Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31536
         (370 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for ...   202   3e-52
BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.       202   3e-52
BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11 p...   202   3e-52
BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11 p...   202   3e-52
BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11 p...   202   3e-52
BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.       202   3e-52
BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11 p...   202   3e-52
BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11 p...   202   3e-52
AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11 p...   202   3e-52
AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11 p...   109   4e-24
AF070550-1|AAC28638.1|  342|Homo sapiens cote1 protein.                28   8.2  

>X06617-1|CAA29834.1|  158|Homo sapiens protein ( Human mRNA for
           ribosomal protein S11. ).
          Length = 158

 Score =  202 bits (493), Expect = 3e-52
 Identities = 93/122 (76%), Positives = 108/122 (88%), Gaps = 5/122 (4%)
 Frame = +2

Query: 5   KAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
           +A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVS
Sbjct: 8   RAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVS 67

Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
           IRGRIL+GVV KMKMQRT+VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT
Sbjct: 68  IRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVT 127

Query: 350 IG 355
           +G
Sbjct: 128 VG 129


>BC100025-1|AAI00026.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  202 bits (493), Expect = 3e-52
 Identities = 93/122 (76%), Positives = 108/122 (88%), Gaps = 5/122 (4%)
 Frame = +2

Query: 5   KAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
           +A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVS
Sbjct: 8   RAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVS 67

Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
           IRGRIL+GVV KMKMQRT+VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT
Sbjct: 68  IRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVT 127

Query: 350 IG 355
           +G
Sbjct: 128 VG 129


>BC070224-1|AAH70224.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  202 bits (493), Expect = 3e-52
 Identities = 93/122 (76%), Positives = 108/122 (88%), Gaps = 5/122 (4%)
 Frame = +2

Query: 5   KAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
           +A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVS
Sbjct: 8   RAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVS 67

Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
           IRGRIL+GVV KMKMQRT+VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT
Sbjct: 68  IRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVT 127

Query: 350 IG 355
           +G
Sbjct: 128 VG 129


>BC016378-1|AAH16378.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  202 bits (493), Expect = 3e-52
 Identities = 93/122 (76%), Positives = 108/122 (88%), Gaps = 5/122 (4%)
 Frame = +2

Query: 5   KAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
           +A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVS
Sbjct: 8   RAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVS 67

Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
           IRGRIL+GVV KMKMQRT+VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT
Sbjct: 68  IRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVT 127

Query: 350 IG 355
           +G
Sbjct: 128 VG 129


>BC010028-1|AAH10028.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  202 bits (493), Expect = 3e-52
 Identities = 93/122 (76%), Positives = 108/122 (88%), Gaps = 5/122 (4%)
 Frame = +2

Query: 5   KAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
           +A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVS
Sbjct: 8   RAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVS 67

Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
           IRGRIL+GVV KMKMQRT+VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT
Sbjct: 68  IRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVT 127

Query: 350 IG 355
           +G
Sbjct: 128 VG 129


>BC007945-1|AAH07945.1|  158|Homo sapiens RPS11 protein protein.
          Length = 158

 Score =  202 bits (493), Expect = 3e-52
 Identities = 93/122 (76%), Positives = 108/122 (88%), Gaps = 5/122 (4%)
 Frame = +2

Query: 5   KAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
           +A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVS
Sbjct: 8   RAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVS 67

Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
           IRGRIL+GVV KMKMQRT+VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT
Sbjct: 68  IRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVT 127

Query: 350 IG 355
           +G
Sbjct: 128 VG 129


>BC007603-1|AAH07603.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  202 bits (493), Expect = 3e-52
 Identities = 93/122 (76%), Positives = 108/122 (88%), Gaps = 5/122 (4%)
 Frame = +2

Query: 5   KAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
           +A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVS
Sbjct: 8   RAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVS 67

Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
           IRGRIL+GVV KMKMQRT+VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT
Sbjct: 68  IRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVT 127

Query: 350 IG 355
           +G
Sbjct: 128 VG 129


>BC007283-1|AAH07283.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  202 bits (493), Expect = 3e-52
 Identities = 93/122 (76%), Positives = 108/122 (88%), Gaps = 5/122 (4%)
 Frame = +2

Query: 5   KAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
           +A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVS
Sbjct: 8   RAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVS 67

Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
           IRGRIL+GVV KMKMQRT+VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT
Sbjct: 68  IRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVT 127

Query: 350 IG 355
           +G
Sbjct: 128 VG 129


>AB028893-2|BAA88215.1|  158|Homo sapiens ribosomal protein S11
           protein.
          Length = 158

 Score =  202 bits (493), Expect = 3e-52
 Identities = 93/122 (76%), Positives = 108/122 (88%), Gaps = 5/122 (4%)
 Frame = +2

Query: 5   KAFQKQATVFLNRKGGM-----KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVS 169
           +A+QKQ T+F N+K  +     K K  R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVS
Sbjct: 8   RAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVS 67

Query: 170 IRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 349
           IRGRIL+GVV KMKMQRT+VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT
Sbjct: 68  IRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVT 127

Query: 350 IG 355
           +G
Sbjct: 128 VG 129


>AB007152-1|BAA25818.1|   83|Homo sapiens ribosomal protein S11
           protein.
          Length = 83

 Score =  109 bits (261), Expect = 4e-24
 Identities = 47/54 (87%), Positives = 52/54 (96%)
 Frame = +2

Query: 194 VVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 355
           VV KMKMQRT+VIRRDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+G
Sbjct: 1   VVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVG 54


>AF070550-1|AAC28638.1|  342|Homo sapiens cote1 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 98  SLNQHSYGDACPSSSCHLSCSGKRWPV 18
           SL+  S GD   SSSC +SC    W V
Sbjct: 291 SLHLRSCGDLSSSSSCGVSCLAAGWSV 317


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,449,007
Number of Sequences: 237096
Number of extensions: 1128056
Number of successful extensions: 2283
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2274
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)