Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31537
(500 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 340 4e-94
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 340 4e-94
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 338 9e-94
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 338 2e-93
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 336 4e-93
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 334 2e-92
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 333 3e-92
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 333 3e-92
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 333 3e-92
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 315 9e-87
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 299 7e-82
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 279 6e-76
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 206 6e-54
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 151 3e-37
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 123 6e-29
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 105 1e-23
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 93 1e-19
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 79 1e-15
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 67 5e-12
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 67 5e-12
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 3e-10
At5g43500.2 68418.m05318 expressed protein 36 0.020
At5g43500.1 68418.m05319 expressed protein 36 0.020
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 1.8
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 1.8
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 29 1.8
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 2.3
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 2.3
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.3
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.3
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 4.1
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 27 5.4
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 7.1
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 27 7.1
At3g15400.1 68416.m01954 anther development protein, putative si... 27 7.1
At2g39480.1 68415.m04845 ABC transporter family protein related ... 27 7.1
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 7.1
At5g35830.1 68418.m04305 ankyrin repeat family protein contains ... 27 9.4
At3g28790.1 68416.m03593 expressed protein 27 9.4
At1g69670.1 68414.m08018 cullin, putative contains similarity to... 27 9.4
At1g26830.1 68414.m03270 cullin, putative similar to Cullin homo... 27 9.4
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 340 bits (835), Expect = 4e-94
Identities = 157/164 (95%), Positives = 162/164 (98%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQ
Sbjct: 64 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQ 123
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQ
Sbjct: 184 GRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQ 227
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 340 bits (835), Expect = 4e-94
Identities = 157/164 (95%), Positives = 162/164 (98%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQ
Sbjct: 64 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQ 123
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQ
Sbjct: 184 GRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQ 227
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 338 bits (832), Expect = 9e-94
Identities = 156/164 (95%), Positives = 163/164 (99%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 64 RGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 123
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGYSFTT+AEREIVRD+KEKL Y+ALD+EQ
Sbjct: 184 GRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQ 227
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 338 bits (830), Expect = 2e-93
Identities = 157/164 (95%), Positives = 162/164 (98%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 64 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 123
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALDFEQ
Sbjct: 184 GRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQ 227
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 336 bits (827), Expect = 4e-93
Identities = 156/164 (95%), Positives = 162/164 (98%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 64 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 123
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQ
Sbjct: 184 GRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQ 227
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 334 bits (821), Expect = 2e-92
Identities = 157/164 (95%), Positives = 160/164 (97%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 64 RGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 123
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTD LMKILTERGY FTTTAEREIVRDIKEKL YVALD+EQ
Sbjct: 184 GRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQ 227
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 333 bits (819), Expect = 3e-92
Identities = 153/164 (93%), Positives = 162/164 (98%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 64 RGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQ 123
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLA
Sbjct: 124 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQ
Sbjct: 184 GRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQ 227
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 333 bits (819), Expect = 3e-92
Identities = 153/164 (93%), Positives = 162/164 (98%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 64 RGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQ 123
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLA
Sbjct: 124 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQ
Sbjct: 184 GRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQ 227
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 333 bits (819), Expect = 3e-92
Identities = 153/164 (93%), Positives = 162/164 (98%)
Frame = +2
Query: 8 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 187
RGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 64 RGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQ 123
Query: 188 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLA
Sbjct: 124 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
GRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQ
Sbjct: 184 GRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQ 227
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 315 bits (774), Expect = 9e-87
Identities = 140/166 (84%), Positives = 158/166 (95%)
Frame = +2
Query: 2 AXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 181
A RGIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKM
Sbjct: 63 ARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKM 122
Query: 182 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 361
TQIMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD
Sbjct: 123 TQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 182
Query: 362 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
LAGRDLT+YL KI+ ERGY++TT+AEREIVRDIKEKLCY+A+D+EQ
Sbjct: 183 LAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYIAVDYEQ 228
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 299 bits (734), Expect = 7e-82
Identities = 135/166 (81%), Positives = 154/166 (92%)
Frame = +2
Query: 2 AXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 181
A R ILTLK P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKM
Sbjct: 51 ANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKM 110
Query: 182 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 361
TQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLD
Sbjct: 111 TQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLD 170
Query: 362 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
L GRDLTDYL++I+TERGY++TT+AEREIVRDIKEKLCYVALD+EQ
Sbjct: 171 LGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCYVALDYEQ 216
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 279 bits (685), Expect = 6e-76
Identities = 130/166 (78%), Positives = 149/166 (89%)
Frame = +2
Query: 2 AXRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 181
A GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKM
Sbjct: 17 ARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKM 76
Query: 182 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 361
TQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLD
Sbjct: 77 TQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLD 136
Query: 362 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
LAGR LT+YLMKI+ ERGY T+AERE+VRDIKE+ Y+ALD+EQ
Sbjct: 137 LAGRHLTNYLMKIMMERGY---TSAEREVVRDIKEQFGYIALDYEQ 179
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 206 bits (503), Expect = 6e-54
Identities = 84/161 (52%), Positives = 121/161 (75%)
Frame = +2
Query: 17 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 196
L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 197 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 376
E +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR
Sbjct: 126 EKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRH 185
Query: 377 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 499
+T YL+ +L+ RGY+ TA+ E VR+IKEKLCY++ D+++
Sbjct: 186 ITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKR 226
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 151 bits (365), Expect = 3e-37
Identities = 68/161 (42%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Frame = +2
Query: 23 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 202
L YPIEHG + +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 203 FNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 367
FN P +Y+A+ +VL+L A T TG+V+D GDG +H VP+ EGY + I + +A
Sbjct: 146 FNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIA 205
Query: 368 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 490
G+D+T ++ +++ ERG + ++ R +KE CY D
Sbjct: 206 GKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSD 246
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 123 bits (297), Expect = 6e-29
Identities = 54/128 (42%), Positives = 83/128 (64%)
Frame = +2
Query: 32 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 211
PI+ GI+++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 212 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 391
PA+++A VL+ +A+GR T +V+D G G + P+++GY L A++ L G LTD L
Sbjct: 154 PALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCL 213
Query: 392 MKILTERG 415
+K L +G
Sbjct: 214 LKSLESKG 221
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 105 bits (253), Expect = 1e-23
Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 10/166 (6%)
Frame = +2
Query: 23 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 202
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 203 FNSPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAIL 352
F ++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIK 180
Query: 353 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 490
R+DL G+ T+YL ++++ R S E +V D KEKLC+V+LD
Sbjct: 181 RIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLD 224
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 93.1 bits (221), Expect = 1e-19
Identities = 57/154 (37%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Frame = +2
Query: 32 PIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 208
PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 209 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 388
Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +LT
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKL 176
Query: 389 LMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 490
+ L + S + V +KE+ A D
Sbjct: 177 FAQELGKTNPSMNLSMSD--VEKLKEQYANCAED 208
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 79.4 bits (187), Expect = 1e-15
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Frame = +2
Query: 32 PIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 208
P + ++ ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 209 SPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 373
PA+ + A S L+ + GIVL G +H++P +G + R ++ G
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGY 204
Query: 374 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDF 493
+TDYL ++L+ + ++ E D+K + CY+A D+
Sbjct: 205 HVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLEHCYIAPDY 244
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 67.3 bits (157), Expect = 5e-12
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Frame = +2
Query: 89 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 238
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 239 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 415
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 416 YSFTTTAEREIVRDIKEKLCYVALDFE 496
SF + VR +KEKLCYVALD++
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYK 324
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 67.3 bits (157), Expect = 5e-12
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Frame = +2
Query: 89 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 238
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 239 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 415
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 416 YSFTTTAEREIVRDIKEKLCYVALDFE 496
SF + VR +KEKLCYVALD++
Sbjct: 301 ISFQSL---YTVRTLKEKLCYVALDYK 324
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 61.7 bits (143), Expect = 3e-10
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 32 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 178
P + GI+T+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.5 bits (78), Expect = 0.020
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +2
Query: 125 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 304
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 305 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 400
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.5 bits (78), Expect = 0.020
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +2
Query: 125 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 304
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 305 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 400
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 439 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 311
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 184 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 77
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -2
Query: 196 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 71
+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 307 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 423
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 307 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 423
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 17 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 178
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +2
Query: 17 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 178
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 4.1
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -3
Query: 327 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 151
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 150 GASVSST---GCSSGAT 109
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 27.5 bits (58), Expect = 5.4
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 196 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 71
+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.1 bits (57), Expect = 7.1
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +2
Query: 56 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 235
NW +E + + + P LL EA + PK+ E Q +++TF + + +
Sbjct: 494 NWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPK 553
Query: 236 AVLSLYASGRTTGIVLDSGD 295
+ +A G V D
Sbjct: 554 LSRTSFAISHYAGEVTYQAD 573
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 374 DLTDYL-MKILTERGYSFTTTAEREI-VRDIKEKLCY 478
D TD + +KI + T + ER I VRD+K+ +CY
Sbjct: 6 DFTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICY 42
>At3g15400.1 68416.m01954 anther development protein, putative
similar to anther development protein ATA20 GB:AAC50042
GI:2708813 from [Arabidopsis thaliana]
Length = 416
Score = 27.1 bits (57), Expect = 7.1
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = -2
Query: 436 SGGGERVTPLGEDLHEVVGQVATSQVQTEDG--VGQSVTFVDGYGVGDTISGVEHDTG-G 266
S GE P + + + Q S+++ ED + + + G G G SGV + G G
Sbjct: 166 SMSGESKHPEHKVKPDQIMQTMASELEEEDPDHTSKPMGYGVGRGYGSGGSGVGYGVGIG 225
Query: 265 TTGGVQRXXXXXXXXXXXXXXXLKHDLGHLLPVGLGVEGGFGEQHGVLLGGDTQL-IVEG 89
++GG + G G+G GG G G+ GG T + I EG
Sbjct: 226 SSGGSGFGEGIGSSGGNGFGEGIGSSGGSGFGEGIGSSGGSGFGEGIGSGGGTGIGIGEG 285
Query: 88 V 86
+
Sbjct: 286 I 286
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 27.1 bits (57), Expect = 7.1
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2
Query: 260 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 403
G+T +V SG G S + + E Y P A L L GRDL Y ++ L
Sbjct: 1186 GQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL 1232
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +2
Query: 56 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 205
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At5g35830.1 68418.m04305 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 282
Score = 26.6 bits (56), Expect = 9.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -2
Query: 481 DIAELLLDVTNDFPLSGGGERVTPL 407
+IA++L++ D P+ GG + TP+
Sbjct: 171 EIAKMLIEKNKDLPMIRGGGKTTPI 195
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 26.6 bits (56), Expect = 9.4
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 300 SPTPYPSTKVTLCPTPSS 353
SPTP PST PTPS+
Sbjct: 278 SPTPTPSTPTPSTPTPST 295
>At1g69670.1 68414.m08018 cullin, putative contains similarity to
Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from
[Homo sapiens]; contains Pfam profile PF00888: Cullin
family
Length = 732
Score = 26.6 bits (56), Expect = 9.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 317 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 439
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERNLIVKLKTECGYQFTSKLE 462
>At1g26830.1 68414.m03270 cullin, putative similar to Cullin homolog
3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens];
contains Pfam profile PF00888: Cullin family
Length = 732
Score = 26.6 bits (56), Expect = 9.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 317 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 439
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERSLIVKLKTECGYQFTSKLE 462
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,546,556
Number of Sequences: 28952
Number of extensions: 186019
Number of successful extensions: 778
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 888318720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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