Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31537
(500 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56| Best HMM Match : Actin (HMM E-Value=0) 347 4e-96
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 347 4e-96
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 346 7e-96
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 343 5e-95
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 243 6e-65
SB_54| Best HMM Match : Actin (HMM E-Value=0) 219 1e-57
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 217 6e-57
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 204 3e-53
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 204 4e-53
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 171 2e-43
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 105 2e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 80 9e-16
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 67 7e-12
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 2e-05
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 40 0.001
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 32 0.23
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.71
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.93
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 2.8
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 5.0
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 27 6.6
SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54) 27 6.6
SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 27 6.6
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 27 8.7
SB_6273| Best HMM Match : MAM (HMM E-Value=0) 27 8.7
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 347 bits (852), Expect = 4e-96
Identities = 161/164 (98%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 225
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 347 bits (852), Expect = 4e-96
Identities = 161/164 (98%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 346 bits (850), Expect = 7e-96
Identities = 160/164 (97%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLA 182
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 343 bits (843), Expect = 5e-95
Identities = 160/164 (97%), Positives = 163/164 (99%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQ
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQ 225
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 243 bits (595), Expect = 6e-65
Identities = 126/164 (76%), Positives = 130/164 (79%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV------ 164
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 165 ---------PIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 199
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 219 bits (535), Expect = 1e-57
Identities = 97/142 (68%), Positives = 121/142 (85%)
Frame = +2
Query: 74 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 253
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 254 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 433
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 434 AEREIVRDIKEKLCYVALDFEQ 499
AE++I+RD+KE LCY A+D+E+
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYER 2270
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 217 bits (529), Expect = 6e-57
Identities = 103/111 (92%), Positives = 108/111 (97%)
Frame = +2
Query: 167 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 346
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 347 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 188
Score = 60.1 bits (139), Expect = 1e-09
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTF 94
RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 204 bits (498), Expect = 3e-53
Identities = 90/165 (54%), Positives = 123/165 (74%), Gaps = 1/165 (0%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 184
R +L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM
Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMI 124
Query: 185 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 364
++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+
Sbjct: 125 EVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDI 184
Query: 365 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
AGRD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQ
Sbjct: 185 AGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQ 229
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 204 bits (497), Expect = 4e-53
Identities = 96/104 (92%), Positives = 100/104 (96%)
Frame = +2
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF Q
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQ 104
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 171 bits (417), Expect = 2e-43
Identities = 74/116 (63%), Positives = 101/116 (87%)
Frame = +2
Query: 122 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 301
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 302 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 469
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 105 bits (253), Expect = 2e-23
Identities = 48/126 (38%), Positives = 80/126 (63%)
Frame = +2
Query: 32 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 211
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 212 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 391
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 392 MKILTE 409
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 80.2 bits (189), Expect = 9e-16
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Frame = +2
Query: 233 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 409
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 410 RGYSFTTTAEREIVRDIKEKLCYVALD 490
RG++FT+++ +IV DIKEK+CY++ D
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKD 853
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 67.3 bits (157), Expect = 7e-12
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Frame = +2
Query: 227 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 382
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 383 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 490
++ ++L ER E + IKE+ Y+ D
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKERWGYICPD 135
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 45.6 bits (103), Expect = 2e-05
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 26 KYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 139
K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.23
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 269 TGIVLDSGDGVSHTVPI 319
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Frame = +2
Query: 32 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 211
P + G + NWD ++IW +TF E + M +I+FE +N
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEILFEEYNF 331
Query: 212 PAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 355
A+ A LS Y S +V+D+G +H VP++ G + A+ R
Sbjct: 332 KALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVRR 385
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 77 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 256
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 257 SGRTTGIV 280
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 32.3 bits (70), Expect = 0.23
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = -2
Query: 445 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 278
F +SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 277 DTGGTTGGVQ 248
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.53
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 23 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 175
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 0.71
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 164 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 280
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 0.93
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 409 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 266
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 369 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 190
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 189 IWVIFSLLALGLR 151
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -2
Query: 352 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 254
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 167 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 316
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 152 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 280
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 5.0
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -3
Query: 318 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 142
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 141 VSSTGCSSGATRSSL*KVW 85
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 27.5 bits (58), Expect = 6.6
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = -2
Query: 184 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTS 8
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D S
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNS 212
>SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54)
Length = 214
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -2
Query: 499 LLEVEGDIAELLLDVTNDFPLSGGGERVTPLGEDLHEVVGQVATSQ-VQT 353
+LEV+ + + L D+ ND+PL+ G +V + L E ++AT +QT
Sbjct: 35 ILEVDLEYPKSLYDLHNDYPLAAG--KVNVSKDMLSEYCDKIATKYGIQT 82
>SB_31099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.5 bits (58), Expect = 6.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = -3
Query: 243 STAWMATYMAGELKVSNMIWV---IFSLLALGL 154
S AW+ + + EL+ S +WV IFS+L +G+
Sbjct: 163 SVAWLCSLLYLELEASLYVWVPSLIFSILIIGV 195
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +1
Query: 295 WCLPHRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS 453
WC H+ R PR P G WS PH++ + L H H G S
Sbjct: 352 WCAKHQ---ERSHQQPRQPDQGQSWS-----PHKE-YNVTFLHHRHHPTGQSS 395
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 27.1 bits (57), Expect = 8.7
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -2
Query: 457 VTNDFPLSGGGE-RVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVE 281
V++D + E RV+ G + +G+V+ +DGVG+ D GVGD +G
Sbjct: 88 VSDDGGVGDNAEGRVSDDGGVGDDAIGRVSDDGGVGDDGVGR---VSDNGGVGDDANGRV 144
Query: 280 HDTGG 266
D GG
Sbjct: 145 SDDGG 149
>SB_6273| Best HMM Match : MAM (HMM E-Value=0)
Length = 4272
Score = 27.1 bits (57), Expect = 8.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 303 PTPYPSTKVTLCPTPSSVW 359
PTP+P+T V +P S+W
Sbjct: 1373 PTPFPTTPVPPTTSPPSIW 1391
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,493,317
Number of Sequences: 59808
Number of extensions: 259230
Number of successful extensions: 1062
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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