Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31540
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118571-1|AAM49940.2|  293|Drosophila melanogaster LD42676p pro...   244   4e-65
AE014297-469|AAF54119.1|  723|Drosophila melanogaster CG2330-PA ...   244   4e-65
Y14999-1|CAB40628.1| 1408|Drosophila melanogaster Bip2 protein p...    32   0.53 
AY061276-1|AAL28824.1|  681|Drosophila melanogaster LD19767p pro...    32   0.53 
AJ292191-1|CAC34474.1| 1408|Drosophila melanogaster TAFII155 pro...    32   0.53 
AJ251945-1|CAB64265.1| 1406|Drosophila melanogaster BIP2 protein...    32   0.53 
AE014135-85|AAF59342.1| 1406|Drosophila melanogaster CG2009-PA p...    32   0.53 
BT022986-1|AAY55402.1|  240|Drosophila melanogaster IP08456p pro...    29   3.7  
AY060440-1|AAL25479.1|   91|Drosophila melanogaster LD47115p pro...    29   3.7  
AE014134-382|AAF51273.1|  242|Drosophila melanogaster CG4271-PA ...    29   3.7  

>AY118571-1|AAM49940.2|  293|Drosophila melanogaster LD42676p
           protein.
          Length = 293

 Score =  244 bits (598), Expect = 4e-65
 Identities = 109/147 (74%), Positives = 131/147 (89%)
 Frame = +1

Query: 1   QANKVKKNDFSICRYIQSTIRFLWDAYNVDESNDPTALVVSMSYKEHWNEIADLWFLGMQ 180
           Q+ KVK+NDFSICRYIQ+TIRFLWDAYN+DESNDPTALVVS++YK +W+++++LWFLGMQ
Sbjct: 147 QSKKVKQNDFSICRYIQATIRFLWDAYNIDESNDPTALVVSIAYKGYWSDLSELWFLGMQ 206

Query: 181 TMSGVLTIVPWISEFAIESGWAGGIIEMLVKVKIGTLAPNVKSAFEDFLCRLVDSNESVI 360
           TM GVL +VPW+SEFA+ESGWA GI++ L KVKIGTL  NVKSA+EDFL +LVD N  V 
Sbjct: 207 TMCGVLPLVPWLSEFALESGWAEGIVKTLKKVKIGTLPANVKSAYEDFLSQLVDVNGDVQ 266

Query: 361 PVLKKAGALKMCRNHRLMDLGKKLFGD 441
            VLKKA AL++CRNHR+MDLGKKLFGD
Sbjct: 267 AVLKKADALRVCRNHRMMDLGKKLFGD 293


>AE014297-469|AAF54119.1|  723|Drosophila melanogaster CG2330-PA
            protein.
          Length = 723

 Score =  244 bits (598), Expect = 4e-65
 Identities = 109/147 (74%), Positives = 131/147 (89%)
 Frame = +1

Query: 1    QANKVKKNDFSICRYIQSTIRFLWDAYNVDESNDPTALVVSMSYKEHWNEIADLWFLGMQ 180
            Q+ KVK+NDFSICRYIQ+TIRFLWDAYN+DESNDPTALVVS++YK +W+++++LWFLGMQ
Sbjct: 577  QSKKVKQNDFSICRYIQATIRFLWDAYNIDESNDPTALVVSIAYKGYWSDLSELWFLGMQ 636

Query: 181  TMSGVLTIVPWISEFAIESGWAGGIIEMLVKVKIGTLAPNVKSAFEDFLCRLVDSNESVI 360
            TM GVL +VPW+SEFA+ESGWA GI++ L KVKIGTL  NVKSA+EDFL +LVD N  V 
Sbjct: 637  TMCGVLPLVPWLSEFALESGWAEGIVKTLKKVKIGTLPANVKSAYEDFLSQLVDVNGDVQ 696

Query: 361  PVLKKAGALKMCRNHRLMDLGKKLFGD 441
             VLKKA AL++CRNHR+MDLGKKLFGD
Sbjct: 697  AVLKKADALRVCRNHRMMDLGKKLFGD 723


>Y14999-1|CAB40628.1| 1408|Drosophila melanogaster Bip2 protein
           protein.
          Length = 1408

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 14/39 (35%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = -2

Query: 329 QRKSSKA-DLTFGASVPILTFTSISIIPPAQPLSIANSD 216
           ++KSS+A  L   +S  I+T +S+++ PP +PL++ N++
Sbjct: 604 RKKSSQAITLPLSSSPMIITQSSLNVSPPTEPLNLCNTE 642


>AY061276-1|AAL28824.1|  681|Drosophila melanogaster LD19767p
           protein.
          Length = 681

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 14/39 (35%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = -2

Query: 329 QRKSSKA-DLTFGASVPILTFTSISIIPPAQPLSIANSD 216
           ++KSS+A  L   +S  I+T +S+++ PP +PL++ N++
Sbjct: 260 RKKSSQAITLPLSSSPMIITQSSLNVSPPTEPLNLCNTE 298


>AJ292191-1|CAC34474.1| 1408|Drosophila melanogaster TAFII155
           protein protein.
          Length = 1408

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 14/39 (35%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = -2

Query: 329 QRKSSKA-DLTFGASVPILTFTSISIIPPAQPLSIANSD 216
           ++KSS+A  L   +S  I+T +S+++ PP +PL++ N++
Sbjct: 604 RKKSSQAITLPLSSSPMIITQSSLNVSPPTEPLNLCNTE 642


>AJ251945-1|CAB64265.1| 1406|Drosophila melanogaster BIP2 protein
           protein.
          Length = 1406

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 14/39 (35%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = -2

Query: 329 QRKSSKA-DLTFGASVPILTFTSISIIPPAQPLSIANSD 216
           ++KSS+A  L   +S  I+T +S+++ PP +PL++ N++
Sbjct: 604 RKKSSQAITLPLSSSPMIITQSSLNVSPPTEPLNLCNTE 642


>AE014135-85|AAF59342.1| 1406|Drosophila melanogaster CG2009-PA
           protein.
          Length = 1406

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 14/39 (35%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
 Frame = -2

Query: 329 QRKSSKA-DLTFGASVPILTFTSISIIPPAQPLSIANSD 216
           ++KSS+A  L   +S  I+T +S+++ PP +PL++ N++
Sbjct: 604 RKKSSQAITLPLSSSPMIITQSSLNVSPPTEPLNLCNTE 642


>BT022986-1|AAY55402.1|  240|Drosophila melanogaster IP08456p
           protein.
          Length = 240

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +1

Query: 106 TALVVSMSYKEHWNEIADLWF----LGMQ-TMSGVLTIVPWISEFAIESGWAGGIIEMLV 270
           TALVV  +YK   N+IA LW     L ++ T   + T  P  +E+   +GW   ++E  V
Sbjct: 86  TALVVHENYKNWDNDIALLWLEKPVLSVRVTKIPLATKEPSENEYPSNAGWGEKLLESYV 145


>AY060440-1|AAL25479.1|   91|Drosophila melanogaster LD47115p
           protein.
          Length = 91

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +1

Query: 70  WDAYNVDESNDPTALVVSMSYKEHWNEIADL 162
           W  + VD+S   + +++  SY ++WN I  +
Sbjct: 57  WPLFGVDQSEFGSLILIKNSYLQNWNSICSI 87


>AE014134-382|AAF51273.1|  242|Drosophila melanogaster CG4271-PA
           protein.
          Length = 242

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +1

Query: 106 TALVVSMSYKEHWNEIADLWF----LGMQ-TMSGVLTIVPWISEFAIESGWAGGIIEMLV 270
           TALVV  +YK   N+IA LW     L ++ T   + T  P  +E+   +GW   ++E  V
Sbjct: 88  TALVVHENYKNWDNDIALLWLEKPVLSVRVTKIPLATKEPSENEYPSNAGWGEKLLESYV 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,022,716
Number of Sequences: 53049
Number of extensions: 437261
Number of successful extensions: 1163
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)