Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31521
         (793 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P81900 Cluster: cAMP-dependent protein kinase type II r...    60   8e-08
UniRef50_Q7PPI8 Cluster: ENSANGP00000022232; n=3; Endopterygota|...    57   6e-07
UniRef50_P31323 Cluster: cAMP-dependent protein kinase type II-b...    44   0.003
UniRef50_Q4RSC3 Cluster: Chromosome 13 SCAF15000, whole genome s...    43   0.008
UniRef50_Q5DI18 Cluster: SJCHGC02266 protein; n=1; Schistosoma j...    40   0.095
UniRef50_A7KCS7 Cluster: NADH dehydrogenase subunit 1; n=4; Dika...    38   0.29 
UniRef50_A0CKN5 Cluster: Chromosome undetermined scaffold_2, who...    36   1.5  
UniRef50_A7S513 Cluster: Predicted protein; n=1; Nematostella ve...    33   8.2  

>UniRef50_P81900 Cluster: cAMP-dependent protein kinase type II
           regulatory subunit; n=17; Eumetazoa|Rep: cAMP-dependent
           protein kinase type II regulatory subunit - Drosophila
           melanogaster (Fruit fly)
          Length = 377

 Score = 59.7 bits (138), Expect = 8e-08
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = +1

Query: 1   PCMEIMKRNIDDYEEQLVKLFGDKSNLTDVR 93
           PCM+IMKRNIDDYE QLVK+FG K+N+TD R
Sbjct: 347 PCMDIMKRNIDDYESQLVKIFGSKNNITDTR 377


>UniRef50_Q7PPI8 Cluster: ENSANGP00000022232; n=3;
           Endopterygota|Rep: ENSANGP00000022232 - Anopheles
           gambiae str. PEST
          Length = 381

 Score = 56.8 bits (131), Expect = 6e-07
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +1

Query: 1   PCMEIMKRNIDDYEEQLVKLFGDKSNLTDVR 93
           PCM IMKRNI DYE QLVK+FG K+N+TD+R
Sbjct: 351 PCMNIMKRNIGDYETQLVKIFGSKNNITDIR 381


>UniRef50_P31323 Cluster: cAMP-dependent protein kinase type II-beta
           regulatory subunit; n=56; Deuterostomia|Rep:
           cAMP-dependent protein kinase type II-beta regulatory
           subunit - Homo sapiens (Human)
          Length = 418

 Score = 44.4 bits (100), Expect = 0.003
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = +1

Query: 1   PCMEIMKRNIDDYEEQLVKLFGDKSNLTD 87
           PCMEIMKRNI  YEEQLV LFG   ++ +
Sbjct: 387 PCMEIMKRNIATYEEQLVALFGTNMDIVE 415


>UniRef50_Q4RSC3 Cluster: Chromosome 13 SCAF15000, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 13
           SCAF15000, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 422

 Score = 43.2 bits (97), Expect = 0.008
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +1

Query: 1   PCMEIMKRNIDDYEEQLVKLFGDKS 75
           PCM+IMKRNI +YEEQLV LFG  +
Sbjct: 398 PCMDIMKRNIANYEEQLVTLFGSST 422


>UniRef50_Q5DI18 Cluster: SJCHGC02266 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC02266 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 377

 Score = 39.5 bits (88), Expect = 0.095
 Identities = 14/31 (45%), Positives = 23/31 (74%)
 Frame = +1

Query: 1   PCMEIMKRNIDDYEEQLVKLFGDKSNLTDVR 93
           PC++I++RNIDDYE +L  +FG    + ++R
Sbjct: 346 PCLDILRRNIDDYEAKLKDIFGSLDKVPELR 376


>UniRef50_A7KCS7 Cluster: NADH dehydrogenase subunit 1; n=4;
           Dikarya|Rep: NADH dehydrogenase subunit 1 - Pleurotus
           ostreatus (Oyster mushroom) (White-rot fungus)
          Length = 346

 Score = 37.9 bits (84), Expect = 0.29
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = -3

Query: 650 TSIIVFK*ITLRLSVSNYNFLNQYARDCVINYVSALSTLRKCFFCWY--WYR 501
           +SI++F  IT  L +  YN    +  + +IN  S +  L+ C FC++  W+R
Sbjct: 253 SSIVLFSCITAILFLGGYNLPEVFVNNSIINLQSIILGLKTCIFCFFFVWFR 304


>UniRef50_A0CKN5 Cluster: Chromosome undetermined scaffold_2, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_2,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 466

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = -3

Query: 644 IIVFK*ITLRLSVSNYNFLNQYARDCVINYVSALSTLRKCFFCWYWYRNFCASRGRQTES 465
           +I  + I +  +++ Y+FL Q  +  ++  +  ++   KC   W WY  F  + G     
Sbjct: 140 VINIRKIAINETITQYSFLVQGVKILLVLQLMLITMRWKCTIYWSWYTTFSIAWGLLV-- 197

Query: 464 LNFIKHFQFVL 432
           + FI HF F+L
Sbjct: 198 IFFIVHFVFLL 208


>UniRef50_A7S513 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 373

 Score = 33.1 bits (72), Expect = 8.2
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +1

Query: 1   PCMEIMKRNIDDYEEQLVKL 60
           PC EIMKRN  +YEEQ  KL
Sbjct: 350 PCKEIMKRNAKEYEEQKKKL 369


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,031,367
Number of Sequences: 1657284
Number of extensions: 11147088
Number of successful extensions: 23479
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23477
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)