Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31518
(799 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 32 0.51
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 32 0.51
At3g10100.1 68416.m01210 filament protein-related similar to YEA... 29 2.7
At2g04300.1 68415.m00422 leucine-rich repeat protein kinase, put... 29 2.7
At2g47180.1 68415.m05892 galactinol synthase, putative similar t... 29 3.6
At4g20730.1 68417.m03013 filament protein-related similar to Cyt... 29 4.7
At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family... 29 4.7
At3g07420.1 68416.m00884 asparaginyl-tRNA synthetase 2, cytoplas... 29 4.7
At5g23790.1 68418.m02793 galactinol synthase, putative similar t... 28 6.2
At4g26250.1 68417.m03778 galactinol synthase, putative similar t... 28 6.2
At5g50400.1 68418.m06242 calcineurin-like phosphoesterase family... 28 8.3
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 28 8.3
At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing pro... 28 8.3
At1g09350.1 68414.m01046 galactinol synthase, putative contains ... 28 8.3
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 31.9 bits (69), Expect = 0.51
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Frame = +1
Query: 70 DVATDDNLQYQFFPVSSGSVQFKVRAANDAHIAL--TTGPQ------ESDPMYEVMIGGW 225
+ A D+L+++ G V F A ND + G Q ++ P Y V+IG
Sbjct: 16 ECAWSDDLKFR--EAGRGCVAFDAFAHNDVTVVFRENVGTQHYHYKKDNSPHYIVIIGSN 73
Query: 226 GNAKSVIRKNRTKPDKVEIESPGILNGG-EYRGFWVRWDSGIISAGREGEAIPF----IS 390
N + I+ + V+ E+ + E++ +W+ G+IS G+ PF
Sbjct: 74 RNRRLKIQVDGKSV--VDEEASDLCRCSLEFQSYWISIYDGLISIGK--GRYPFQNLVFK 129
Query: 391 WSDPEP-FPVYYVGVCTGW 444
W DP+P V YVG+ + W
Sbjct: 130 WQDPKPNCNVQYVGL-SSW 147
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 31.9 bits (69), Expect = 0.51
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Frame = +1
Query: 70 DVATDDNLQYQFFPVSSGSVQFKVRAANDAHIAL--TTGPQ------ESDPMYEVMIGGW 225
+ A D+L+++ G V F A ND + G Q ++ P Y V+IG
Sbjct: 16 ECAWSDDLKFR--EAGRGCVAFDAFAHNDVTVVFRENVGTQHYHYKKDNSPHYIVIIGSN 73
Query: 226 GNAKSVIRKNRTKPDKVEIESPGILNGG-EYRGFWVRWDSGIISAGREGEAIPF----IS 390
N + I+ + V+ E+ + E++ +W+ G+IS G+ PF
Sbjct: 74 RNRRLKIQVDGKSV--VDEEASDLCRCSLEFQSYWISIYDGLISIGK--GRYPFQNLVFK 129
Query: 391 WSDPEP-FPVYYVGVCTGW 444
W DP+P V YVG+ + W
Sbjct: 130 WQDPKPNCNVQYVGL-SSW 147
>At3g10100.1 68416.m01210 filament protein-related similar to YEAST
NUF1 protein (Spindle poly body spacer protein SPC110)
(SP:P32380) {Saccharomyces cerevisiae}; similar to
Myosin heavy chain, smooth muscle isoform (SMMHC)
(SP:P35749) {Homo sapiens}
Length = 1004
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 407 LSQFTTSESAQAGVPQAPGKSKMERNSILRTG*SISLDLSPLVLWNS-ITADRTTATFPS 583
LSQF + P ++ E N+ L + DL P+V WN+ ITA +T +T S
Sbjct: 70 LSQFDPLIDLEDAYNTQPQYTEAEVNARLLHEDYVEFDLDPVVSWNTEITAKKTLSTTES 129
>At2g04300.1 68415.m00422 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 851
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +1
Query: 193 DPMYEVMIGGWGNAKSVIRKNRTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAG 360
D ++ + +G ++S + T+ D V +PG L+ YR W+ S + S G
Sbjct: 675 DEHFQAKLADFGLSRSFPLEGETRVDTVVAGTPGYLDPEYYRTNWLNEKSDVYSFG 730
>At2g47180.1 68415.m05892 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 GI:5608497 from
[Ajuga reptans]
Length = 344
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 634 WENT-QSVIRYCRQKPDKVTIPTPGIMNP 717
W +T Q IRYC+Q PDKV P + P
Sbjct: 159 WSHTPQYKIRYCQQCPDKVQWPKAELGEP 187
>At4g20730.1 68417.m03013 filament protein-related similar to
Cytadherence high molecular weight protein 2 (SP:P47460)
[Mycoplasma genitalium]; similar to YEAST NUF1
protein (Spindle poly body spacer protein SPC110)
(SP:P32380) {Saccharomyces cerevisiae}; also
SP|Q9UKX2|MYH2_HUMAN Myosin heavy chain, skeletal
muscle, SP|P31732|OV71_ONCVO Muscle cell intermediate
filament protein SP|P12882|MYH1_HUMAN Myosin heavy
chain, skeletal muscle,. SP|Q17107|AV71_ACAVI Muscle
cell intermediate filament protein
Length = 800
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 407 LSQFTTSESAQAGVPQAPGKSKMERNSILRTG*SISLDLSPLVLWNS-ITADRTTATFPS 583
L+QF + P ++ E N+ L + DL P+V WN+ ITA +T +T S
Sbjct: 71 LAQFDPLIDLEDAYNTQPQYTEAEVNARLLHEDHVEFDLDPVVSWNTEITAKKTLSTTES 130
>At3g52460.1 68416.m05769 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 300
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 413 GKGSGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSPPLRIPG 288
G G S++D+N P P + P +TQ+ Y P + PG
Sbjct: 16 GPGQNSERDIN--QPPPPPPQSQPPPPQTQQQTYPPVMGYPG 55
>At3g07420.1 68416.m00884 asparaginyl-tRNA synthetase 2, cytoplasmic
/ asparagine-tRNA ligase 2 (SYNC2) nearly identical to
SP|Q9SW95; HMM hit: tRNA synthetases class II
Length = 638
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 208 VMIGGWGNAKSVIRKNRTKPDKVEIESPGILNGGE 312
V+IGGW + ++KN P + +P +GG+
Sbjct: 50 VVIGGWVKSARAVKKNSPPPPLPVVAAPSPSSGGD 84
>At5g23790.1 68418.m02793 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 GI:5608497 from
[Ajuga reptans]; contains Pfam profile: PF01501 glycosyl
transferase family 8
Length = 333
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 634 WENT-QSVIRYCRQKPDKVTIPTPGIMNP 717
W T Q I YC+Q P+KVT P + P
Sbjct: 151 WSKTPQYKIGYCQQSPEKVTWPVESLGAP 179
>At4g26250.1 68417.m03778 galactinol synthase, putative similar to
galactinol synthase, isoform GolS-1 [Ajuga reptans]
GI:5608497; contains Pfam profile: PF01501 glycosyl
transferase family 8
Length = 336
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 634 WENT-QSVIRYCRQKPDKVTIPTPGIMNP 717
W T Q I YC+Q P+KVT P + +P
Sbjct: 154 WSKTPQFKIGYCQQCPEKVTWPVESLGSP 182
>At5g50400.1 68418.m06242 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 611
Score = 27.9 bits (59), Expect = 8.3
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Frame = +1
Query: 184 QESDPMYEVMIGGWGNAKSVIRKNRTK--PDKVEIESPGILNGGEYRGFWVRWDSGIISA 357
Q +D + + GG N V N K + P + G ++ V W SG
Sbjct: 135 QRADFSFALFTGGLSNPTLVSVSNHVSFINPKAPVY-PRLALGKKWDEMTVTWTSGY--- 190
Query: 358 GREGEAIPFISWS 396
GEA+PF+ WS
Sbjct: 191 -NIGEAVPFVEWS 202
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 359 PAEIMPLSQRTQKPRYSPPLRIP 291
P E+ P ++ P+YSPP+ +P
Sbjct: 171 PLELPPFLKKPCPPKYSPPVEVP 193
>At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing
protein similar to meiotic asynaptic mutant 1
[Arabidopsis thaliana] GI:7939627, aysnaptic 1 [Brassica
oleracea var. alboglabra] GI:23506946; contains Pfam
profile PF02301: HORMA domain
Length = 1399
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 407 LSQFTTSESAQAGVPQAPGKSKMERNSILRTG*SISLDLSPLVLWNS-ITADRTTATFPS 583
L+QF + P ++ E N+ L + DL P+V WN+ ITA +T +T S
Sbjct: 662 LAQFDPLIDLEDAYNTQPQYTEAEVNARLLHEDHVEFDLVPVVSWNTEITAKKTLSTTES 721
>At1g09350.1 68414.m01046 galactinol synthase, putative contains
Pfam profile: PF01501 glycosyl transferase family 8
Length = 334
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = +1
Query: 634 WENT-QSVIRYCRQKPDKVTIP 696
W +T Q I YC+Q PDKVT P
Sbjct: 145 WSHTPQYKIGYCQQCPDKVTWP 166
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,417,326
Number of Sequences: 28952
Number of extensions: 436501
Number of successful extensions: 1293
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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