Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31540
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067936-3|AAC19216.2| 922|Caenorhabditis elegans Hypothetical ... 28 3.4
U80454-7|ABC48245.1| 650|Caenorhabditis elegans Hypothetical pr... 28 4.6
AF000266-11|AAC71175.1| 112|Caenorhabditis elegans Hypothetical... 28 4.6
U61952-2|AAB03160.1| 509|Caenorhabditis elegans Cytochrome p450... 27 6.0
U41025-2|AAM51507.2| 356|Caenorhabditis elegans Hypothetical pr... 27 8.0
U41025-1|AAM51508.1| 407|Caenorhabditis elegans Hypothetical pr... 27 8.0
U11029-2|AAA19242.2| 432|Caenorhabditis elegans Cam kinase kina... 27 8.0
U11029-1|AAZ82849.1| 512|Caenorhabditis elegans Cam kinase kina... 27 8.0
AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 27 8.0
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 27 8.0
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 27 8.0
AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical ... 27 8.0
AB016838-1|BAA77824.4| 432|Caenorhabditis elegans Ca2+/calmodul... 27 8.0
>AF067936-3|AAC19216.2| 922|Caenorhabditis elegans Hypothetical
protein C24G6.3 protein.
Length = 922
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 268 VKVKIGTLAPNVKSAFEDFLCRLVDSNES 354
+K K+ APN SAFE FL + S ES
Sbjct: 699 IKAKLLRNAPNSLSAFEQFLTNISGSTES 727
>U80454-7|ABC48245.1| 650|Caenorhabditis elegans Hypothetical
protein T16A1.1a protein.
Length = 650
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 148 HSSVPYSSWTQLKQSDHLIHLHCMHP 71
H +P+ Q KQ L+HLHC P
Sbjct: 586 HCEIPWRISAQRKQQRILLHLHCDKP 611
>AF000266-11|AAC71175.1| 112|Caenorhabditis elegans Hypothetical
protein W08F4.11 protein.
Length = 112
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 451 YLIKFYFS*KGNNVVFSIY 507
YLI+ YFS GN+ VFS Y
Sbjct: 5 YLIRNYFSISGNSPVFSFY 23
>U61952-2|AAB03160.1| 509|Caenorhabditis elegans Cytochrome p450
family protein 33E2 protein.
Length = 509
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +1
Query: 46 IQSTIRFLWDAYNVDESNDPTALVVSMSYKEHWNEIADLWFLGMQTMSGVLTIVPWISEF 225
+ S I L Y DE+N L + H+ L + + G++ + PW+ F
Sbjct: 172 VGSVINNLLFGYRYDETNIAEFLDLKEKLNNHFQ-------LAAKPIGGLIGMNPWLGYF 224
Query: 226 AIESGWAGGIIEMLV 270
SG+ G+ LV
Sbjct: 225 PYFSGYKNGLFYELV 239
>U41025-2|AAM51507.2| 356|Caenorhabditis elegans Hypothetical
protein C01C4.3a protein.
Length = 356
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 7 NKVKKNDFSICRYIQSTIRFLWDAYNVDESNDPTALVVSMSYKEHWNEIADLWFLGMQTM 186
+KVK DF + R + +T+++L N + +V + K N+ D+W LG+
Sbjct: 153 SKVKVTDFGLTRKVDTTVKYLEYVNNYHAAELCDTVV---NEKLVVNKSTDIWALGIIFF 209
Query: 187 SGVLTIVPW 213
+ PW
Sbjct: 210 YCMKGKFPW 218
>U41025-1|AAM51508.1| 407|Caenorhabditis elegans Hypothetical
protein C01C4.3b protein.
Length = 407
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 7 NKVKKNDFSICRYIQSTIRFLWDAYNVDESNDPTALVVSMSYKEHWNEIADLWFLGMQTM 186
+KVK DF + R + +T+++L N + +V + K N+ D+W LG+
Sbjct: 266 SKVKVTDFGLTRKVDTTVKYLEYVNNYHAAELCDTVV---NEKLVVNKSTDIWALGIIFF 322
Query: 187 SGVLTIVPW 213
+ PW
Sbjct: 323 YCMKGKFPW 331
>U11029-2|AAA19242.2| 432|Caenorhabditis elegans Cam kinase kinase
protein 1, isoforma protein.
Length = 432
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 332 LQRKSSKADLTFGASVPILTFTSISIIPPAQPLSIANSDIQGTIVNTPLIVCIPRN 165
L +SS D +SV T+ + PP P + +N+++ T V+ P I CI N
Sbjct: 360 LSAQSSIRDRRKSSSVKDPTY----VPPPNSPPATSNNNLNSTKVDRPEIKCIEMN 411
>U11029-1|AAZ82849.1| 512|Caenorhabditis elegans Cam kinase kinase
protein 1, isoformb protein.
Length = 512
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 332 LQRKSSKADLTFGASVPILTFTSISIIPPAQPLSIANSDIQGTIVNTPLIVCIPRN 165
L +SS D +SV T+ + PP P + +N+++ T V+ P I CI N
Sbjct: 440 LSAQSSIRDRRKSSSVKDPTY----VPPPNSPPATSNNNLNSTKVDRPEIKCIEMN 491
>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
protein F33H12.6 protein.
Length = 1360
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 169 GTINLQFHSSVPYSSWTQLKQSDHLIHLHCMHPKET**LIEYIYK 35
GT +L VPY+ W L+ + H+ C + L +Y+YK
Sbjct: 577 GTQHLDNRRVVPYNKWLLLRYNAHMNVEICGFIEAVKYLFKYVYK 621
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 169 GTINLQFHSSVPYSSWTQLKQSDHLIHLHCMHPKET**LIEYIYK 35
GT +L VPY+ W L+ + H+ C + L +Y+YK
Sbjct: 683 GTQHLDNRRVVPYNKWLLLRYNAHMNVEICGFIEAVKYLFKYVYK 727
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 169 GTINLQFHSSVPYSSWTQLKQSDHLIHLHCMHPKET**LIEYIYK 35
GT +L VPY+ W L+ + H+ C + L +Y+YK
Sbjct: 683 GTQHLDNRRVVPYNKWLLLRYNAHMNVEICGFIEAVKYLFKYVYK 727
>AC006648-1|AAF39854.1| 1486|Caenorhabditis elegans Hypothetical
protein F59H6.5 protein.
Length = 1486
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 169 GTINLQFHSSVPYSSWTQLKQSDHLIHLHCMHPKET**LIEYIYK 35
GT +L VPY+ W L+ + H+ C + L +Y+YK
Sbjct: 683 GTQHLDNRRVVPYNKWLLLRYNAHMNVEICGFIEAVKYLFKYVYK 727
>AB016838-1|BAA77824.4| 432|Caenorhabditis elegans
Ca2+/calmodulin-dependent proteinkinase kinase protein.
Length = 432
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -2
Query: 332 LQRKSSKADLTFGASVPILTFTSISIIPPAQPLSIANSDIQGTIVNTPLIVCIPRN 165
L +SS D +SV T+ + PP P + +N+++ T V+ P I CI N
Sbjct: 360 LSAQSSIRDRRKSSSVKDPTY----VPPPNSPPATSNNNLNSTKVDRPEIKCIEMN 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,828,528
Number of Sequences: 27780
Number of extensions: 244025
Number of successful extensions: 592
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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