Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31540
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024592-1|AAH24592.1| 729|Homo sapiens neurochondrin protein. 64 2e-10
AC004865-1|AAD05029.1| 730|Homo sapiens unknown protein. 64 2e-10
AB027514-2|BAA77831.1| 712|Homo sapiens neurochondrin-2 protein. 64 2e-10
AB027514-1|BAA77830.1| 729|Homo sapiens neurochondrin-1 protein. 64 2e-10
AB018740-1|BAA85385.2| 712|Homo sapiens neurochondrin-2 protein. 64 2e-10
AB018739-1|BAA85384.2| 729|Homo sapiens neurochondrin-1 protein. 64 2e-10
AB011179-1|BAA25533.1| 731|Homo sapiens KIAA0607 protein protein. 64 2e-10
BX538025-1|CAD97971.1| 2416|Homo sapiens hypothetical protein pr... 32 1.4
AB002319-1|BAA20779.1| 1542|Homo sapiens KIAA0321 protein. 32 1.4
BC049207-1|AAH49207.1| 396|Homo sapiens solute carrier family 5... 30 5.5
AY299482-1|AAQ73572.1| 618|Homo sapiens sodium-iodide related c... 30 5.5
>BC024592-1|AAH24592.1| 729|Homo sapiens neurochondrin protein.
Length = 729
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/108 (25%), Positives = 57/108 (52%)
Frame = +1
Query: 97 NDPTALVVSMSYKEHWNEIADLWFLGMQTMSGVLTIVPWISEFAIESGWAGGIIEMLVKV 276
+D L +S Y+ W ++ +LWFLGMQ +G + ++PW++ A+ S W ++++L V
Sbjct: 615 SDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSV 674
Query: 277 KIGTLAPNVKSAFEDFLCRLVDSNESVIPVLKKAGALKMCRNHRLMDL 420
++ P + +A++ L L +N ++ + ++R+ L
Sbjct: 675 SPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAAL 722
>AC004865-1|AAD05029.1| 730|Homo sapiens unknown protein.
Length = 730
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/108 (25%), Positives = 57/108 (52%)
Frame = +1
Query: 97 NDPTALVVSMSYKEHWNEIADLWFLGMQTMSGVLTIVPWISEFAIESGWAGGIIEMLVKV 276
+D L +S Y+ W ++ +LWFLGMQ +G + ++PW++ A+ S W ++++L V
Sbjct: 616 SDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSV 675
Query: 277 KIGTLAPNVKSAFEDFLCRLVDSNESVIPVLKKAGALKMCRNHRLMDL 420
++ P + +A++ L L +N ++ + ++R+ L
Sbjct: 676 SPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAAL 723
>AB027514-2|BAA77831.1| 712|Homo sapiens neurochondrin-2 protein.
Length = 712
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/108 (25%), Positives = 57/108 (52%)
Frame = +1
Query: 97 NDPTALVVSMSYKEHWNEIADLWFLGMQTMSGVLTIVPWISEFAIESGWAGGIIEMLVKV 276
+D L +S Y+ W ++ +LWFLGMQ +G + ++PW++ A+ S W ++++L V
Sbjct: 598 SDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSV 657
Query: 277 KIGTLAPNVKSAFEDFLCRLVDSNESVIPVLKKAGALKMCRNHRLMDL 420
++ P + +A++ L L +N ++ + ++R+ L
Sbjct: 658 SPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAAL 705
>AB027514-1|BAA77830.1| 729|Homo sapiens neurochondrin-1 protein.
Length = 729
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/108 (25%), Positives = 57/108 (52%)
Frame = +1
Query: 97 NDPTALVVSMSYKEHWNEIADLWFLGMQTMSGVLTIVPWISEFAIESGWAGGIIEMLVKV 276
+D L +S Y+ W ++ +LWFLGMQ +G + ++PW++ A+ S W ++++L V
Sbjct: 615 SDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSV 674
Query: 277 KIGTLAPNVKSAFEDFLCRLVDSNESVIPVLKKAGALKMCRNHRLMDL 420
++ P + +A++ L L +N ++ + ++R+ L
Sbjct: 675 SPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAAL 722
>AB018740-1|BAA85385.2| 712|Homo sapiens neurochondrin-2 protein.
Length = 712
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/108 (25%), Positives = 57/108 (52%)
Frame = +1
Query: 97 NDPTALVVSMSYKEHWNEIADLWFLGMQTMSGVLTIVPWISEFAIESGWAGGIIEMLVKV 276
+D L +S Y+ W ++ +LWFLGMQ +G + ++PW++ A+ S W ++++L V
Sbjct: 598 SDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSV 657
Query: 277 KIGTLAPNVKSAFEDFLCRLVDSNESVIPVLKKAGALKMCRNHRLMDL 420
++ P + +A++ L L +N ++ + ++R+ L
Sbjct: 658 SPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAAL 705
>AB018739-1|BAA85384.2| 729|Homo sapiens neurochondrin-1 protein.
Length = 729
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/108 (25%), Positives = 57/108 (52%)
Frame = +1
Query: 97 NDPTALVVSMSYKEHWNEIADLWFLGMQTMSGVLTIVPWISEFAIESGWAGGIIEMLVKV 276
+D L +S Y+ W ++ +LWFLGMQ +G + ++PW++ A+ S W ++++L V
Sbjct: 615 SDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSV 674
Query: 277 KIGTLAPNVKSAFEDFLCRLVDSNESVIPVLKKAGALKMCRNHRLMDL 420
++ P + +A++ L L +N ++ + ++R+ L
Sbjct: 675 SPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAAL 722
>AB011179-1|BAA25533.1| 731|Homo sapiens KIAA0607 protein protein.
Length = 731
Score = 64.5 bits (150), Expect = 2e-10
Identities = 27/108 (25%), Positives = 57/108 (52%)
Frame = +1
Query: 97 NDPTALVVSMSYKEHWNEIADLWFLGMQTMSGVLTIVPWISEFAIESGWAGGIIEMLVKV 276
+D L +S Y+ W ++ +LWFLGMQ +G + ++PW++ A+ S W ++++L V
Sbjct: 617 SDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELLQLLGSV 676
Query: 277 KIGTLAPNVKSAFEDFLCRLVDSNESVIPVLKKAGALKMCRNHRLMDL 420
++ P + +A++ L L +N ++ + ++R+ L
Sbjct: 677 SPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAAL 724
>BX538025-1|CAD97971.1| 2416|Homo sapiens hypothetical protein
protein.
Length = 2416
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -3
Query: 484 YLSTKSKILLNKL---PSHQIISCQDPLV---DDSDTFLGHLLF*GQV*HFRLSQLIYKE 323
Y ST + +LL L P H + +P V S + HLLF QV RL+ L+ +E
Sbjct: 1035 YCSTLAAVLLQSLSSEPDHVEVKVGNPFVLLQQSSSQLVSHLLFERQVPPERLAALLAQE 1094
Query: 322 NL 317
NL
Sbjct: 1095 NL 1096
>AB002319-1|BAA20779.1| 1542|Homo sapiens KIAA0321 protein.
Length = 1542
Score = 31.9 bits (69), Expect = 1.4
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Frame = -3
Query: 484 YLSTKSKILLNKL---PSHQIISCQDPLV---DDSDTFLGHLLF*GQV*HFRLSQLIYKE 323
Y ST + +LL L P H + +P V S + HLLF QV RL+ L+ +E
Sbjct: 161 YCSTLAAVLLQSLSSEPDHVEVKVGNPFVLLQQSSSQLVSHLLFERQVPPERLAALLAQE 220
Query: 322 NL 317
NL
Sbjct: 221 NL 222
>BC049207-1|AAH49207.1| 396|Homo sapiens solute carrier family 5
(sodium/glucose cotransporter), member 12 protein.
Length = 396
Score = 29.9 bits (64), Expect = 5.5
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -2
Query: 380 PAFLRTGITLSFESTNLQ-RKSSKADLTFGASVPILTFTSISIIPPAQPLS-IANSDIQG 207
P F R+GIT ++E L+ K + T V + +T + + PA L+ + D+ G
Sbjct: 101 PVFYRSGITSTYEYLQLRFNKPVRYAATVIYIVQTILYTGVVVYAPALALNQVTGFDLWG 160
Query: 206 TIVNTPLIVC 177
++ T IVC
Sbjct: 161 SVFATG-IVC 169
>AY299482-1|AAQ73572.1| 618|Homo sapiens sodium-iodide related
cotransporter protein.
Length = 618
Score = 29.9 bits (64), Expect = 5.5
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -2
Query: 380 PAFLRTGITLSFESTNLQ-RKSSKADLTFGASVPILTFTSISIIPPAQPLS-IANSDIQG 207
P F R+GIT ++E L+ K + T V + +T + + PA L+ + D+ G
Sbjct: 101 PVFYRSGITSTYEYLQLRFNKPVRYAATVIYIVQTILYTGVVVYAPALALNQVTGFDLWG 160
Query: 206 TIVNTPLIVC 177
++ T IVC
Sbjct: 161 SVFATG-IVC 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,748,111
Number of Sequences: 237096
Number of extensions: 1449581
Number of successful extensions: 14303
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14301
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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