Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31535
         (608 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071071-1|AAL48693.1|   68|Drosophila melanogaster RE14453p pro...    32   0.53 
AF145655-1|AAD38630.1|  667|Drosophila melanogaster BcDNA.GH0914...    32   0.70 
AE013599-297|AAF59298.1|  667|Drosophila melanogaster CG4445-PA ...    32   0.70 
BT030441-1|ABO52861.1|  759|Drosophila melanogaster RE42355p pro...    29   6.6  
AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,...    29   6.6  

>AY071071-1|AAL48693.1|   68|Drosophila melanogaster RE14453p
           protein.
          Length = 68

 Score = 32.3 bits (70), Expect = 0.53
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -3

Query: 189 IFIYFMLFLYFMCLKSYIK 133
           I+I+FM FLY +CL  Y+K
Sbjct: 8   IYIFFMFFLYILCLSLYVK 26


>AF145655-1|AAD38630.1|  667|Drosophila melanogaster BcDNA.GH09147
           protein.
          Length = 667

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = -2

Query: 223 FSQLMLIAILWNFHLFYAFFIFYVS*ILY*ILTINRIDQKSKH 95
           F QL  + +L+ F LF+AFF+F +S  LY + +I   D + +H
Sbjct: 5   FQQLKKLWLLYLFLLFFAFFMFAISINLY-VASIQGGDAEMRH 46


>AE013599-297|AAF59298.1|  667|Drosophila melanogaster CG4445-PA
           protein.
          Length = 667

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = -2

Query: 223 FSQLMLIAILWNFHLFYAFFIFYVS*ILY*ILTINRIDQKSKH 95
           F QL  + +L+ F LF+AFF+F +S  LY + +I   D + +H
Sbjct: 5   FQQLKKLWLLYLFLLFFAFFMFAISINLY-VASIQGGDAEMRH 46


>BT030441-1|ABO52861.1|  759|Drosophila melanogaster RE42355p
           protein.
          Length = 759

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 122 KSNRPKIKTQLNI*TEVKLRPATKLETIHLSNRPP 18
           + NRPKI  + N  +++K  P+ K E       PP
Sbjct: 181 QKNRPKISVRFNTVSQIKYTPSAKRERQAREEEPP 215


>AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,
            isoform C protein.
          Length = 2347

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -1

Query: 122  KSNRPKIKTQLNI*TEVKLRPATKLETIHLSNRPP 18
            + NRPKI  + N  +++K  P+ K E       PP
Sbjct: 1769 QKNRPKISVRFNTVSQIKYTPSAKRERQAREEEPP 1803


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,493,591
Number of Sequences: 53049
Number of extensions: 407324
Number of successful extensions: 743
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)