Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31533
         (684 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L46721-1|AAC41774.1|  164|Homo sapiens mucin protein.                  34   0.54 
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.              32   2.2  
AJ292079-1|CAC44892.1|   67|Homo sapiens MUC5AC protein protein.       32   2.2  
Z34281-1|CAA84035.1|   62|Homo sapiens mucin protein.                  30   6.7  
X15218-1|CAA33288.1|  728|Homo sapiens protein ( Human ski oncog...    30   8.8  
AY334557-1|AAP97864.1|  168|Homo sapiens ski oncoprotein protein.      30   8.8  
AL590822-8|CAI12482.1|  728|Homo sapiens v-ski sarcoma viral onc...    30   8.8  

>L46721-1|AAC41774.1|  164|Homo sapiens mucin protein.
          Length = 164

 Score = 33.9 bits (74), Expect = 0.54
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +2

Query: 536 PKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 679
           P  TT+ T   T  +   P  S T AP T    +  ++ TLAPT S T
Sbjct: 41  PVPTTSTTSAPTTSTTSAPTTSTTSAPTTSTPSAPTTSTTLAPTTSTT 88



 Score = 29.9 bits (64), Expect = 8.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 545 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 679
           TT+ T   T  +   P  S TLAP T  + +  ++ T  PT S T
Sbjct: 60  TTSTTSAPTTSTPSAPTTSTTLAPTTSTTSAPTTSTTSTPTSSTT 104


>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
          Length = 1349

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 533  LPKATTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 679
            +P +T + T   T  +   P  S T AP  + +    ++ TLAPT S T
Sbjct: 1090 IPASTPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTTSTT 1138



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +2

Query: 545 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 679
           T+T + P+T  ++  P  S T  P+T  + S  ++ T APT S T
Sbjct: 773 TSTTSTPQTS-TISSPTTSTTPTPQTSTTSSPTTSTTSAPTTSTT 816



 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 545 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 673
           TT+ T   T  +   P  S T  P+T  S +  S+ T APT S
Sbjct: 669 TTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTS 711



 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 545 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 673
           TT+ T   T  +   P  S T  P+T  S +  S+ T APT S
Sbjct: 804 TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTAS 846


>AJ292079-1|CAC44892.1|   67|Homo sapiens MUC5AC protein protein.
          Length = 67

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 545 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVSPT 679
           TT+ T   T  +   P  S T  P+T  S +  S+ T APT S T
Sbjct: 16  TTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTSTT 60


>Z34281-1|CAA84035.1|   62|Homo sapiens mucin protein.
          Length = 62

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 545 TTTCTRPRTRFSLKKPARSRTLAPKTKASRSRDSTNTLAPTVS 673
           TT+ T   T  +   P  S T  P+T  S +  S+ T APT S
Sbjct: 12  TTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTAS 54


>X15218-1|CAA33288.1|  728|Homo sapiens protein ( Human ski oncogene
           mRNA. ).
          Length = 728

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 536 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 646
           P+   TCT+PR R  ++  P    TLAP       +DS
Sbjct: 443 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 480


>AY334557-1|AAP97864.1|  168|Homo sapiens ski oncoprotein protein.
          Length = 168

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 536 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 646
           P+   TCT+PR R  ++  P    TLAP       +DS
Sbjct: 120 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 157


>AL590822-8|CAI12482.1|  728|Homo sapiens v-ski sarcoma viral
           oncogene homolog (avian) protein.
          Length = 728

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 536 PKATTTCTRPRTR-FSLKKPARSRTLAPKTKASRSRDS 646
           P+   TCT+PR R  ++  P    TLAP       +DS
Sbjct: 443 PEPLATCTQPRKRKLTVDTPGAPETLAPVAAPEEDKDS 480


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.315    0.137    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,784,733
Number of Sequences: 237096
Number of extensions: 1599883
Number of successful extensions: 7170
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7170
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)