Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31537
(500 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 346 5e-96
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 346 5e-96
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 346 6e-96
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 346 6e-96
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 346 6e-96
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 346 6e-96
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 346 6e-96
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 346 6e-96
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 346 6e-96
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 346 6e-96
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 332 1e-91
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 229 9e-61
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 210 4e-55
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 161 3e-40
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 118 3e-27
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 66 2e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 66 2e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 60 9e-10
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 56 1e-08
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 56 1e-08
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 56 1e-08
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 51 5e-07
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.27
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.36
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 31 0.47
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 7.6
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 7.6
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 7.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 346 bits (851), Expect = 5e-96
Identities = 161/164 (98%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 346 bits (851), Expect = 5e-96
Identities = 161/164 (98%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 346 bits (850), Expect = 6e-96
Identities = 160/164 (97%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 346 bits (850), Expect = 6e-96
Identities = 160/164 (97%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 346 bits (850), Expect = 6e-96
Identities = 160/164 (97%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 346 bits (850), Expect = 6e-96
Identities = 160/164 (97%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 346 bits (850), Expect = 6e-96
Identities = 160/164 (97%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 346 bits (850), Expect = 6e-96
Identities = 160/164 (97%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 19 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 78
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 79 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 138
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 139 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 182
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 346 bits (850), Expect = 6e-96
Identities = 160/164 (97%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 49 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 108
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 109 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 168
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 169 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 212
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 346 bits (850), Expect = 6e-96
Identities = 160/164 (97%), Positives = 164/164 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 226
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 332 bits (815), Expect = 1e-91
Identities = 152/163 (93%), Positives = 160/163 (98%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLA
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLA 181
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 496
GRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE
Sbjct: 182 GRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFE 224
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 229 bits (560), Expect = 9e-61
Identities = 100/162 (61%), Positives = 131/162 (80%), Gaps = 1/162 (0%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 184
RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+
Sbjct: 65 RGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSA 124
Query: 185 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 364
+I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DL
Sbjct: 125 EIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDL 184
Query: 365 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 490
AGRD+T+YL +L GY F + E EIVR++KE CY+ALD
Sbjct: 185 AGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD 226
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 210 bits (513), Expect = 4e-55
Identities = 94/165 (56%), Positives = 126/165 (76%), Gaps = 1/165 (0%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMT 184
R +L + YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM
Sbjct: 65 RQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMF 124
Query: 185 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDL 364
Q+MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+
Sbjct: 125 QVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDI 184
Query: 365 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
AGRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQ
Sbjct: 185 AGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQ 229
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 161 bits (391), Expect = 3e-40
Identities = 74/165 (44%), Positives = 105/165 (63%), Gaps = 8/165 (4%)
Frame = +2
Query: 20 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 199
T+KYPI HGI+ +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 200 TFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILR 355
+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I
Sbjct: 140 SFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKH 199
Query: 356 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 490
+ +AGRD+T ++ +L +R ++ E+ + IKEK CYV D
Sbjct: 200 IPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPD 244
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 118 bits (283), Expect = 3e-27
Identities = 52/126 (41%), Positives = 85/126 (67%)
Frame = +2
Query: 35 IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 214
++ G+I +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 215 AMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM 394
A Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T+ L
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLA 213
Query: 395 KILTER 412
++L ++
Sbjct: 214 QMLDQQ 219
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 65.7 bits (153), Expect = 2e-11
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 4/160 (2%)
Frame = +2
Query: 32 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 211
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 212 PAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 379
++ + L S + +V+DSG + G + +++R+D+ G+ L
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKAL 180
Query: 380 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
T+ L ++ R + E ++ + KE LC+V+ +F++
Sbjct: 181 TNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDE 218
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 65.7 bits (153), Expect = 2e-11
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 4/160 (2%)
Frame = +2
Query: 32 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 211
PIE G + NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGF 120
Query: 212 PAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 379
++ + L S + +V+DSG + G + +++R+D+ G+ L
Sbjct: 121 TEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKAL 180
Query: 380 TDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
T+ L ++ R + E ++ + KE LC+V+ +F++
Sbjct: 181 TNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDE 218
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 60.1 bits (139), Expect = 9e-10
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Frame = +2
Query: 101 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 280
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 281 LDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIV 451
+D G+ V + VP+ +GY + AI + + + D L L+ Y+F + E+ I+
Sbjct: 326 VDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL 384
Query: 452 RDIKEKLCYVALDFEQ 499
R E+ YV D+++
Sbjct: 385 RFALEQTTYVPEDYQK 400
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 56.4 bits (130), Expect = 1e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKI 79
RGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 56.4 bits (130), Expect = 1e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKI 79
RGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 56.4 bits (130), Expect = 1e-08
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKI 79
RGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 50.8 bits (116), Expect = 5e-07
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDM 70
RGILTLKYPIEHGI+TNWDDM
Sbjct: 63 RGILTLKYPIEHGIVTNWDDM 83
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.27
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 300 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 205
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -2
Query: 445 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 311
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 31.1 bits (67), Expect = 0.47
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +2
Query: 50 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF-ETFNSPAMYV 226
+ + D + K W T + L + + + PL+ K+ K T I + ET + +
Sbjct: 203 LNHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKSKGIKTTTINYQETAHEKIVET 261
Query: 227 AIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 319
AI A L LY+ G+ +D GD + VPI
Sbjct: 262 AIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 409 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 308
+GED V+G V S T GVG S + D G
Sbjct: 75 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 108
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 409 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 308
+GED V+G V S T GVG S + D G
Sbjct: 172 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 205
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 409 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 308
+GED V+G V S T GVG S + D G
Sbjct: 296 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,646,017
Number of Sequences: 27780
Number of extensions: 184062
Number of successful extensions: 757
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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