Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31524
(473 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 322 6e-89
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 321 2e-88
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 321 2e-88
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 321 2e-88
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 321 2e-88
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 321 2e-88
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 321 2e-88
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 321 2e-88
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 308 2e-84
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 282 1e-76
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 227 2e-60
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 188 1e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 188 2e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 5e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 5e-48
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 182 9e-47
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 148 2e-36
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 126 1e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 91 3e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 50 1e-06
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.32
AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical... 31 0.56
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 30 0.98
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 0.98
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 1.3
Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical pr... 28 3.0
U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor... 28 3.0
U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein. 28 3.0
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.9
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 3.9
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 5.2
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 5.2
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 5.2
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 5.2
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 5.2
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 27 5.2
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 27 6.9
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 27 6.9
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 27 6.9
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 27 9.1
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 27 9.1
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.1
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 322 bits (792), Expect = 6e-89
Identities = 148/150 (98%), Positives = 150/150 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 381
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 382 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
TQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 321 bits (788), Expect = 2e-88
Identities = 147/150 (98%), Positives = 150/150 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 381
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 382 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
TQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 321 bits (788), Expect = 2e-88
Identities = 147/150 (98%), Positives = 150/150 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 381
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 382 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
TQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 321 bits (788), Expect = 2e-88
Identities = 147/150 (98%), Positives = 150/150 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 381
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 382 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
TQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 321 bits (788), Expect = 2e-88
Identities = 147/150 (98%), Positives = 150/150 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 381
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 382 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
TQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 321 bits (788), Expect = 2e-88
Identities = 146/150 (97%), Positives = 150/150 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 381
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 382 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
TQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 321 bits (788), Expect = 2e-88
Identities = 147/150 (98%), Positives = 150/150 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 381
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 382 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
TQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 321 bits (788), Expect = 2e-88
Identities = 147/150 (98%), Positives = 150/150 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 381
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 382 TQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
TQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTT 150
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 308 bits (755), Expect = 2e-84
Identities = 139/148 (93%), Positives = 147/148 (99%)
Frame = +1
Query: 28 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 207
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 208 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 387
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 388 IMFETFNSPAMYVAIQAVLSLYASGRTT 471
IMFETFN+PAMYV IQAVLSLYASGRTT
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTT 149
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 282 bits (691), Expect = 1e-76
Identities = 129/132 (97%), Positives = 132/132 (100%)
Frame = +1
Query: 76 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 255
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 256 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 435
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 436 AVLSLYASGRTT 471
AVLSLYASGRTT
Sbjct: 125 AVLSLYASGRTT 136
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 227 bits (556), Expect = 2e-60
Identities = 104/106 (98%), Positives = 106/106 (100%)
Frame = +1
Query: 154 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 333
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 334 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTT
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT 106
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 188 bits (459), Expect = 1e-48
Identities = 85/152 (55%), Positives = 115/152 (75%), Gaps = 4/152 (2%)
Frame = +1
Query: 28 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 198
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 199 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 375
+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 376 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTT 471
+ +I FETFN PA+Y+ +QAVLSLYA+GRTT
Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSLYATGRTT 153
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 188 bits (458), Expect = 2e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKI 279
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 5e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKI 279
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 5e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDMEKI 279
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 182 bits (444), Expect = 9e-47
Identities = 82/83 (98%), Positives = 83/83 (100%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 201
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 202 SKRGILTLKYPIEHGIITNWDDM 270
SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 148 bits (359), Expect = 2e-36
Identities = 73/145 (50%), Positives = 99/145 (68%), Gaps = 3/145 (2%)
Frame = +1
Query: 46 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 219
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 220 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 396
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 397 ETFNSPAMYVAIQAVLSLYASGRTT 471
E + ++YVA+QAVL+LYA G T
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLT 153
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 126 bits (303), Expect = 1e-29
Identities = 68/159 (42%), Positives = 90/159 (56%), Gaps = 13/159 (8%)
Frame = +1
Query: 22 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 165
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 166 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 342
D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 343 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYAS 459
E PLN NRE +IMFE+FN P +Y+A+QAVL+L AS
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 91.5 bits (217), Expect = 3e-19
Identities = 59/163 (36%), Positives = 85/163 (52%), Gaps = 17/163 (10%)
Frame = +1
Query: 31 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 204
D+V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 205 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 339
KR G + P ++ G+I +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 340 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT 468
+E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRT 171
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 49.6 bits (113), Expect = 1e-06
Identities = 33/123 (26%), Positives = 58/123 (47%)
Frame = +1
Query: 37 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 216
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 217 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 396
++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 397 ETF 405
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 49.6 bits (113), Expect = 1e-06
Identities = 33/123 (26%), Positives = 58/123 (47%)
Frame = +1
Query: 37 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 216
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 217 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 396
++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 397 ETF 405
+ F
Sbjct: 116 DYF 118
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.32
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 53 STMAPACARPVSPATTRPAPSSRP 124
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AL132898-19|CAN99707.1| 258|Caenorhabditis elegans Hypothetical
protein Y59A8B.26 protein.
Length = 258
Score = 30.7 bits (66), Expect = 0.56
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -3
Query: 471 GGTTGGVQREHGLNGDVHG---GGVEGLKHDLGHLLPVGLGVEGGFGEQHGVLLGGDT 307
GG TGG+ G+ G G G + GL +G L G GG G G+ LGG T
Sbjct: 129 GGATGGLGGLSGILGGATGGATGALGGLTGTVGGLTNALEGATGGLGGLSGI-LGGAT 185
Score = 27.1 bits (57), Expect = 6.9
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 468 GTTGGVQREHGLNGDVHGGG---VEGLKHDLGHLLPVGLGVEGGFGEQHGVLLG 316
G TGG+ G+ G GG + GL +G L G GG G G+L G
Sbjct: 169 GATGGLGGLSGILGGATGGATGALGGLTGTVGGLTNALGGATGGLGGLSGILGG 222
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 29.9 bits (64), Expect = 0.98
Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 2/144 (1%)
Frame = +1
Query: 46 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 219
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 220 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 399
+E I D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 400 TFNSPAMYVAIQAVLSLYASGRTT 471
+ + Q L LYA TT
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTT 322
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 0.98
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +2
Query: 44 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 151
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 167 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 57
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>Z68113-2|CAA92149.2| 327|Caenorhabditis elegans Hypothetical
protein E03G2.3 protein.
Length = 327
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 456 GVQREHGLNGDVHGGGVEGLKHDLGHLLPVGL-GVEGGFG 340
G + E G++G G+ G+K D+G L P G+ G +G G
Sbjct: 76 GDRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMG 115
>U33919-1|AAA96505.1| 327|Caenorhabditis elegans MEC-5 precursor
protein.
Length = 327
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 456 GVQREHGLNGDVHGGGVEGLKHDLGHLLPVGL-GVEGGFG 340
G + E G++G G+ G+K D+G L P G+ G +G G
Sbjct: 76 GDRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMG 115
>U33918-1|AAA96504.1| 327|Caenorhabditis elegans MEC-5 protein.
Length = 327
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 456 GVQREHGLNGDVHGGGVEGLKHDLGHLLPVGL-GVEGGFG 340
G + E G++G G+ G+K D+G L P G+ G +G G
Sbjct: 76 GDRSEDGMSGRDGMQGIPGVKGDMGPLGPTGMKGDKGSMG 115
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 76 KAGFAGDDAPRAVFPSIVGRPRHQG 150
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 3.9
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 53 STMAPACARPVSPATTRPAPSSRPSWVALATRA 151
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 217 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 134
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 217 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 134
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 217 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 134
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 217 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 134
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 217 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 134
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.5 bits (58), Expect = 5.2
Identities = 20/46 (43%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -3
Query: 471 GGTTGGVQREHGLNGDVHGGGVEGL--KHDLGHLLPVGLGVEGGFG 340
GG GG G G V GGG G H GH VG G GG G
Sbjct: 81 GGGHGGAAVGGGYGGAVGGGGGGGYGGGHGGGHGGAVGGGYGGGGG 126
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 321 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 154
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 321 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 154
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -3
Query: 321 LGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSLALGLV--THVGVFLAHTDH 154
L G Q +V +VP +H+ +D++ L S+A+G V +H GV + H H
Sbjct: 215 LHGRDQSVVSSIVPASVHIQSDSEDSIAPSKLTH---SIAVGGVVDSHNGVNVLHRSH 269
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical
protein K01A6.4 protein.
Length = 284
Score = 27.1 bits (57), Expect = 6.9
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = -3
Query: 471 GGTTGGVQREHGLNGDVHGGGVEGLKHDLGHLLPVGLGVEGGFGEQHGVLLG 316
GG GG + G G GG G G G +GGFG Q G G
Sbjct: 54 GGMQGGFGGQSGFGGGSSQGGFGGFGQQGGF----GGNSQGGFGGQQGGFSG 101
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 471 GGTTGGVQREHGLNGDVHGGG 409
GG GG HG G HGGG
Sbjct: 190 GGGGGGGHHHHGGGGHYHGGG 210
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 401 PSTPPPCTSPFRPCSRCTPPVVPP 472
P PP C P PC PP+ PP
Sbjct: 32 PPPPPMCAPPPLPCP--PPPICPP 53
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +1
Query: 256 NWDDMEKIWHHTFYNE--LRVAPEEHPV 333
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = +2
Query: 407 TPPPCTSPFRP---CSRCTPPVVPP 472
TP P +PFRP R PP PP
Sbjct: 224 TPAPTLAPFRPRPTTRRLPPPTTPP 248
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = +2
Query: 407 TPPPCTSPFRP---CSRCTPPVVPP 472
TP P +PFRP R PP PP
Sbjct: 222 TPAPTLAPFRPRPTTRRLPPPTTPP 246
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 229 YPIEHGIITN-WDDMEKIWHHTFYNELRVAPEEHP 330
+P E+ I+++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 26.6 bits (56), Expect = 9.1
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 229 YPIEHGIITN-WDDMEKIWHHTFYNELRVAPEEHP 330
+P E+ I+++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,920,478
Number of Sequences: 27780
Number of extensions: 245852
Number of successful extensions: 1372
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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