Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31540
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    26   0.17 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    25   0.30 
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   0.92 
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   1.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   6.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   6.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.5  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +2

Query: 20  RMIFQFVDIFNQLSGFFGMHTM 85
           R++ +  D+   ++GF+G+HT+
Sbjct: 251 RLVEEIEDVIEAINGFYGVHTL 272


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 125 MDTTKAVGSFDSSTLYASQRNLIVD*IYLQIEKSFFF 15
           +D  K +   D   +YAS +NL  D  +L  +K F F
Sbjct: 202 VDAAKHMWPADLEAIYASLKNLNTDHGFLDGQKPFIF 238


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 125 MDTTKAVGSFDSSTLYASQRNLIVD*IYLQIEKSFFF 15
           +D  K +   D   +Y S +NL  D  +L  +K F F
Sbjct: 203 VDAAKHMWPADLEAIYGSLKNLNTDHGFLDGQKPFIF 239


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -2

Query: 125 MDTTKAVGSFDSSTLYASQRNLIVD*IYLQIEKSFFF 15
           +D  K +   D   +Y S +NL  D  +L  +K F F
Sbjct: 203 VDAAKHMWPADLEAIYGSLKNLNTDHGFLLGQKPFIF 239


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +3

Query: 237 WLGRWNN*NACES*DWYTGSKR*VS 311
           WL   +N N  E  DWYTG K  +S
Sbjct: 663 WLN--HNPNYAEVTDWYTGWKNMLS 685


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = -2

Query: 281 ILTFTSISIIPPAQPLSIANSDIQGTIVNTPLIV 180
           ++TFTS+ I+   Q + + +     TI++   ++
Sbjct: 206 LITFTSLQIMVYLQHIFVKSRPSPATIISNVTVI 239


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = -2

Query: 281 ILTFTSISIIPPAQPLSIANSDIQGTIVNTPLIV 180
           ++TFTS+ I+   Q + + +     TI++   ++
Sbjct: 206 LITFTSLQIMVYLQHIFVKSRPSPATIISNVTVI 239


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/34 (23%), Positives = 19/34 (55%)
 Frame = -2

Query: 281 ILTFTSISIIPPAQPLSIANSDIQGTIVNTPLIV 180
           ++TFTS+ I+   Q + + +     TI++   ++
Sbjct: 526 LITFTSLQIMVYLQHIFVKSRPSPATIISNVTVI 559


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,984
Number of Sequences: 336
Number of extensions: 2666
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)