Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31524
(473 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 324 3e-89
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 319 6e-88
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 316 5e-87
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 316 5e-87
SB_56| Best HMM Match : Actin (HMM E-Value=0) 315 1e-86
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 8e-36
SB_54| Best HMM Match : Actin (HMM E-Value=0) 101 2e-22
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 84 7e-17
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 71 4e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 56 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 1e-08
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 56 2e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 6e-07
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 2e-06
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 0.85
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 1.1
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 1.5
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 29 1.5
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 3.4
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37) 28 3.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 4.5
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 4.5
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 4.5
SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 27 6.0
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 6.0
SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 7.9
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 27 7.9
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 27 7.9
SB_28771| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05) 27 7.9
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 324 bits (795), Expect = 3e-89
Identities = 149/150 (99%), Positives = 150/150 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 381
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 382 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
TQIMFETFNSPAMYVAIQAVLSLYASGRTT
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 150
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 319 bits (784), Expect = 6e-88
Identities = 146/150 (97%), Positives = 149/150 (99%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 381
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 382 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
TQIMFETFNSPAMYVAIQAVLSLYASGRTT
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 150
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 316 bits (777), Expect = 5e-87
Identities = 146/150 (97%), Positives = 149/150 (99%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 381
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 382 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
TQIMFETFNSPAMYVAIQAVLSLYASGRTT
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 150
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 316 bits (777), Expect = 5e-87
Identities = 146/148 (98%), Positives = 148/148 (100%)
Frame = +1
Query: 28 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 207
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 208 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 387
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 388 IMFETFNSPAMYVAIQAVLSLYASGRTT 471
IMFETFNSPAMYVAIQAVLSLYASGRTT
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTT 149
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 315 bits (773), Expect = 1e-86
Identities = 145/148 (97%), Positives = 148/148 (100%)
Frame = +1
Query: 28 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 207
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 208 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 387
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 388 IMFETFNSPAMYVAIQAVLSLYASGRTT 471
IMFETFNSPAMYVAIQAVLSLYASGRTT
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTT 149
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 186 bits (452), Expect = 1e-47
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +1
Query: 28 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 207
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 208 RGILTLKYPIEHGIITNWDDMEKIWHHTF 294
RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +1
Query: 367 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTT
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTT 112
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 146 bits (354), Expect = 8e-36
Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 3/147 (2%)
Frame = +1
Query: 40 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 213
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 214 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 390
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 391 MFETFNSPAMYVAIQAVLSLYASGRTT 471
MFE + +Y+AIQAVL+LYA G T
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLT 153
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 101 bits (243), Expect = 2e-22
Identities = 46/66 (69%), Positives = 56/66 (84%)
Frame = +1
Query: 274 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 453
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 454 ASGRTT 471
ASGRTT
Sbjct: 2189 ASGRTT 2194
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 46 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 147
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 83.8 bits (198), Expect = 7e-17
Identities = 35/50 (70%), Positives = 45/50 (90%)
Frame = +1
Query: 322 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTT
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTT 175
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 71.3 bits (167), Expect = 4e-13
Identities = 30/79 (37%), Positives = 52/79 (65%)
Frame = +1
Query: 232 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 411
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 412 PAMYVAIQAVLSLYASGRT 468
PA ++ +VL+ +A+GR+
Sbjct: 63 PAFFLCKNSVLTAFANGRS 81
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1
Query: 46 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 147
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.0 bits (129), Expect = 1e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +1
Query: 16 FKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 186
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 187 GDEAQSKRGILTL 225
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 1e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 160 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 339
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 388 IMFETFNSPAMYVAIQAVLSLYASGRTT 471
IMFE FNSPA+YVAIQAVLSLYASGRTT
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTT 28
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 6e-07
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -3
Query: 144 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 28
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.8 bits (111), Expect = 2e-06
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +1
Query: 37 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 216
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 217 LTLKY--PIEHGIITNWDDMEKIWHHTFYNE 303
L Y P + G + NWD ++IW +TF E
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.16
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 53 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 199
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 121
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.49
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 223 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 375
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 121
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -3
Query: 384 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 205
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 204 AL 199
++
Sbjct: 214 SV 215
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 8 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 121
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 401 PSTPPPCTSPFRPCSRCTPPVVPP 472
P+ P T P RP +PP VPP
Sbjct: 742 PAVSSPQTQPARPADTVSPPTVPP 765
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 2 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 127
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 2 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 127
K T ++ ATT + +T PA P P TT P ++ P+
Sbjct: 133 KPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 174
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 121
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_45593| Best HMM Match : ArfGap (HMM E-Value=3.3e-37)
Length = 732
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = -3
Query: 468 GTTGGVQREHGLNGDVHGGGVEGLKHDLGHLLPVGLGVEGGFGEQHG 328
GT GG Q G +G + GGG+ G G P GFG G
Sbjct: 629 GTPGGQQS--GFHGGIGGGGMGGGFSGQGGGFPTSQAQADGFGTSQG 673
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 149 PWWRGRPTMDGKTARGASSPAKPALHMPEP 60
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 17 SRCATTMLLR-L*STMAPACARPVSPAT 97
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 17 SRCATTMLLR-L*STMAPACARPVSPAT 97
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 17 SRCATTMLLR-L*STMAPACARPVSPAT 97
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
>SB_38992| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 27.5 bits (58), Expect = 6.0
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = -3
Query: 471 GGTT---GGVQREHGLNGDVHGGGVEGLKHDLGHLLPVGLGVE-GGFGEQHG 328
GGT GG +R+HG G HGG G H G G + GG G HG
Sbjct: 21 GGTRRDHGGTRRDHGGTGRDHGG--TGRDHGGTGRDHGGTGRDHGGTGRDHG 70
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 428 PFRPCSRCTPPVVPP 472
P PCS CT P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +1
Query: 19 KMCDDDVAALVVDNG-SGMCKAGFAGD 96
++CD D + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 143 WRGRPTMDGKTARGASSPAKPALHMPEP 60
W + G T R PAKPAL++P P
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSP 99
>SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +2
Query: 401 PSTPPPCTSPFR--PCSRCTPPVVPP 472
PSTP P +P PC+ PP PP
Sbjct: 358 PSTPAPTPAPLSSTPCAPFAPPPPPP 383
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 119 GKTARGASSPAKPALHMPEP 60
G T R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 40 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 144
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 17 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 121
S C T+++R T+ APA P SPAT P R
Sbjct: 51 SSCLATLVVRPLETIPAPAPTTPTSPATPASGPPIR 86
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 17 SRCATTMLLR-L*STMAPACARPVSPAT 97
S C T L+R L +T APA P SPAT
Sbjct: 523 SSCLATFLVRTLETTPAPAPTTPTSPAT 550
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +2
Query: 398 RPSTPPPCTS-PFRPCSRCTPPVVPP 472
+P TPPP T+ P P PPV P
Sbjct: 29 KPDTPPPGTNIPTPPSPNTPPPVTQP 54
>SB_28771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 468 GTTGGVQREHGLNGDVHGGG 409
G GGV E G +GDV GGG
Sbjct: 48 GGDGGVDCERGGDGDVDGGG 67
>SB_27641| Best HMM Match : Ank (HMM E-Value=8.6e-05)
Length = 397
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +2
Query: 395 LRPSTP--PPCTSPFRPCSRCTPPVVPP 472
++PS P PP P R SR PP +PP
Sbjct: 249 VKPSVPIPPPTKPPPRVASRRPPPPLPP 276
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,557,089
Number of Sequences: 59808
Number of extensions: 346520
Number of successful extensions: 1636
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 994359969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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