Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31542
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 77 6e-15
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 77 6e-15
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 62 1e-10
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 62 1e-10
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 61 3e-10
Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical pr... 58 3e-09
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 42 2e-04
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 42 2e-04
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 38 0.004
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 38 0.004
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 36 0.015
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 36 0.015
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 36 0.015
Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical p... 34 0.045
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 33 0.059
U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light c... 33 0.059
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 28 2.2
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 27 3.9
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 27 3.9
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 27 3.9
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 27 3.9
AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical... 27 5.1
AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical ... 27 5.1
AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical ... 27 5.1
Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical p... 27 6.8
Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical pr... 27 6.8
U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase ... 27 6.8
AL110500-13|CAB54495.1| 791|Caenorhabditis elegans Hypothetical... 26 9.0
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 76.6 bits (180), Expect = 6e-15
Identities = 43/108 (39%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Frame = +3
Query: 81 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXI--YSQ 254
F++YD E GKID +GD+ RA PT A + + Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 255 AKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E
Sbjct: 73 LAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADE 120
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 76.6 bits (180), Expect = 6e-15
Identities = 43/108 (39%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Frame = +3
Query: 81 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXI--YSQ 254
F++YD E GKID +GD+ RA PT A + + Y Q
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEEWLPMYEQ 72
Query: 255 AKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+K+QG Y DF E LK++DK E G +L AEL H LLALGE+L E
Sbjct: 73 LAKEKEQGTYADFYEGLKVFDKEETGKILAAELRHILLALGERLSADE 120
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 62.5 bits (145), Expect = 1e-10
Identities = 35/107 (32%), Positives = 52/107 (48%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AFS++D +G G I LG ++R+L NPT A + + A
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTIDFPEFLTMMA 74
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ KD + E+ E +++DK+ NG + AEL H + LGEKL D E
Sbjct: 75 RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 121
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 62.5 bits (145), Expect = 1e-10
Identities = 35/107 (32%), Positives = 52/107 (48%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AFS++D +G G I LG ++R+L NPT A + + A
Sbjct: 16 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL-QDMINEVDADGNGTIDFPEFLTMMA 74
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ KD + E+ E +++DK+ NG + AEL H + LGEKL D E
Sbjct: 75 RKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 121
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 61.3 bits (142), Expect = 3e-10
Identities = 36/106 (33%), Positives = 53/106 (50%)
Frame = +3
Query: 81 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQAK 260
F+ +D +G +I +GD+LRAL NPT A I S +K
Sbjct: 11 FAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFEDFVPIFQSVSK 70
Query: 261 NDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
N +++ E+F+E L +DK NG++ AEL H L LGE+L D +
Sbjct: 71 N-REKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDED 115
>Z70267-5|CAA94209.2| 143|Caenorhabditis elegans Hypothetical
protein K04C1.4 protein.
Length = 143
Score = 57.6 bits (133), Expect = 3e-09
Identities = 32/106 (30%), Positives = 52/106 (49%)
Frame = +3
Query: 81 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQAK 260
F ++D +G GKIDA + ++LR+L+ NP + + + S +
Sbjct: 14 FMLFDKKGDGKIDAAQVFEVLRSLDENPKNSDV-HQCLAKFDKTARISFENFLPVLSHVR 72
Query: 261 NDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
N+K + EDF++ L +DK G + AEL L +G+KL D E
Sbjct: 73 NNKIPYSMEDFIKGLSHFDKEGEGFITSAELRQVLTTMGDKLSDEE 118
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 41.9 bits (94), Expect = 2e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 255 AKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
A+ K + E+ E +++DK+ NG + AEL H + LGEKL D E
Sbjct: 23 ARKMKGTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEE 70
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 41.5 bits (93), Expect = 2e-04
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Frame = +3
Query: 81 FSIYDFEGKGKIDAFNLGDLLRALNS---NPTLATI*XXXXXXXXXXXXXXXXXXXXIYS 251
F+++D EGKG I A +G +LR + L +
Sbjct: 24 FNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEFAAMVANF 83
Query: 252 QAKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
N+ D+G E+ E +LYDK NG + ++L L AL + + + E
Sbjct: 84 VVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEE 132
Score = 33.9 bits (74), Expect = 0.045
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSN 161
AF +YD EG G I+ +L D+LRAL+ N
Sbjct: 100 AFRLYDKEGNGYINVSDLRDILRALDDN 127
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 41.5 bits (93), Expect = 2e-04
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Frame = +3
Query: 81 FSIYDFEGKGKIDAFNLGDLLRALNS---NPTLATI*XXXXXXXXXXXXXXXXXXXXIYS 251
F+++D EGKG I A +G +LR + L +
Sbjct: 24 FNMFDKEGKGYIRATQVGQILRTMGQAFEERDLKQLIKEFDADGSGEIEFEEFAAMVANF 83
Query: 252 QAKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
N+ D+G E+ E +LYDK NG + ++L L AL + + + E
Sbjct: 84 VVNNENDEGLEEELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEE 132
Score = 33.9 bits (74), Expect = 0.045
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSN 161
AF +YD EG G I+ +L D+LRAL+ N
Sbjct: 100 AFRLYDKEGNGYINVSDLRDILRALDDN 127
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 37.5 bits (83), Expect = 0.004
Identities = 23/107 (21%), Positives = 42/107 (39%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AF ++D +G G I + LG +R+L NPT +
Sbjct: 40 AFRLFDKDGNGSISSKELGVAMRSLGQNPTEQEL--LDMVNEVDIDGSGTIDFGEFCQMM 97
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
K + E E +++D++ NG + E + + +G++ D E
Sbjct: 98 KRMNKENDSEMIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQE 144
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 37.5 bits (83), Expect = 0.004
Identities = 23/107 (21%), Positives = 42/107 (39%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AF ++D +G G I + LG +R+L NPT +
Sbjct: 40 AFRLFDKDGNGSISSKELGVAMRSLGQNPTEQEL--LDMVNEVDIDGSGTIDFGEFCQMM 97
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
K + E E +++D++ NG + E + + +G++ D E
Sbjct: 98 KRMNKENDSEMIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQE 144
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 35.5 bits (78), Expect = 0.015
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXX-IYSQ 254
AF ++D +G ++ LG+ +R L NPT + + +
Sbjct: 28 AFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEYDVDGNGKIDFGEFCKMMKE 87
Query: 255 AKNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ DQ E K++DK+ NG + E H + +GE+ + E
Sbjct: 88 MNKETDQ---ELIRLAFKVFDKDGNGYITAQEFKHFMTTMGERFSEEE 132
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 35.5 bits (78), Expect = 0.015
Identities = 24/107 (22%), Positives = 43/107 (40%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AF ++D +G G I LG +R+L NPT I +
Sbjct: 86 AFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCV--MM 143
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
K + E E +++DK+ NG++ E + ++ +G + + E
Sbjct: 144 KRMMKETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEE 190
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 35.5 bits (78), Expect = 0.015
Identities = 24/107 (22%), Positives = 43/107 (40%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AF ++D +G G I LG +R+L NPT I +
Sbjct: 29 AFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCV--MM 86
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
K + E E +++DK+ NG++ E + ++ +G + + E
Sbjct: 87 KRMMKETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEE 133
>Z81568-13|CAH10811.1| 153|Caenorhabditis elegans Hypothetical
protein K08E3.10 protein.
Length = 153
Score = 33.9 bits (74), Expect = 0.045
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Frame = +3
Query: 81 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQAK 260
F +D G GKID+ L LRA+ NPT A + IY + +
Sbjct: 14 FHFHDTLGDGKIDSKQLPTALRAMMLNPTEALL-AEVSKARTSGARITVEEFIPIYKKVE 72
Query: 261 NDKDQG-AYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ ++F L +D+ NG ++ EL L GEK+ + E
Sbjct: 73 AACGRSTTLKEFQTLLSHFDREGNGQIMLMELKSMLQNGGEKMTNQE 119
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 33.5 bits (73), Expect = 0.059
Identities = 25/107 (23%), Positives = 42/107 (39%)
Frame = +3
Query: 78 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI*XXXXXXXXXXXXXXXXXXXXIYSQA 257
AF ++D +G G I LG +RAL NPT + +
Sbjct: 34 AFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDVDLDGNGQVEFPEFCV--MM 91
Query: 258 KNDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
K + E E K++D++ NG++ E ++ +G D+ E
Sbjct: 92 KRIMKETDSEMIREAFKIFDRDGNGVITANEFKLFMINMGMCFDEVE 138
>U00050-11|AAM22061.1| 90|Caenorhabditis elegans Myosin light
chain protein 3, isoformb protein.
Length = 90
Score = 33.5 bits (73), Expect = 0.059
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 81 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI 179
F++YD E GKID +GD+ RA PT A +
Sbjct: 13 FNLYDEELDGKIDGTQVGDVARAAGLKPTQAMV 45
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 297 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
E + +DKN +G + EL LL LGEK +S+
Sbjct: 11 EVFREFDKNGDGRITRQELEVALLQLGEKASNSK 44
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 297 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
+ ++DKN +G++ +L + LGEKL ++E
Sbjct: 84 DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETE 117
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +3
Query: 270 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
DQ ++F E + D+N++G++ ++L ++G+ DS+
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQ 64
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +3
Query: 270 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
DQ ++F E + D+N++G++ ++L ++G+ DS+
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQ 64
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +3
Query: 270 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
DQ ++F E + D+N++G++ ++L ++G+ DS+
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQ 64
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 27.5 bits (58), Expect = 3.9
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +3
Query: 270 DQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 398
DQ ++F E + D+N++G++ ++L ++G+ DS+
Sbjct: 22 DQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQ 64
>AL032637-12|CAA21614.1| 338|Caenorhabditis elegans Hypothetical
protein Y43F8C.13 protein.
Length = 338
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +3
Query: 93 DFEGKGKIDAFNLGDLLRALNSNPTLATI 179
DFEG+GK + L D+LR N + TL TI
Sbjct: 106 DFEGEGKHASLALIDILRE-NRDATLVTI 133
>AF106590-2|AAC78237.2| 301|Caenorhabditis elegans Hypothetical
protein F08B6.3 protein.
Length = 301
Score = 27.1 bits (57), Expect = 5.1
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 309 LYDKNENGLMLGAELTHTLLALG 377
+YDKN++G + G ELT LL G
Sbjct: 223 VYDKNKDGKLAGDELTDWLLVDG 245
>AF026214-6|AAB71316.3| 875|Caenorhabditis elegans Hypothetical
protein F52H2.7 protein.
Length = 875
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 167 CGV*VERSQEIAKVEGIDLTFAFKVVD 87
C + +ER + +AK E +D TF+FKV D
Sbjct: 101 CNIFMERMR-MAKTEVLDETFSFKVYD 126
>Z81497-8|CAC70080.1| 707|Caenorhabditis elegans Hypothetical
protein F57F5.5 protein.
Length = 707
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 377 T*CKKRVCELSAKHETVFVLVIQLQTFQEIF 285
T C+KR+ L+AKH + L QT +F
Sbjct: 423 TMCEKRILSLAAKHPFLTALHSSFQTSDRLF 453
>Z75953-7|CAB00101.2| 707|Caenorhabditis elegans Hypothetical
protein F57F5.5 protein.
Length = 707
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 377 T*CKKRVCELSAKHETVFVLVIQLQTFQEIF 285
T C+KR+ L+AKH + L QT +F
Sbjct: 423 TMCEKRILSLAAKHPFLTALHSSFQTSDRLF 453
>Z66494-10|CAF31472.1| 500|Caenorhabditis elegans Hypothetical
protein C34C6.6b protein.
Length = 500
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 249 SQAKNDKDQGAYEDFLECLKLYDKNENGLM 338
+ A+N+KDQ A + F +CL++ N+ L+
Sbjct: 259 AHAENEKDQLAMQAFQKCLQIDAGNKEALL 288
>Z66494-9|CAA91260.1| 502|Caenorhabditis elegans Hypothetical
protein C34C6.6a protein.
Length = 502
Score = 26.6 bits (56), Expect = 6.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 249 SQAKNDKDQGAYEDFLECLKLYDKNENGLM 338
+ A+N+KDQ A + F +CL++ N+ L+
Sbjct: 261 AHAENEKDQLAMQAFQKCLQIDAGNKEALL 290
>U00181-1|AAA18259.1| 707|Caenorhabditis elegans protein kinase C
protein.
Length = 707
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 377 T*CKKRVCELSAKHETVFVLVIQLQTFQEIF 285
T C+KR+ L+AKH + L QT +F
Sbjct: 423 TMCEKRILSLAAKHPFLTALHSSFQTSDRLF 453
>AL110500-13|CAB54495.1| 791|Caenorhabditis elegans Hypothetical
protein Y87G2A.12 protein.
Length = 791
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 161 PHTGNHLETRWXKEEGREAAHTRRVPXHLQ 250
P TGNH++ + H +RV HLQ
Sbjct: 423 PVTGNHVQLEEIHHSSKANHHPQRVQHHLQ 452
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,826,405
Number of Sequences: 27780
Number of extensions: 129585
Number of successful extensions: 352
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -