Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31529
(765 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 44 2e-05
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 38 0.001
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 34 0.026
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 32 0.078
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 32 0.078
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.14
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.18
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 31 0.24
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 30 0.31
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 30 0.42
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 29 0.73
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 29 0.73
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 0.73
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 28 1.3
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 28 1.3
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 28 1.7
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 1.7
SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharo... 27 2.2
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 27 2.9
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.9
SPBC28E12.03 |rga4||GTPase activating protein Rga4|Schizosacchar... 27 3.9
SPBC725.07 |pex5||peroxisomal targeting signal receptor |Schizos... 27 3.9
SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces p... 27 3.9
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 26 5.1
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 5.1
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 26 6.8
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 6.8
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 25 9.0
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 25 9.0
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/94 (23%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Frame = -2
Query: 686 LENRAQQDEERMDQLTNQLKEARLLAEDAD---GKSDEVSRKLAFVEDELEVAEDRVKSG 516
L +++ E ++++L + K+ RL A++ D +++++SRK+ +E+ELE + ++
Sbjct: 46 LSRKSEAAESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRET 105
Query: 515 DAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 414
K+ + + + + ++SLE + Q++EE
Sbjct: 106 TEKMRQTDVKAEHFERRVQSLERERDDMEQKLEE 139
Score = 38.3 bits (85), Expect = 0.001
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Frame = -2
Query: 659 ERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEE-- 486
E+++ + EA AE A+ K EV +L+ E E E + ++ ++++ ELEEE
Sbjct: 6 EKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELEEETK 65
Query: 485 ---LKVVGNSLKSLEVSE-----EKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKK 330
LK ++ E + E + +E + E+ V+
Sbjct: 66 QLRLKADNEDIQKTEAEQLSRKVELLEEELETNDKLLRETTEKMRQTDVKAEHFERRVQS 125
Query: 329 LQKEVDRLEDELGINKDRYKSLADEMDSTFAEL 231
L++E D +E +L D+Y + E+D L
Sbjct: 126 LERERDDMEQKLEEMTDKYTKVKAELDEVHQAL 158
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 38.3 bits (85), Expect = 0.001
Identities = 24/94 (25%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Frame = -2
Query: 683 ENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVED---ELEVAEDRVKSGD 513
+ + ++ +ER++ LT + + A+D++GK VS++ A +E+ +L + E+ + +
Sbjct: 164 DKKIKELKERINDLTYDYETLKANADDSEGKQTLVSKREAALEEFQSKLLIRENEINKRE 223
Query: 512 AKISELEEELKV----VGNSLKSLEVSEEKANQR 423
K++ E++LK + N L +E E+ N+R
Sbjct: 224 LKMNGKEDDLKKREKDLENRLLKVEEHEKSLNER 257
Score = 35.1 bits (77), Expect = 0.011
Identities = 24/102 (23%), Positives = 48/102 (47%)
Frame = -2
Query: 719 SADENTGMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEV 540
+AD++ G ++ R EE +L + E +GK D++ ++ +E+ L
Sbjct: 187 NADDSEGKQTLVSKREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLK 246
Query: 539 AEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 414
E+ KS + + ++L E + N K E E+ A ++ +E
Sbjct: 247 VEEHEKSLNERATKLSEANENFNNRFKEFEEREKSAIKQNKE 288
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 33.9 bits (74), Expect = 0.026
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Frame = -2
Query: 680 NRAQQDEERMDQLTNQLKEARLLAEDADG----KSDEVSRKLAFVEDELEVAEDRVKSGD 513
+R+Q+D++ + +E RLL E A KS EVS L+ E+ ED + S D
Sbjct: 551 HRSQRDKQESTE-----RELRLLQEKAASLERNKSSEVSNLLSRYNTEVAHLEDALHSKD 605
Query: 512 AKISELEEELKVVGNSLKSLEVSEEK 435
+++ L ELK N + L +E+
Sbjct: 606 RELANLGVELKSTENRYRQLLQEKEE 631
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 32.3 bits (70), Expect = 0.078
Identities = 23/102 (22%), Positives = 49/102 (48%)
Frame = -2
Query: 731 EAQQSADENTGMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVED 552
EA++ ++ + E +E +++LT+++ + D + DE+ ++L +E+
Sbjct: 575 EAEREIEKFEKTIRENEESISLFKEEVEKLTDEITQLSERYNDKCHEFDELQKRLQTLEE 634
Query: 551 ELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQ 426
E A++ +K S L E+LK+ + SL E+ Q
Sbjct: 635 ENNKAKE---DSTSKTSNLLEQLKMTEAEVDSLRKENEENKQ 673
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 32.3 bits (70), Expect = 0.078
Identities = 21/94 (22%), Positives = 41/94 (43%)
Frame = -2
Query: 731 EAQQSADENTGMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVED 552
E Q A E + + +R + ER+ L NQ+ A E + + LA +
Sbjct: 878 EEQALAHEKDILVERANSRVEVVHERLSSLENQVTIADEKYEFLYAEKQSIEEDLANKQT 937
Query: 551 ELEVAEDRVKSGDAKISELEEELKVVGNSLKSLE 450
E+ D + + K+S ++++ + + + K LE
Sbjct: 938 EISYLSDLSSTLEKKLSSIKKDEQTISSKYKELE 971
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.5 bits (68), Expect = 0.14
Identities = 23/76 (30%), Positives = 36/76 (47%)
Frame = -2
Query: 662 EERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEEL 483
EER D L N+L + + D+D + L V DEL+ + S + SE+ ++
Sbjct: 1172 EERSD-LANRLSDMKKSLSDSDNVISVIRSDLVRVNDELDTLKKDKDSLSTQYSEVCQDR 1230
Query: 482 KVVGNSLKSLEVSEEK 435
+ +SLK E S K
Sbjct: 1231 DDLLDSLKGCEESFNK 1246
Score = 29.9 bits (64), Expect = 0.42
Identities = 36/161 (22%), Positives = 67/161 (41%), Gaps = 11/161 (6%)
Frame = -2
Query: 683 ENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAF----VEDELEVA---EDRV 525
EN QQ+ +D + +L + E + EV+ KL+ + L VA D++
Sbjct: 825 ENLTQQNMTLIDNV-QKLMHKHVNQESKVSELKEVNGKLSLDLKNLRSSLNVAISDNDQI 883
Query: 524 KSGDAKISE----LEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXX 357
+ A++S+ LE+E + + LKSLE ++ + EE K
Sbjct: 884 LTQLAELSKNYDSLEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKS 943
Query: 356 XXXEKTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAE 234
K + Q+E+ L++E S+ ++D T ++
Sbjct: 944 SDLGKKLTARQEEISNLKEENMSQSQAITSVKSKLDETLSK 984
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.1 bits (67), Expect = 0.18
Identities = 31/153 (20%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Frame = -2
Query: 686 LENRAQQDEERMDQLTNQLKEARLLAEDADGKSD--EVSRKLAFVEDELEVAEDRVKSGD 513
L++ ++ E+ + N+L+ + A DADGK++ + +++ + + E +V++
Sbjct: 1489 LKSEKERTEKELADSKNELEHLQSEAVDADGKTEISNLEKEIHELRSDKEGLVQQVQNLS 1548
Query: 512 AKISELEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVK 333
A+++ L E G SLE ++E A R + + + V
Sbjct: 1549 AELAALREHSPTQG----SLENADEIARLRSQ---LESTKQYYEKEKETEILAARSELVA 1601
Query: 332 KLQKEVDRLEDELGINKDRYKSLADEMDSTFAE 234
+ +K + LE++L R K L ++ +E
Sbjct: 1602 EKEKTKEELENQLNEKSQRIKELEEQAQKNSSE 1634
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/83 (20%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = -2
Query: 656 RMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDA----KISELEE 489
R++QLTN+L+ + ++ + + K +E L + +++ + S + K+++LE+
Sbjct: 671 RLEQLTNELESLKSISRNKEKKFEEAISSLQLEKSNIQLQLTSLTSERSLALEKLNDLEK 730
Query: 488 ELKVVGNSLKSLEVSEEKANQRV 420
L + S L+ S + +++
Sbjct: 731 SLVLSERSKDELDESYKSLQEQL 753
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 30.7 bits (66), Expect = 0.24
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = -2
Query: 764 YRANWVPGPPLEAQQSAD-ENTGMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKS 588
Y+A W+P E+ Q +D E+T + ++E++ Q +++N + E ++ +++ +
Sbjct: 388 YQATWIPDEDEESDQYSDVEDTEV--IIEDQDNQ------EISNHVAEEKIDSDEEETID 439
Query: 587 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELK 480
D S + +E EV + + K EL+EEL+
Sbjct: 440 DAKSEMFVDLSEEEEVRQ--YEEYRKKQKELQEELE 473
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 30.3 bits (65), Expect = 0.31
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Frame = -2
Query: 698 MCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKS 519
M + +E R + E LT L+E+ E D K +++ + ++DE + +
Sbjct: 459 MTREMEERVSEVERTF--LTKLLEESAQGIEYTDQKLEKMGGWMKKLQDENSEKTETIAQ 516
Query: 518 GDAKISELEEELK-VVGNSLKSLEVSEEKANQ 426
+ I EL EEL+ + S+K +++ NQ
Sbjct: 517 LEQIIEELHEELRSLEEESIKESSATQQNENQ 548
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 29.9 bits (64), Expect = 0.42
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Frame = -2
Query: 581 VSRKLAFVEDEL-------EVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQR 423
+ R+L VEDEL V + R + + +IS+L + L+ N+++ L++ EK+ ++
Sbjct: 519 LQRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLEKSKKK 578
Query: 422 VEE 414
E+
Sbjct: 579 NED 581
Score = 27.1 bits (57), Expect = 2.9
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = -2
Query: 662 EERMDQLTNQLKEARLLAEDADGK----SDEVSRKLAF---VEDELEVAED-RVKSGDAK 507
+E D +TNQ + A A + + E R A V +E++V D RV++ AK
Sbjct: 644 KEDADFITNQYQNASTFAAEQSKEVAKLQAECKRLQAINSKVMEEVKVYNDSRVEALLAK 703
Query: 506 ISELEEELKVV 474
+S LEE LK++
Sbjct: 704 VSSLEETLKIL 714
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 29.1 bits (62), Expect = 0.73
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -2
Query: 581 VSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 420
VSR + + E+ E +K +SELE EL+ S L++ EK +++
Sbjct: 728 VSRSVEDKKKEIGHYESLIKEKQPHLSELEMELRNFVKSRDELQIQVEKVEEKI 781
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 29.1 bits (62), Expect = 0.73
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = -2
Query: 536 EDRVKSGDAKISELEEELKVVGNSLKSLEV---SEEKANQR 423
E+R+K+ DA I EE+ K + ++++SLE+ EKAN++
Sbjct: 47 EERIKACDAGIQTSEEQKKELEHTMQSLEMIINVLEKANEK 87
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.1 bits (62), Expect = 0.73
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 641 TNQLKEARLLAEDADG---KSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVG 471
+N L E L E+ +G K D ++++ + +ELE R+KS + +SEL +
Sbjct: 516 SNDLNEIHDLREENEGLTLKIDSITKEKDRLINELE---QRIKSYEVNVSELNGTIDEYR 572
Query: 470 NSLKSLE 450
N LK E
Sbjct: 573 NKLKDKE 579
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 28.3 bits (60), Expect = 1.3
Identities = 17/80 (21%), Positives = 35/80 (43%)
Frame = -2
Query: 725 QQSADENTGMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDEL 546
++S++E + E+ ++ E ++ K+A +ED++ S+ + +E
Sbjct: 40 EESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEED 99
Query: 545 EVAEDRVKSGDAKISELEEE 486
D +S SE EEE
Sbjct: 100 SEVSDESESESESESESEEE 119
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 235 SWLVTKLSHSTYRPHTYTNRTCTHTYAAPLPHTHKHMYINYTTTRIHVY 89
SW+ K S+ ++ RTCT + AP+ + YI R+HVY
Sbjct: 674 SWIGQKYSNVSFEKIDVAERTCTISLNAPILPDDGYAYI-----RLHVY 717
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 27.9 bits (59), Expect = 1.7
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = -2
Query: 737 PLEAQQSADENTGMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFV 558
PL+ Q D + +++ R + +ER+D LTN L E LL E K DE ++
Sbjct: 203 PLDFQ---DLRVALLSLVDERNEM-QERLDILTNLLDELTLLYE--TDKFDETMKEAILS 256
Query: 557 EDELEVAEDRVK 522
++L+ E R K
Sbjct: 257 FEDLKEQEIRRK 268
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/62 (20%), Positives = 31/62 (50%)
Frame = -2
Query: 599 DGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 420
+ + + V R L E++L++ + + ++ + E+ N L+SLE + + R+
Sbjct: 844 ESELNSVKRSLLKYENKLQIIKSSSSGLEEQMQRINSEISDKRNELESLEELQHEVATRI 903
Query: 419 EE 414
E+
Sbjct: 904 EQ 905
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/84 (21%), Positives = 35/84 (41%)
Frame = -2
Query: 500 ELEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXXXXEKTVKKLQK 321
E+E ELK + K +E+S E R+ + + + KL+
Sbjct: 422 EMENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKRKSLWREEAKLKS 481
Query: 320 EVDRLEDELGINKDRYKSLADEMD 249
++ ++D+L ++ K+L MD
Sbjct: 482 SIENVKDDLSRSE---KALGTTMD 502
>SPAC18G6.06 |||U3 snoRNP-associated protein
Utp11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 27.5 bits (58), Expect = 2.2
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = -2
Query: 737 PLEAQQSADENTGMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEV------S 576
P E Q+ D+ G ENR ++D+ ++LTNQ +L ++ + + E+
Sbjct: 151 PAEFFQTTDDLVGRT---ENRVKKDQIENNELTNQPFSGKLHSKLKEKAATELLLRQKRD 207
Query: 575 RKLAFVEDELEVAEDRVKSG 516
+KLA E+ +E+ DR+ G
Sbjct: 208 KKLAAAEERVEL--DRLLQG 225
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 27.1 bits (57), Expect = 2.9
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 557 EDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 420
E E E A K D+K S++EEE + ++ E+ EEK N+ +
Sbjct: 15 ETESESANGDTKQDDSKKSQVEEE----EDGIEESELGEEKDNKTI 56
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 679 TGPSRTRSVWTSSPTN*KRPVFSPRTLTENP-TRFRENWPSLKTNSKSPKTVSS 521
+G RT+S+ SP ++P T + P T +E+W + S ++ ++
Sbjct: 406 SGSERTKSLSKESPVEPEKPALPDATSSSTPTTENKESWTNQGIKSSQQRSANA 459
>SPBC28E12.03 |rga4||GTPase activating protein
Rga4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 933
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 709 RTPVCAKCWRTGPSRTRSVW 650
RT C KCW + PS T VW
Sbjct: 20 RTCFCIKCWESVPS-TSQVW 38
>SPBC725.07 |pex5||peroxisomal targeting signal receptor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 26.6 bits (56), Expect = 3.9
Identities = 18/79 (22%), Positives = 37/79 (46%)
Frame = -2
Query: 647 QLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGN 468
+L + +EA ++ + + D K +E+ E + ++K+ + + LEE K +
Sbjct: 166 ELAKKFEEASQISNKLEKEKDATGSKS--IEELWEEHQKQLKNAGLEPASLEEYQKQWED 223
Query: 467 SLKSLEVSEEKANQRVEEF 411
LKS +S++ V F
Sbjct: 224 FLKSNNISDDPYTSSVNSF 242
>SPCC965.03 |vma8||V-type ATPase subunit D |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 285
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -3
Query: 595 ENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQSLKKN*RSSVTPLNLSK 449
EN R ++KT K +T SL+ +S++LKK R V + +K
Sbjct: 7 ENVFPTRMTLTTMKTRLKGAQTGHSLLKRKSEALKKRFREIVVNIEQAK 55
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -3
Query: 670 SRTRSVWTSSPTN*KRPVFSPRTLTENPTRFRENWPSLKTNSKSP 536
S +++ ++SP++ K+ +F P ++ F NW S + SP
Sbjct: 63 SNSQTDLSNSPSSKKKNIFYPIARAKHSFYFNHNWSSDLQQANSP 107
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 26.2 bits (55), Expect = 5.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 625 RPVFSPRTLTENPTRFRENWPSLKTNSKSPK 533
RP+F R L E P R + S+ +SPK
Sbjct: 32 RPIFEKRLLAETPFSIRPSNASVLIAKRSPK 62
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 25.8 bits (54), Expect = 6.8
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = -2
Query: 599 DGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRV 420
+ K + +S K A E E ++ K K EEE V + E E+K N V
Sbjct: 7 NNKDESISTKNALEEKSNETKDETSKR---KHDPAEEE-SAVSTKVSKSEPLEDKGNAEV 62
Query: 419 EEF 411
+EF
Sbjct: 63 KEF 65
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 6.8
Identities = 13/58 (22%), Positives = 32/58 (55%)
Frame = -2
Query: 587 DEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEE 414
D+ + + F E + E A + + ++ +LEE+++ L++++ S + QR+E+
Sbjct: 585 DQQTTEAPFEEPD-EPAHEPTEEEQEEMRKLEEKIESTKYGLETIQTSGKTIKQRIEQ 641
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 9.0
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = -2
Query: 647 QLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGN 468
Q+T L++ + L + + + D + + + ++ L AED KS + S+ +E+LK
Sbjct: 307 QMTETLEKYKSLDFNMEKEGDVIQQLKSSIKKPLSGAEDEQKS-RSMFSKNDEKLK---- 361
Query: 467 SLKSLEVSEE 438
KSLE+ E+
Sbjct: 362 --KSLELMED 369
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 25.4 bits (53), Expect = 9.0
Identities = 22/81 (27%), Positives = 34/81 (41%)
Frame = -3
Query: 745 RGPPSRPSSRLTRTPVCAKCWRTGPSRTRSVWTSSPTN*KRPVFSPRTLTENPTRFRENW 566
R +RP SR+ T + S ++ V ++ T RPV + +T+ FREN
Sbjct: 242 RTSTTRPLSRVNVTNASGSISKNSTSPSK-VKVNASTKIVRPVSAAQTVRPGSRIFRENS 300
Query: 565 PSLKTNSKSPKTVSSLVTLRS 503
S T +S V + S
Sbjct: 301 ASNTQRPNVSATSNSTVRVAS 321
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,455,057
Number of Sequences: 5004
Number of extensions: 42896
Number of successful extensions: 246
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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