Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31536
(370 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 146 6e-36
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 141 1e-34
07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 141 2e-34
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 141 2e-34
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 129 8e-31
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 118 2e-27
08_02_0383 - 16539472-16539633,16543044-16543205 35 0.017
08_02_1442 + 27120604-27120890,27121029-27121166,27121280-271213... 29 0.86
09_06_0204 - 21559024-21559287,21559445-21559567,21559665-215597... 29 1.5
03_05_0248 + 22348504-22348568,22349064-22349371,22349476-223500... 28 2.0
11_06_0289 - 21969248-21973516 28 2.6
11_06_0185 + 21018045-21022307 28 2.6
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 27 3.5
08_02_1393 - 26706198-26706592,26707055-26707301,26707407-267082... 27 4.6
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 27 6.1
11_01_0763 + 6402901-6403971,6404581-6404826 26 8.1
10_02_0105 - 5345149-5347833 26 8.1
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 26 8.1
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352... 26 8.1
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 146 bits (353), Expect = 6e-36
Identities = 69/118 (58%), Positives = 85/118 (72%), Gaps = 4/118 (3%)
Frame = +2
Query: 17 KQATVFLNRKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI 184
+Q F +K G +K R KN+GLGFKTPREAIEGTYIDKKCPFTG VSIRGRI
Sbjct: 3 EQVLDFSPKKSGKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRI 62
Query: 185 LTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGR 358
+ G KM RT+++RR+YLH++ KY R+EKRH N+ H+SPCFR V+ GD V IG+
Sbjct: 63 IAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQ 119
>04_04_0417 -
25052305-25052398,25052583-25052672,25052740-25052905,
25053547-25053647,25053735-25053775,25054170-25054181
Length = 167
Score = 141 bits (342), Expect = 1e-34
Identities = 74/130 (56%), Positives = 88/130 (67%), Gaps = 12/130 (9%)
Frame = +2
Query: 5 KAFQKQATVFLNRKGGMKRKDM-----RHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
+AF KQ VFL K K K R KN+GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 7 RAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNR-------FEKRHRNMSVHLSPCFRDV 328
IRGRI+ G KM RT+++RR+YLH++ KY R +EKRH N+ H+SPCFR V
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHISPCFR-V 125
Query: 329 EIGDIVTIGR 358
+ GD V IG+
Sbjct: 126 KEGDHVIIGQ 135
>07_03_0920 -
22603868-22603964,22604110-22604222,22604281-22604429,
22604732-22604832,22604917-22604957,22605584-22605595
Length = 170
Score = 141 bits (341), Expect = 2e-34
Identities = 74/132 (56%), Positives = 91/132 (68%), Gaps = 14/132 (10%)
Frame = +2
Query: 5 KAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
KAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 7 KAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYN---------RFEKRHRNMSVHLSPCFR 322
IRGRI+ G KM RT+++RR+YLH++ KY R+EKRH N+ H+SPCFR
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHVSPCFR 126
Query: 323 DVEIGDIVTIGR 358
V+ GD V IG+
Sbjct: 127 -VKEGDHVIIGQ 137
>04_04_1134 +
31137326-31137337,31137964-31138004,31138089-31138189,
31138489-31138637,31138696-31138808,31138954-31139050
Length = 170
Score = 141 bits (341), Expect = 2e-34
Identities = 74/132 (56%), Positives = 91/132 (68%), Gaps = 14/132 (10%)
Frame = +2
Query: 5 KAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
KAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 7 KAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYN---------RFEKRHRNMSVHLSPCFR 322
IRGRI+ G KM RT+++RR+YLH++ KY R+EKRH N+ H+SPCFR
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAHVSPCFR 126
Query: 323 DVEIGDIVTIGR 358
V+ GD V IG+
Sbjct: 127 -VKEGDHVIIGQ 137
>04_04_1135 +
31140032-31140043,31140552-31140592,31140680-31140780,
31141113-31141419,31141565-31141661
Length = 185
Score = 129 bits (311), Expect = 8e-31
Identities = 74/147 (50%), Positives = 91/147 (61%), Gaps = 29/147 (19%)
Frame = +2
Query: 5 KAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
KAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 7 KAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYN------------------------RFE 277
IRGRI+ G KM RT+++RR+YLH++ KY R+E
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISDLGCRYE 126
Query: 278 KRHRNMSVHLSPCFRDVEIGDIVTIGR 358
KRH N+ H+SPCFR V+ GD V IG+
Sbjct: 127 KRHSNIPAHVSPCFR-VKEGDHVIIGQ 152
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 118 bits (283), Expect = 2e-27
Identities = 57/94 (60%), Positives = 69/94 (73%), Gaps = 5/94 (5%)
Frame = +2
Query: 5 KAFQKQATVFLN-RKGGMKRKD----MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
KAF KQ VFL+ +K G +K R K++GLGFKTPREAIEGTYIDKKCPFTG VS
Sbjct: 7 KAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVS 66
Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNR 271
IRGRI+ G KM RT+++RR+YLH++ KY R
Sbjct: 67 IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
>08_02_0383 - 16539472-16539633,16543044-16543205
Length = 107
Score = 35.1 bits (77), Expect = 0.017
Identities = 20/56 (35%), Positives = 28/56 (50%)
Frame = +2
Query: 185 LTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 352
+ G+V KMQ++VV+ D L + YNR+ KR H D IGD V +
Sbjct: 4 VVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDET--EDCNIGDRVKL 57
>08_02_1442 +
27120604-27120890,27121029-27121166,27121280-27121382,
27121877-27122036,27122927-27123114,27123203-27124770,
27124882-27125869,27126595-27127098,27127347-27127433,
27127753-27127821,27128012-27128041
Length = 1373
Score = 29.5 bits (63), Expect = 0.86
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -1
Query: 139 VNVGTLNRLSGSFEA*TNILMVTHVLPLHATFPVQENGGLFLKR 8
++ G L ++SGSF+ T++ + LPL+ V E FL+R
Sbjct: 772 ISEGELKQISGSFKGTTSLRTLLMELPLYRGLEVLELRSFFLER 815
>09_06_0204 -
21559024-21559287,21559445-21559567,21559665-21559718,
21559800-21560721,21560803-21561212,21561284-21561408,
21561524-21561571,21561668-21561789,21562008-21562099,
21562242-21562429,21562582-21562696,21562780-21562863,
21562994-21563087,21563393-21563510,21563805-21563930,
21564002-21564074,21564209-21564296,21564674-21564744,
21564839-21564918,21565004-21565065,21565169-21565310,
21565410-21565510,21565600-21565644,21565725-21565789,
21566088-21566163,21566246-21566300,21566416-21566773
Length = 1366
Score = 28.7 bits (61), Expect = 1.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 257 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGR 358
P+Y +K R+ S+ + C+ +I D+V +GR
Sbjct: 197 PEYKNAQKLSRHPSLQIGGCYEVHDIEDLVRVGR 230
>03_05_0248 +
22348504-22348568,22349064-22349371,22349476-22350039,
22350082-22350128,22351244-22351715,22352349-22352611
Length = 572
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 119 IEGTYIDKKCPFTGNVSIRGRILTGVVQKM-KMQRTVVIRRDYLHYLPKY 265
+ GT PFTG++S G + + KM + +V +DYLH K+
Sbjct: 461 VRGTEDAPITPFTGDMSQSGDAIVAALMKMLAINPHLVTDKDYLHTAMKH 510
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 197 VQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 331
++KM + T + +H LPK+ E + LS CF +VE
Sbjct: 1251 LEKMVLSSTCIESISGVHGLPKFEELELNSSSCGRLLSSCFYNVE 1295
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 197 VQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 331
++KM + T + +H LPK+ E + LS CF +VE
Sbjct: 1249 LEKMVLSSTCIESISGVHGLPKFEELELNSSSCGRLLSSCFYNVE 1293
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 38 NRKGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGR 181
N G ++RH ++G E T +DK+ P +G S+ GR
Sbjct: 117 NLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGR 164
>08_02_1393 -
26706198-26706592,26707055-26707301,26707407-26708249,
26708420-26709091
Length = 718
Score = 27.1 bits (57), Expect = 4.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 108 PERRLRVPTLTRSVPSLVTF 167
PERR VP RS+ LVTF
Sbjct: 155 PERRRNVPVAQRSLEGLVTF 174
>04_04_1693 + 35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 26.6 bits (56), Expect = 6.1
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +2
Query: 185 LTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGR 358
LTG V K +TV + L PKY R E+ + H P ++GD+V + R
Sbjct: 972 LTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DP-DNQFKVGDVVELRR 1027
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 26.2 bits (55), Expect = 8.1
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1
Query: 313 RRQMHGHIPVPF 278
RR HGHIP+PF
Sbjct: 371 RRPSHGHIPLPF 382
>10_02_0105 - 5345149-5347833
Length = 894
Score = 26.2 bits (55), Expect = 8.1
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 227 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 331
VIR++ +YNR+ + + S P FR+ E
Sbjct: 113 VIRKEISEIFERYNRYNAVNSSTSTEAQPIFREDE 147
>04_04_1571 +
34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 22 GHRFPEQERWHEEEGHASP*ECWFRLQNSQRGD*GY 129
G + Q W E G +SP WF+L GD Y
Sbjct: 660 GWKCRNQVPWDPESGGSSPTAAWFKLFWQYIGDCSY 695
>03_01_0458 -
3521938-3522024,3522133-3522213,3522673-3522806,
3523189-3523270,3523420-3523692,3523953-3524162,
3524252-3524337,3525197-3525289,3526003-3526227,
3526320-3526930,3529328-3529395,3529491-3529679,
3529773-3529901,3530013-3532484
Length = 1579
Score = 26.2 bits (55), Expect = 8.1
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 83 SYGDACPSSSCHLSCSGKR 27
S GD PSSSC S SG R
Sbjct: 280 SPGDEAPSSSCQSSVSGHR 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,721,900
Number of Sequences: 37544
Number of extensions: 211101
Number of successful extensions: 503
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 496
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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