Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31535
         (608 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1151 - 9727051-9729510,9733966-9734022,9735299-9735676           29   3.8  
01_05_0072 + 17891199-17892279,17893751-17893884,17893966-178941...    28   5.0  
07_03_0872 - 22190468-22190575,22190652-22190910,22191005-221911...    27   8.8  

>06_01_1151 - 9727051-9729510,9733966-9734022,9735299-9735676
          Length = 964

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 340 MIITASFTALTF*SVSDFEGHTPVILRSDRDISN*IN 450
           +I+  +FT L    V DF G+T ++  + +++SN IN
Sbjct: 678 LILPGTFTKLYHMQVLDFIGNTDLVFSAGKEMSNLIN 714


>01_05_0072 +
           17891199-17892279,17893751-17893884,17893966-17894115,
           17894207-17894524
          Length = 560

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 606 ILTLKSMRHINISDTRTNIQHTTKRLSLHLTSHGYL 499
           I T   M+H+N++  RT++ ++   L L L  HG L
Sbjct: 383 IATQNMMKHVNLAAERTDVVNSEGPLDLVLEPHGPL 418


>07_03_0872 -
           22190468-22190575,22190652-22190910,22191005-22191108,
           22191245-22191423,22191565-22191670,22191797-22191940,
           22192024-22192179,22192274-22192378,22192483-22192545,
           22192993-22192995
          Length = 408

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 194 MEFSSILCFFYILCV 150
           M FSSI CFF +LCV
Sbjct: 193 MMFSSIACFFELLCV 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,568,872
Number of Sequences: 37544
Number of extensions: 219702
Number of successful extensions: 410
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)