Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31521
         (793 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0660 - 19768165-19769394,19770500-19770752,19771307-197713...    31   0.79 
03_02_0320 + 7437528-7437623,7437725-7437772,7438885-7438994,743...    29   5.6  
11_06_0546 + 24853167-24853880                                         28   9.8  
09_05_0006 - 20030673-20030895,20031432-20031478,20031597-200316...    28   9.8  

>08_02_0660 -
           19768165-19769394,19770500-19770752,19771307-19771372,
           19771524-19771588,19773265-19773343,19773920-19774293
          Length = 688

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 199 WVQ*NGDTQTLRR*TRGAPHVAWKIGGCVFARRPFIARR 83
           WV  NGD +++ R  RG     W   GC      F+ RR
Sbjct: 628 WVAGNGDVESIERVERGEAAGQWDKFGCYLLLESFVLRR 666


>03_02_0320 +
           7437528-7437623,7437725-7437772,7438885-7438994,
           7439651-7439735,7439839-7440115,7440296-7440454,
           7440563-7440666,7440930-7441168,7441265-7441583,
           7441665-7442069,7442157-7442294,7442376-7442555
          Length = 719

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 744 DDLILGV*VNIWTVVRINVLSGFKNLPLDTND 649
           DDL+LG   N W  +  N L  F+NL   T D
Sbjct: 679 DDLLLGDSQNSWNRMMANSLDAFRNLSFFTAD 710


>11_06_0546 + 24853167-24853880
          Length = 237

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 714 IWTVVRINVLSGFKNLPL 661
           +W+  ++N LSG KNLP+
Sbjct: 135 VWSFTKMNSLSGIKNLPM 152


>09_05_0006 -
           20030673-20030895,20031432-20031478,20031597-20031665,
           20032590-20032725,20032900-20033067,20034286-20034354,
           20034535-20034631,20034742-20034820,20035702-20035872
          Length = 352

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = -3

Query: 143 SRCV--EDRRLRVRASAVHRTSVRLLLSPNNLTS 48
           +RC+  E+ RLR +ASA+HR ++ L     N +S
Sbjct: 308 NRCILEENERLREKASALHRENLALRADLRNTSS 341


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,492,510
Number of Sequences: 37544
Number of extensions: 287246
Number of successful extensions: 645
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)