H P +G L+G++ AFS D +G G++
Sbjct: 110 QKRNATGHKRNLPGEGIQLRGQNLAFSAVDRFHDGLGRV 148
>SB_41555| Best HMM Match : CXC (HMM E-Value=3.9)
Length = 607
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 27 HNNXRPQQGTTLKGRSFAFSIYD--FEGKGKI 116
H + P +G L+G++ AFS+ D +G G++
Sbjct: 14 HEHDLPGEGIQLRGQNLAFSVVDRFHDGLGRV 45
>SB_32297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 26.6 bits (56), Expect = 7.7
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 6 QGNRQTPHNNXRPQQGTTLKGRSFAFSIYD--FEGKGKI 116
Q T H P +G L+G++ AFS D +G G++
Sbjct: 10 QKRNATGHKRNLPGEGIQLRGQNLAFSAVDRFHDGLGRV 48
>SB_9476| Best HMM Match : RuvB_N (HMM E-Value=0.35)
Length = 848
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +2
Query: 137 SPESAQLKPHTGNHLETRWXKEEGREAAHTRRVPXHLQPSKERQRPGSV*RFPGMSEAV 313
S E ++K +T + GR TR+ + P E+ RP S+ + G + +
Sbjct: 274 SKEEKEVKKGNNTETKTENPGQIGRPTVFTRKTKVNFVPLAEQMRPTSLEDYVGQEQVL 332
>SB_6753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 27 HNNXRPQQGTTLKGRSFAFSIYD--FEGKGKI 116
H + P +G L+G++ AFS+ D +G G++
Sbjct: 14 HEHDLPGEGIQLRGQNLAFSVVDRFHDGLGRV 45
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,158,374
Number of Sequences: 59808
Number of extensions: 197818
Number of successful extensions: 549
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 532
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 727815563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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