Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31539
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 173 5e-44
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 173 5e-44
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 173 5e-44
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 172 1e-43
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 172 1e-43
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 169 1e-42
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 169 1e-42
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 169 1e-42
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 169 1e-42
AC024859-24|ABD63210.1| 483|Caenorhabditis elegans Hypothetical... 33 0.16
U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,... 28 3.4
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo... 28 4.6
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo... 28 4.6
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo... 28 4.6
Z71266-1|CAA95839.1| 945|Caenorhabditis elegans Hypothetical pr... 27 8.0
U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 173 bits (422), Expect = 5e-44
Identities = 82/109 (75%), Positives = 94/109 (86%)
Frame = -2
Query: 515 GKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSD 336
GKLTGMAFRVP +VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL YTEDQVVS+D
Sbjct: 232 GKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTD 291
Query: 335 FIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 189
F+ D HSSIFDA A ISLN NFVKL+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 292 FVSDPHSSIFDAGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIATR 340
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 173 bits (422), Expect = 5e-44
Identities = 82/109 (75%), Positives = 94/109 (86%)
Frame = -2
Query: 515 GKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSD 336
GKLTGMAFRVP +VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL YTEDQVVS+D
Sbjct: 232 GKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTD 291
Query: 335 FIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 189
F+ D HSSIFDA A ISLN NFVKL+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 292 FVSDPHSSIFDAGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIATR 340
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 173 bits (422), Expect = 5e-44
Identities = 82/109 (75%), Positives = 94/109 (86%)
Frame = -2
Query: 515 GKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSD 336
GKLTGMAFRVP +VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL YTEDQVVS+D
Sbjct: 232 GKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTD 291
Query: 335 FIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 189
F+ D HSSIFDA A ISLN NFVKL+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 292 FVSDPHSSIFDAGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIATR 340
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 172 bits (418), Expect = 1e-43
Identities = 81/109 (74%), Positives = 93/109 (85%)
Frame = -2
Query: 515 GKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSD 336
GKLTGMAFRVP +VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL YTEDQVVS+D
Sbjct: 232 GKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTD 291
Query: 335 FIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 189
F+ D HSSIFD A ISLN NFVKL+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 292 FVSDPHSSIFDTGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIATR 340
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 172 bits (418), Expect = 1e-43
Identities = 81/109 (74%), Positives = 93/109 (85%)
Frame = -2
Query: 515 GKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSD 336
GKLTGMAFRVP +VSVVDLTVRL KPAS + IK+ VK AA+GP+KGIL YTEDQVVS+D
Sbjct: 232 GKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTD 291
Query: 335 FIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 189
F+ D HSSIFD A ISLN NFVKL+SWYDNEYGYS+RV+DLI YI ++
Sbjct: 292 FVSDPHSSIFDTGACISLNPNFVKLVSWYDNEYGYSNRVVDLIGYIATR 340
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 169 bits (411), Expect = 1e-42
Identities = 78/109 (71%), Positives = 94/109 (86%)
Frame = -2
Query: 515 GKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSD 336
GKLTGMAFRVP +VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL YTEDQVVS+D
Sbjct: 232 GKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTD 291
Query: 335 FIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 189
F+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 292 FVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 169 bits (411), Expect = 1e-42
Identities = 78/109 (71%), Positives = 94/109 (86%)
Frame = -2
Query: 515 GKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSD 336
GKLTGMAFRVP +VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL YTEDQVVS+D
Sbjct: 232 GKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTD 291
Query: 335 FIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 189
F+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 292 FVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 169 bits (411), Expect = 1e-42
Identities = 78/109 (71%), Positives = 94/109 (86%)
Frame = -2
Query: 515 GKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSD 336
GKLTGMAFRVP +VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL YTEDQVVS+D
Sbjct: 232 GKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTD 291
Query: 335 FIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 189
F+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 292 FVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 169 bits (411), Expect = 1e-42
Identities = 78/109 (71%), Positives = 94/109 (86%)
Frame = -2
Query: 515 GKLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKGILGYTEDQVVSSD 336
GKLTGMAFRVP +VSVVDLT RL KPAS + IK+ +K AA+GP+KGIL YTEDQVVS+D
Sbjct: 232 GKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTD 291
Query: 335 FIGDSHSSIFDAAAGISLNDNFVKLISWYDNEYGYSSRVIDLIKYIQSK 189
F+ D++SSIFDA A ISLN +FVKL+SWYDNE+GYS+RV+DLI YI +K
Sbjct: 292 FVSDTNSSIFDAGASISLNPHFVKLVSWYDNEFGYSNRVVDLISYIATK 340
>AC024859-24|ABD63210.1| 483|Caenorhabditis elegans Hypothetical
protein Y71H2AM.3 protein.
Length = 483
Score = 32.7 bits (71), Expect = 0.16
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -2
Query: 473 VSVVDLTVRLGKPASYEAIKQKVKEAAEGPL 381
V+V D +R+G P + EA+ ++ KEAA GP+
Sbjct: 62 VNVTDNYIRIGAPPTPEALIKREKEAANGPM 92
>U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,
class iii (c) protein1 protein.
Length = 1400
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -2
Query: 428 YEAIKQKVKEAAEGPLKGILGYTEDQVVSSDFIGDSHSSIFDAAAGISLND 276
Y Q +KE EG LK G TE++ + S + + S+I D A + L +
Sbjct: 717 YSKCSQYIKELEEGKLKAQPGCTEEETLESIILREL-STIRDHAGQVCLRN 766
>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-5 protein.
Length = 2238
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 413 QKVKEAAEGPLKGILGYTEDQVVSSDFIG 327
QK++ E P++ +L Y ++ VSS+ IG
Sbjct: 1374 QKIETPTENPIRSLLIYMNEKSVSSEAIG 1402
>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform a protein.
Length = 2276
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 413 QKVKEAAEGPLKGILGYTEDQVVSSDFIG 327
QK++ E P++ +L Y ++ VSS+ IG
Sbjct: 1412 QKIETPTENPIRSLLIYMNEKSVSSEAIG 1440
>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
metabolism enzymeprotein 5, isoform b protein.
Length = 2238
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 413 QKVKEAAEGPLKGILGYTEDQVVSSDFIG 327
QK++ E P++ +L Y ++ VSS+ IG
Sbjct: 1374 QKIETPTENPIRSLLIYMNEKSVSSEAIG 1402
>Z71266-1|CAA95839.1| 945|Caenorhabditis elegans Hypothetical
protein R06C7.1 protein.
Length = 945
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 512 KLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKG-ILGYTEDQVVSSD 336
KL G+ + V A S+ D + +G S K +G L I+G+ + V + +
Sbjct: 654 KLGGLNYTVSDAKKSMTDEQLIIGVGVSAPPAGTKYMMDNKGHLNPQIIGFASNAVANHE 713
Query: 335 FIGD 324
F+GD
Sbjct: 714 FVGD 717
>U29244-3|AAC71088.1| 363|Caenorhabditis elegans Hypothetical
protein ZK1248.7 protein.
Length = 363
Score = 27.1 bits (57), Expect = 8.0
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -2
Query: 512 KLTGMAFRVPVANVSVVDLTVRLGKPASYEAIKQKVKEAAEGPLKG-ILGYTEDQVVSSD 336
KL G+ + V A S+ D + +G S K +G L I+G+ + V + +
Sbjct: 98 KLGGLNYTVSDAKKSMTDEQLIIGVGVSAPPAGTKYMMDNKGHLNPQIIGFASNAVANHE 157
Query: 335 FIGD 324
F+GD
Sbjct: 158 FVGD 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,785,214
Number of Sequences: 27780
Number of extensions: 177869
Number of successful extensions: 421
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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