Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31541
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   5.7  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   5.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   5.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   5.7  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   5.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   5.7  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   10.0 
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   10.0 

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 85  TGAPPSYGIDHSDTVYM 35
           +G    YG+ H+D  YM
Sbjct: 454 SGTSNKYGVCHADDAYM 470


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = +1

Query: 412 SNNCRQHAPTSAGVRSQGSTSLSPMTCRSLWANTR 516
           +  C+++A +S  +RS+  +     +C S + ++R
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = +1

Query: 412 SNNCRQHAPTSAGVRSQGSTSLSPMTCRSLWANTR 516
           +  C+++A +S  +RS+  +     +C S + ++R
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = +1

Query: 412 SNNCRQHAPTSAGVRSQGSTSLSPMTCRSLWANTR 516
           +  C+++A +S  +RS+  +     +C S + ++R
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = +1

Query: 412 SNNCRQHAPTSAGVRSQGSTSLSPMTCRSLWANTR 516
           +  C+++A +S  +RS+  +     +C S + ++R
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = +1

Query: 412 SNNCRQHAPTSAGVRSQGSTSLSPMTCRSLWANTR 516
           +  C+++A +S  +RS+  +     +C S + ++R
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = +1

Query: 412 SNNCRQHAPTSAGVRSQGSTSLSPMTCRSLWANTR 516
           +  C+++A +S  +RS+  +     +C S + ++R
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDSR 238


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 267 KLIADAITENPQNYHIYE 320
           KL  D  +EN +NY  Y+
Sbjct: 69  KLATDTTSENEENYPHYQ 86


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 85  TGAPPSYGIDHSDTVYM 35
           +G    YG+ H+D  YM
Sbjct: 454 SGTSNKYGVCHADDAYM 470


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 298 GFSVMASAMSFLLPKIVLW 242
           GFS  +  +S L+P ++L+
Sbjct: 8   GFSASSVFLSLLIPALILY 26


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = +1

Query: 412 SNNCRQHAPTSAGVRSQGSTSLSPMTCRSLWANTR 516
           +  C+++A +S  +RS+  +     +C S + + R
Sbjct: 204 TKTCKKYAISSNSLRSRSRSFQRTSSCHSRYEDLR 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,726
Number of Sequences: 438
Number of extensions: 2625
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)