Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31512
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 42 2e-04
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 42 2e-04
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 42 2e-04
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 36 0.016
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 36 0.016
V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy ch... 33 0.11
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 33 0.19
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 33 0.19
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 33 0.19
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.59
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 31 0.59
Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical pr... 27 9.5
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 27 9.5
AF067214-3|AAC17002.1| 211|Caenorhabditis elegans Hypothetical ... 27 9.5
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXXKFRK 123
+K+ ERM DL++KLQQKIKTYKRQ K+R+
Sbjct: 1868 KKSQERMYDLIEKLQQKIKTYKRQIEDAESLASGNLAKYRQ 1908
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQ 72
+KN ER+QDL+DKLQQK+KT K+Q
Sbjct: 1867 KKNFERLQDLIDKLQQKLKTQKKQ 1890
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQ 72
+KN ER+QDL+DKLQQK+KT K+Q
Sbjct: 1867 KKNFERLQDLIDKLQQKLKTQKKQ 1890
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQ 72
+KN ER+QDL+DKLQQK+KT K+Q
Sbjct: 1870 KKNFERLQDLIDKLQQKLKTQKKQ 1893
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 36.3 bits (80), Expect = 0.016
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQ 72
+KN ER+ +LVDKLQ K+K +KRQ
Sbjct: 1871 KKNEERLTELVDKLQCKLKIFKRQ 1894
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 36.3 bits (80), Expect = 0.016
Identities = 15/24 (62%), Positives = 20/24 (83%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQ 72
+KN ER+ +LVDKLQ K+K +KRQ
Sbjct: 1871 KKNEERLTELVDKLQCKLKIFKRQ 1894
>V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy
chain protein.
Length = 91
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 19 MQDLVDKLQQKIKTYKRQ 72
+QDL+DKLQQK+KT K+Q
Sbjct: 1 LQDLIDKLQQKLKTQKKQ 18
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXXKFRK 123
+K +R+Q+ V+KLQQKI+ KRQ KFR+
Sbjct: 1865 KKAFDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFRQ 1905
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein
R06C7.10 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXXKFRK 123
+K +R+Q+ V+KLQQKI+ KRQ KFR+
Sbjct: 1865 KKAFDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFRQ 1905
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQXXXXXXXXXXXXXKFRK 123
+K +R+Q+ V+KLQQKI+ KRQ KFR+
Sbjct: 1865 KKAFDRLQENVEKLQQKIRVQKRQIEEAEEVATQNLSKFRQ 1905
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.59
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQ 72
+KN++++Q+LV+KL K+K K+Q
Sbjct: 1874 KKNYDKLQELVEKLTAKLKLQKKQ 1897
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.59
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQ 72
+KN++++Q+LV+KL K+K K+Q
Sbjct: 1874 KKNYDKLQELVEKLTAKLKLQKKQ 1897
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.59
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +1
Query: 1 RKNHERMQDLVDKLQQKIKTYKRQ 72
+KN++++Q+LV+KL K+K K+Q
Sbjct: 1874 KKNYDKLQELVEKLTAKLKLQKKQ 1897
>Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical
protein F47G4.2 protein.
Length = 710
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 418 ILNMQFFFFCKPNKNIYTLGI 480
+LN FF FCK N+Y+L I
Sbjct: 149 LLNPDFFQFCKSFPNLYSLDI 169
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 331 CSGTFRNLRAPGRT*VGRC 275
C GTFRNL G+ +G C
Sbjct: 471 CCGTFRNLTVSGQNPIGYC 489
>AF067214-3|AAC17002.1| 211|Caenorhabditis elegans Hypothetical
protein F56C3.5 protein.
Length = 211
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 284 HLGSTWRPKISKRSTTKHKNGLYRFFVENVTFY 382
H P+I KR + K+ NG++ F+ + FY
Sbjct: 170 HCSENMGPEI-KRMSIKYNNGIFYLFINLIDFY 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,485,998
Number of Sequences: 27780
Number of extensions: 196968
Number of successful extensions: 601
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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