Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31536
(370 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical pr... 162 6e-41
Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical pr... 29 0.79
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 4.2
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 4.2
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 26 7.3
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 26 7.3
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 26 7.3
AL031628-1|CAA20973.1| 416|Caenorhabditis elegans Hypothetical ... 26 7.3
AC006632-8|AAK85473.1| 117|Caenorhabditis elegans Hypothetical ... 26 7.3
AC006621-2|AAK68262.2| 544|Caenorhabditis elegans Hypothetical ... 26 7.3
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 26 9.7
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 26 9.7
Z68270-11|CAJ90499.1| 394|Caenorhabditis elegans Hypothetical p... 26 9.7
Z68270-10|CAA92572.2| 459|Caenorhabditis elegans Hypothetical p... 26 9.7
U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like p... 26 9.7
AY305838-1|AAR11983.1| 459|Caenorhabditis elegans nuclear recep... 26 9.7
AF083227-1|AAD03685.1| 290|Caenorhabditis elegans nuclear recep... 26 9.7
AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like ... 26 9.7
>Z73426-1|CAA97792.1| 155|Caenorhabditis elegans Hypothetical
protein F40F11.1 protein.
Length = 155
Score = 162 bits (394), Expect = 6e-41
Identities = 75/120 (62%), Positives = 91/120 (75%), Gaps = 3/120 (2%)
Frame = +2
Query: 5 KAFQKQATVFLNRKGGM---KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIR 175
+AF KQ TV LN K + +K R+ + VGLGFK PR+A+EGTYIDKKCP+ GNV IR
Sbjct: 7 RAFLKQPTVNLNNKARILAGSKKTPRYIREVGLGFKAPRDAVEGTYIDKKCPWAGNVPIR 66
Query: 176 GRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 355
G ILTGVV K KM RT+V+RRDYLHY+ KY R+EKRH+N+ H SP FRD+ GD+VTIG
Sbjct: 67 GMILTGVVLKNKMTRTIVVRRDYLHYIKKYRRYEKRHKNVPAHCSPAFRDIHPGDLVTIG 126
>Z69883-3|CAA93741.2| 450|Caenorhabditis elegans Hypothetical
protein C27C12.4 protein.
Length = 450
Score = 29.5 bits (63), Expect = 0.79
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 199 SENEDAENCRDPPRLPSLPTQIQ*VRETAQEYVRAFVALL 318
S+NED E+ DP LP + + E +R+ +ALL
Sbjct: 199 SQNEDIESSEDPLILPETENDVTLPASSVSEQLRSTIALL 238
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 240 SRRITTVLCIFIF*TTPVRMRPRIETLP 157
++R+TT + TTPV++ P TLP
Sbjct: 341 TKRLTTTKATTVLTTTPVKVTPATTTLP 368
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 210 RCRELS*SAAITFTTYPNTIGSRNGTGICPCI 305
+C + + AA T TT I +NG +C C+
Sbjct: 564 KCVQANNEAATTSTTTSQCIKEKNGETVCKCL 595
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 210 RCRELS*SAAITFTTYPNTIGSRNGTGICPCI 305
+C + + AA T TT I +NG +C C+
Sbjct: 564 KCVQANNEAATTSTTTSQCIKEKNGETVCKCL 595
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 210 RCRELS*SAAITFTTYPNTIGSRNGTGICPCI 305
+C + + AA T TT I +NG +C C+
Sbjct: 564 KCVQANNEAATTSTTTSQCIKEKNGETVCKCL 595
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 92 NQHSYGDACPSSSCHLSCSGKRW 24
+QH Y + + CH SC+ K W
Sbjct: 207 HQHCYQNGKSMAKCHESCNDKCW 229
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 92 NQHSYGDACPSSSCHLSCSGKRW 24
+QH Y + + CH SC+ K W
Sbjct: 207 HQHCYQNGKSMAKCHESCNDKCW 229
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 92 NQHSYGDACPSSSCHLSCSGKRW 24
+QH Y + + CH SC+ K W
Sbjct: 258 HQHCYQNGKSMAKCHESCNDKCW 280
>AL031628-1|CAA20973.1| 416|Caenorhabditis elegans Hypothetical
protein Y102A5D.1 protein.
Length = 416
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 13 SETGHRFPEQERWHEEEGHA 72
+E GHR P+ +W++E HA
Sbjct: 390 TELGHRKPKGNQWNKEAPHA 409
>AC006632-8|AAK85473.1| 117|Caenorhabditis elegans Hypothetical
protein F28A10.7 protein.
Length = 117
Score = 26.2 bits (55), Expect = 7.3
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 308 TNARTYSCAVSRTYCIWVGSEG 243
TN+ C V YC W G+ G
Sbjct: 34 TNSMYLECCVKHRYCRWYGNTG 55
>AC006621-2|AAK68262.2| 544|Caenorhabditis elegans Hypothetical
protein C52A10.2 protein.
Length = 544
Score = 26.2 bits (55), Expect = 7.3
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 271 PIVFG*VVKVIAADHDSSLHLHFLNDAGEDAAADRNV 161
PIVFG AA+H S L F GE + DR V
Sbjct: 430 PIVFGKNRPFNAANHGSDLRYIFGEGTGEFSKEDRQV 466
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 25.8 bits (54), Expect = 9.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 59 SSCHLSCSGKRWPVSE 12
+SC++ CSG++W E
Sbjct: 1011 ASCYIDCSGRKWNYGE 1026
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 25.8 bits (54), Expect = 9.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 59 SSCHLSCSGKRWPVSE 12
+SC++ CSG++W E
Sbjct: 1011 ASCYIDCSGRKWNYGE 1026
>Z68270-11|CAJ90499.1| 394|Caenorhabditis elegans Hypothetical
protein ZC410.1b protein.
Length = 394
Score = 25.8 bits (54), Expect = 9.7
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 104 TPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKR 283
T + I T+ + +CPFT N +R + ++ V+ DY P++N F
Sbjct: 149 TGMDFILDTHANLQCPFTVN-DLRPHDYRNF--RGMLRHDFVMLFDYATRFPEFNSFTSH 205
Query: 284 HRNM 295
+NM
Sbjct: 206 EKNM 209
>Z68270-10|CAA92572.2| 459|Caenorhabditis elegans Hypothetical
protein ZC410.1a protein.
Length = 459
Score = 25.8 bits (54), Expect = 9.7
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 104 TPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKR 283
T + I T+ + +CPFT N +R + ++ V+ DY P++N F
Sbjct: 214 TGMDFILDTHANLQCPFTVN-DLRPHDYRNF--RGMLRHDFVMLFDYATRFPEFNSFTSH 270
Query: 284 HRNM 295
+NM
Sbjct: 271 EKNM 274
>U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like
protein protein 6 protein.
Length = 928
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 230 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 334
I+ L LP++ K N +HLSPC D++I
Sbjct: 487 IQMSGLSILPQHVTL-KNDGNNQIHLSPCSEDLDI 520
>AY305838-1|AAR11983.1| 459|Caenorhabditis elegans nuclear receptor
NHR-11 protein.
Length = 459
Score = 25.8 bits (54), Expect = 9.7
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 104 TPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKR 283
T + I T+ + +CPFT N +R + ++ V+ DY P++N F
Sbjct: 214 TGMDFILDTHANLQCPFTVN-DLRPHDYRNF--RGMLRHDFVMLFDYATRFPEFNSFTSH 270
Query: 284 HRNM 295
+NM
Sbjct: 271 EKNM 274
>AF083227-1|AAD03685.1| 290|Caenorhabditis elegans nuclear receptor
NHR-11 protein.
Length = 290
Score = 25.8 bits (54), Expect = 9.7
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +2
Query: 104 TPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTVVIRRDYLHYLPKYNRFEKR 283
T + I T+ + +CPFT N +R + ++ V+ DY P++N F
Sbjct: 166 TGMDFILDTHANLQCPFTVN-DLRPHDYRNF--RGMLRHDFVMLFDYATRFPEFNSFTSH 222
Query: 284 HRNM 295
+NM
Sbjct: 223 EKNM 226
>AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like
protein KLP-6 protein.
Length = 928
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 230 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 334
I+ L LP++ K N +HLSPC D++I
Sbjct: 487 IQMSGLSILPQHVTL-KNDGNNQIHLSPCSEDLDI 520
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,903,987
Number of Sequences: 27780
Number of extensions: 173943
Number of successful extensions: 505
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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