Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31510
         (746 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41557-8|AAA83308.2|  229|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U23484-1|AAC46766.2|  459|Caenorhabditis elegans Hypothetical pr...    28   8.1  
AF040647-10|AAB94993.1|  124|Caenorhabditis elegans Hypothetical...    28   8.1  
AF016433-10|AAB65387.1|  338|Caenorhabditis elegans Seven tm rec...    28   8.1  

>U41557-8|AAA83308.2|  229|Caenorhabditis elegans Hypothetical
           protein C50F7.1a protein.
          Length = 229

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = -3

Query: 531 SKNVFKVTMQFFKYHVQ-CTNQKCHSFLFSNVNLWLKLEKSFILFKSLY 388
           SKN F++  Q   Y  + CT+Q      F  VNL L     F L   LY
Sbjct: 13  SKNAFQIVWQEGSYGYRLCTSQTDQKLYFLFVNLLLAFIVPFGLISGLY 61


>U23484-1|AAC46766.2|  459|Caenorhabditis elegans Hypothetical
           protein EEED8.6 protein.
          Length = 459

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -3

Query: 570 PDIFTP*ILWSMHSKNVFKVTMQFFKYHVQCTNQKCHSFLFSNVNLWLKLEKSFILFKSL 391
           P I+    L + +  N    T+ +   H    +QK + FL+ NVN+    EKS   F+ L
Sbjct: 275 PSIYAVKNLLTQYDNNPQAQTVIYVDLHAH--SQKPNCFLYGNVNMSAVEEKS--TFRQL 330

Query: 390 YLYH 379
           +L H
Sbjct: 331 WLPH 334


>AF040647-10|AAB94993.1|  124|Caenorhabditis elegans Hypothetical
           protein F54D12.2 protein.
          Length = 124

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 465 CHSFLFSNVNLWLKLEKSFILFKSLYLYHSIRY 367
           C + ++ NV  W+KL       KSL  Y +++Y
Sbjct: 46  CRNVMYGNVTSWIKLLAKLPKSKSLLNYIAVKY 78


>AF016433-10|AAB65387.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 130 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 498 FKYHVQCTNQKCHSFLFSNVNLWL 427
           F+Y   C N K H F   NV LWL
Sbjct: 111 FRYIAVCKNNKLHYFEGINVYLWL 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,628,834
Number of Sequences: 27780
Number of extensions: 315232
Number of successful extensions: 637
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)