Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31509
(702 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 96 4e-20
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 96 4e-20
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 95 1e-19
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 87 2e-17
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 87 2e-17
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 87 2e-17
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 86 5e-17
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 85 9e-17
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 84 2e-16
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 84 2e-16
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 84 2e-16
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 83 4e-16
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 83 4e-16
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 70 3e-12
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 58 2e-08
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 56 6e-08
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 56 6e-08
AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein. 44 2e-04
AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 40 0.002
AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 40 0.002
AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 40 0.002
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 33 0.38
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 33 0.38
AY075400-1|AAL68230.1| 810|Drosophila melanogaster LD29741p pro... 32 0.87
AY058390-1|AAL13619.1| 640|Drosophila melanogaster GH15748p pro... 32 0.87
AE014134-3028|AAF53750.1| 810|Drosophila melanogaster CG10492-P... 32 0.87
AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5... 31 2.0
Z14974-1|CAA78696.1| 615|Drosophila melanogaster Cpo 61.1 protein. 29 4.6
Z14312-1|CAA78664.1| 536|Drosophila melanogaster Cpo 61.2 protein. 29 4.6
Z14311-1|CAA78663.1| 490|Drosophila melanogaster Cpo 17 protein. 29 4.6
AE014297-2429|AAX52961.1| 490|Drosophila melanogaster CG31243-P... 29 4.6
AE014297-2428|AAX52960.1| 535|Drosophila melanogaster CG31243-P... 29 4.6
AE014297-2427|AAN13754.4| 615|Drosophila melanogaster CG31243-P... 29 4.6
AE014297-2426|AAF55484.5| 615|Drosophila melanogaster CG31243-P... 29 4.6
AE014297-2425|AAF55485.5| 615|Drosophila melanogaster CG31243-P... 29 4.6
AE014297-2424|AAF55483.5| 738|Drosophila melanogaster CG31243-P... 29 4.6
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b... 29 6.1
AF299248-1|AAG22814.1| 2836|Drosophila melanogaster talin protein. 29 8.1
AE014296-1476|AAF50399.1| 2836|Drosophila melanogaster CG6831-PA... 29 8.1
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 96.3 bits (229), Expect = 4e-20
Identities = 61/186 (32%), Positives = 94/186 (50%), Gaps = 7/186 (3%)
Frame = +1
Query: 10 IKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELD-VELGKADLLEQ 186
IK+++QT DHR ++ YL +++TY L+ + L+VV++GI + E+ +A L +
Sbjct: 261 IKLQIQTEADHRIVTKYLNDAGKNYYTYQLKSCKGLQVVLKGIEATVTPAEIIEA-LKAK 319
Query: 187 GFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGKK------IFNTQTVCRLSGIAVEAPHK 348
F + + + + P + + L+P + K I+N Q + I VE PHK
Sbjct: 320 NFSAKTAINI-LNKDKVPQPLFKIELEPELQALKKNEVHPIYNLQYLLHRR-ITVEEPHK 377
Query: 349 KGTPSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHP 528
+ P QC NCQ YGH+ C + CV C H TA C ++ K C C + H
Sbjct: 378 RINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKN-KDDKSVKKCSNC-GEKHT 435
Query: 529 ANYRGC 546
ANYRGC
Sbjct: 436 ANYRGC 441
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 96.3 bits (229), Expect = 4e-20
Identities = 61/186 (32%), Positives = 94/186 (50%), Gaps = 7/186 (3%)
Frame = +1
Query: 10 IKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELD-VELGKADLLEQ 186
IK+++QT DHR ++ YL +++TY L+ + L+VV++GI + E+ +A L +
Sbjct: 105 IKLQIQTEADHRIVTKYLNDAGKNYYTYQLKSCKGLQVVLKGIEATVTPAEIIEA-LKAK 163
Query: 187 GFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGKK------IFNTQTVCRLSGIAVEAPHK 348
F + + + + P + + L+P + K I+N Q + I VE PHK
Sbjct: 164 NFSAKTAINI-LNKDKVPQPLFKIELEPELQALKKNEVHPIYNLQYLLHRR-ITVEEPHK 221
Query: 349 KGTPSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHP 528
+ P QC NCQ YGH+ C + CV C H TA C ++ K C C + H
Sbjct: 222 RINPVQCTNCQEYGHTKAYCTLKSVCVVCSEPHTTANCPKN-KDDKSVKKCSNC-GEKHT 279
Query: 529 ANYRGC 546
ANYRGC
Sbjct: 280 ANYRGC 285
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 94.7 bits (225), Expect = 1e-19
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 5/175 (2%)
Frame = +1
Query: 43 RALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLEQGFPVNSVH---- 210
R + ++L E FH Y L+E+R RV ++G+ K +L + G V +H
Sbjct: 175 RTIVNWLEIEEYEFHCYQLKEDRPYRVCVKGLHHSTLHHQIKDELEKIGHKVLDIHTPLR 234
Query: 211 RMHTGRGR-EPYNMVLVTLQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQCHNCQSY 387
R G + P NM + + K+I + +C + + +E K+ QCH CQ
Sbjct: 235 RNEPGTSKASPVNMFFLNIAAAANNKEILAVKALCHMR-VVIEPLRKRNAIVQCHRCQQI 293
Query: 388 GHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANYRGCPR 552
GH+++ C CVKC G+H C R E +C C Q HPANY+GC +
Sbjct: 294 GHTAKYCRKAHICVKCAGEHPAKDCTR---PRIELCTCYNCGGQ-HPANYKGCSK 344
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 87.0 bits (206), Expect = 2e-17
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Frame = +1
Query: 4 NGIKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLE 183
NG++I+ + + + L + T + ER RV+IR + +LL+
Sbjct: 526 NGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLK 585
Query: 184 QGFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGK--KIFNTQTVCRLSGIAVEAPHKKGT 357
GF V M P M V + +G KI + + + + +E ++
Sbjct: 586 LGFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGG-QRVDIERKNRTRD 644
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANY 537
P QC+ CQ + H+ +C PRC+KC G+H ++ C K T P +CV C Q H + Y
Sbjct: 645 PVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCT---KPRTTPATCVNCSGQ-HISAY 700
Query: 538 RGCPRAPKINRHVARQN 588
+GCP + +A N
Sbjct: 701 KGCPTYKAEKQKLAANN 717
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 87.0 bits (206), Expect = 2e-17
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Frame = +1
Query: 4 NGIKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLE 183
N I+I+ +T D H A+ + L + I H++ + + ++VIR + + + ++ L +
Sbjct: 673 NNIRIQAKTMDAHNAIQNVLLEANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQD 732
Query: 184 QGFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGT-- 357
G + M R P + V + P +G + + L G V+ K+ +
Sbjct: 733 IGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHL-KVLLLKSLGGQTVKVERKRVSKD 791
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANY 537
P+QCH CQ +GH+ C +C+KC HAT C K P +C C H ++Y
Sbjct: 792 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCT---KPKNLPATCANC-NGSHVSSY 847
Query: 538 RGCP 549
+GCP
Sbjct: 848 KGCP 851
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 87.0 bits (206), Expect = 2e-17
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 2/197 (1%)
Frame = +1
Query: 4 NGIKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLE 183
NG++I+ + + + L + T + ER RV+IR + +LL+
Sbjct: 504 NGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLK 563
Query: 184 QGFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGK--KIFNTQTVCRLSGIAVEAPHKKGT 357
GF V M P M V + +G KI + + + + +E ++
Sbjct: 564 LGFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGG-QRVDIERKNRTRE 622
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANY 537
P QC+ CQ + H+ +C PRC+KC G+H ++ C K T P +CV C Q H + Y
Sbjct: 623 PVQCYRCQGFRHAKNSCMRPPRCMKCAGEHLSSCCT---KPRTTPATCVNCSGQ-HISAY 678
Query: 538 RGCPRAPKINRHVARQN 588
+GCP + +A N
Sbjct: 679 KGCPAYKAEKQKLAANN 695
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 85.8 bits (203), Expect = 5e-17
Identities = 57/200 (28%), Positives = 88/200 (44%), Gaps = 5/200 (2%)
Frame = +1
Query: 4 NGIKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLE 183
NG++I+ + + + L T + ER RV+IR + +LL+
Sbjct: 541 NGVRIQAKDMTAYNKIKEVLTANGFPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLK 600
Query: 184 QGFPVNSVHRMH---TGRGREPYNMVLVTLQPTPEGKKIFNTQTVCRLSGIAVEAPHKKG 354
GF M TG + + +V + + GK I ++ +L G V+ K
Sbjct: 601 LGFQARFARNMTNPATGGPMRMFEVEIVMAKDSSHGKII----SLKQLGGQRVDIERKNR 656
Query: 355 T--PSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHP 528
T P QC+ CQ + HS +C PRC+KC G H ++ C K T P +CV C + H
Sbjct: 657 TREPVQCYRCQGFRHSKNSCMRPPRCMKCAGGHLSSCCT---KPRTTPATCVNCSGE-HI 712
Query: 529 ANYRGCPRAPKINRHVARQN 588
+ Y+GCP R +A N
Sbjct: 713 SAYKGCPAYKTEKRKLAVNN 732
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 85.0 bits (201), Expect = 9e-17
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 2/197 (1%)
Frame = +1
Query: 4 NGIKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLE 183
NG++I+ + + L T + ER RVVIR + +LL+
Sbjct: 534 NGVRIQAKDMTAFNKIKEVLVANGFPLFTNQPKSERGFRVVIRHLHHSTPCSWIVEELLK 593
Query: 184 QGFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGK--KIFNTQTVCRLSGIAVEAPHKKGT 357
GF V M P M V + +G KI + + + + +E ++
Sbjct: 594 LGFQARFVRNMTNPATGGPMRMFEVEIAMAKDGSHDKIISLKQIGG-QRVDIERKNRTRE 652
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANY 537
P QC+ CQ + H+ +C PRC+KC GDH ++ C + T P +CV C + H + Y
Sbjct: 653 PVQCYRCQGFRHAKNSCMKPPRCMKCAGDHLSSCCTKPRST---PATCVNCSGE-HISAY 708
Query: 538 RGCPRAPKINRHVARQN 588
+GCP + +A N
Sbjct: 709 KGCPTYKAEKQKLAANN 725
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 84.2 bits (199), Expect = 2e-16
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Frame = +1
Query: 4 NGIKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLE 183
N I+I+ +T D ++A+ + L I H++ + + ++VIR + + + ++ L +
Sbjct: 596 NNIRIQAKTMDAYKAIQNVLLGANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQD 655
Query: 184 QGFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGT-- 357
G + M R P + V + P +G + + L G V+ K+ +
Sbjct: 656 IGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHL-KVLLLKSLGGQTVKVERKRVSKD 714
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANY 537
P+QCH CQ +GH+ C +C+KC HAT C K P +C C H ++Y
Sbjct: 715 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCT---KPKNLPATCANC-NGSHVSSY 770
Query: 538 RGCP 549
+GCP
Sbjct: 771 KGCP 774
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 84.2 bits (199), Expect = 2e-16
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Frame = +1
Query: 4 NGIKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLE 183
N I+I+ +T D ++A+ + L I H++ + + ++VIR + + + ++ L +
Sbjct: 596 NNIRIQAKTMDAYKAIQNVLLGANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQD 655
Query: 184 QGFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGT-- 357
G + M R P + V + P +G + + L G V+ K+ +
Sbjct: 656 IGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHL-KVLLLKSLGGQTVKVERKRVSKD 714
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANY 537
P+QCH CQ +GH+ C +C+KC HAT C K P +C C H ++Y
Sbjct: 715 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCT---KPKNLPATCANC-NGSHVSSY 770
Query: 538 RGCP 549
+GCP
Sbjct: 771 KGCP 774
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 83.8 bits (198), Expect = 2e-16
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Frame = +1
Query: 4 NGIKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLE 183
N I+I+ +T D + A+ + L + I H++ + + ++VIR + + + ++ L +
Sbjct: 673 NNIRIQAKTMDAYNAIQNVLLEANIPLHSHQPKSAKGFQIVIRHLHQSTPTKWIESQLQD 732
Query: 184 QGFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGT-- 357
G + M R P + V + P +G + + L G V+ K+ +
Sbjct: 733 IGIATKFIRAMQFRDTRNPMRIHEVEVVPKADGSHL-KVLLIKSLGGQTVKVERKRVSKD 791
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANY 537
P+QCH CQ +GH+ C +C+KC HA+ C K P +C C H ++Y
Sbjct: 792 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHASVSCT---KPKNLPATCANC-NGSHVSSY 847
Query: 538 RGCP 549
+GCP
Sbjct: 848 KGCP 851
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 83.0 bits (196), Expect = 4e-16
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Frame = +1
Query: 4 NGIKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLE 183
NG++I+ + + + L + T + ER RV+IR + +LL+
Sbjct: 119 NGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLK 178
Query: 184 QGFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGK--KIFNTQTVCRLSGIAVEAPHKKGT 357
GF V M P M V + +G KI + + + + +E ++
Sbjct: 179 LGFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGG-QRVDIERKNRTRE 237
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANY 537
P QC+ CQ + H+ +C PRC+K G+H ++ C K T P +CV C Q H + Y
Sbjct: 238 PVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCT---KPRTTPATCVNCSGQ-HISAY 293
Query: 538 RGCPRAPKINRHVARQN 588
+GCP + +A N
Sbjct: 294 KGCPAYKAEKQKLAANN 310
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 83.0 bits (196), Expect = 4e-16
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 2/197 (1%)
Frame = +1
Query: 4 NGIKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLE 183
NG++I+ + + + L + T + ER RV+IR + +LL+
Sbjct: 119 NGVRIQAKDMTAYNKIKEVLVANGLPLFTNQPKSERGFRVIIRHLHHSTPCSWIVEELLK 178
Query: 184 QGFPVNSVHRMHTGRGREPYNMVLVTLQPTPEGK--KIFNTQTVCRLSGIAVEAPHKKGT 357
GF V M P M V + +G KI + + + + +E ++
Sbjct: 179 LGFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGG-QRVDIERKNRTRE 237
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANY 537
P QC+ CQ + H+ +C PRC+K G+H ++ C K T P +CV C Q H + Y
Sbjct: 238 PVQCYRCQGFRHAKNSCMRPPRCMKSAGEHLSSCCT---KPRTTPATCVNCSGQ-HISAY 293
Query: 538 RGCPRAPKINRHVARQN 588
+GCP + +A N
Sbjct: 294 KGCPAYKAEKQKLAANN 310
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 70.1 bits (164), Expect = 3e-12
Identities = 40/93 (43%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +1
Query: 325 IAVEAPHKKGTPSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCV 504
I VE PHK+ P QC NCQ YGH+ C P CV C H + C + + A E C
Sbjct: 26 ITVEEPHKRNAPVQCTNCQEYGHTRSYCTLAPVCVVCGDLHDSKQCQINKENACE-KKCN 84
Query: 505 LCQTQGHPANYRGCP--RAPKINRHVARQNRLR 597
C H ANYRGCP + KI H R N R
Sbjct: 85 NC-GGNHTANYRGCPIYKELKIRLH-KRMNTAR 115
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 57.6 bits (133), Expect = 2e-08
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +1
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANY 537
P+QCH CQ +GH+ C +C+KC HAT C K P +C C H ++Y
Sbjct: 2 PTQCHRCQCFGHTKNYCRNPFKCMKCGQLHATVSCT---KPKNLPATCANC-NGSHVSSY 57
Query: 538 RGCP 549
+GCP
Sbjct: 58 KGCP 61
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 55.6 bits (128), Expect = 6e-08
Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 19/205 (9%)
Frame = +1
Query: 13 KIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLEQGF 192
+I PD R L K F + L+EE+ RVV++GI + + + G+
Sbjct: 238 RIYTANPDAFRTAVKELNKLNCQFWHHQLKEEKPYRVVLKGIHANVPSSQIEQAFSDHGY 297
Query: 193 PVNSVH----------------RMHTGRGREPYNMVLVTLQPTPEGKKIFNTQTVCRLSG 324
V +++ T + N+ + L+ P K+ + R
Sbjct: 298 EVLNIYCPRKSDWKNIQVNEDDNEATKNFKTRQNLFYINLKQGPNVKESLKITRLGRYR- 356
Query: 325 IAVEAPHKKGTPSQCHNCQSYGHSSRNCHARPRCVKCLGDHAT--ALCARDLKTATEPPS 498
+ VE ++ QC CQ +GHS C P C KC G H T ALC D+
Sbjct: 357 VTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFALCISDVCL------ 410
Query: 499 CVLCQTQGHPANYRGCP-RAPKINR 570
C+ C H + + CP RA K +
Sbjct: 411 CINCGGD-HVSTDKSCPVRAEKAKK 434
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 55.6 bits (128), Expect = 6e-08
Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 19/205 (9%)
Frame = +1
Query: 13 KIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELGKADLLEQGF 192
+I PD R L K F + L+EE+ RVV++GI + + + G+
Sbjct: 272 RIYTANPDAFRTAVKELNKLNCQFWHHQLKEEKPYRVVLKGIHANVPSSQIEQAFSDHGY 331
Query: 193 PVNSVH----------------RMHTGRGREPYNMVLVTLQPTPEGKKIFNTQTVCRLSG 324
V +++ T + N+ + L+ P K+ + R
Sbjct: 332 EVLNIYCPRKSDWKNIQVNEDDNEATKNFKTRQNLFYINLKQGPNVKESLKITRLGRYR- 390
Query: 325 IAVEAPHKKGTPSQCHNCQSYGHSSRNCHARPRCVKCLGDHAT--ALCARDLKTATEPPS 498
+ VE ++ QC CQ +GHS C P C KC G H T ALC D+
Sbjct: 391 VTVERATRRKELLQCQRCQIFGHSKNYCAQDPICGKCSGPHMTGFALCISDVCL------ 444
Query: 499 CVLCQTQGHPANYRGCP-RAPKINR 570
C+ C H + + CP RA K +
Sbjct: 445 CINCGGD-HVSTDKSCPVRAEKAKK 468
>AJ302712-1|CAC16870.1| 433|Drosophila melanogaster gag protein.
Length = 433
Score = 44.0 bits (99), Expect = 2e-04
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVKC-LGDHATALCARDLKTATEPPSCVLCQTQGHPAN 534
P +C +CQ GH+S++C P CV C L H C R C C Q HPA+
Sbjct: 201 PMRCKSCQLLGHTSKHCKNPPACVSCNLAPHLPVPCTRIF--------CANCTGQ-HPAS 251
Query: 535 YRGCPR 552
CP+
Sbjct: 252 SPECPQ 257
>AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p
protein.
Length = 165
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 364 QCHNCQSYGHSSRNC-HARPRCVKCLG-DHATALCARDLKTATEPPSCVLCQTQGHPANY 537
+C+ C +GH +R C RC +C G H + C T + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTGHWV-- 108
Query: 538 RGCPRA 555
R CP A
Sbjct: 109 RNCPEA 114
>AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p
protein.
Length = 165
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 364 QCHNCQSYGHSSRNC-HARPRCVKCLG-DHATALCARDLKTATEPPSCVLCQTQGHPANY 537
+C+ C +GH +R C RC +C G H + C T + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTGHWV-- 108
Query: 538 RGCPRA 555
R CP A
Sbjct: 109 RNCPEA 114
>AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA
protein.
Length = 165
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 364 QCHNCQSYGHSSRNC-HARPRCVKCLG-DHATALCARDLKTATEPPSCVLCQTQGHPANY 537
+C+ C +GH +R C RC +C G H + C T + P+C C GH
Sbjct: 56 KCYKCNQFGHFARACPEEAERCYRCNGIGHISKDC-----TQADNPTCYRCNKTGHWV-- 108
Query: 538 RGCPRA 555
R CP A
Sbjct: 109 RNCPEA 114
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 33.1 bits (72), Expect = 0.38
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +1
Query: 367 CHNCQSYGHSSRNCHARPRCVKCLGDHATAL-----CARDLKTATEPPS 498
C NC + GH R+C + C C G H T L + + ++T PP+
Sbjct: 464 CLNCFARGHQLRDCTSMHSCFTCKGRHHTLLHRSPPNSENASSSTSPPT 512
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 33.1 bits (72), Expect = 0.38
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 367 CHNCQSYGHSSRNCHARPRCVKCLGD 444
C C +GH ++ C A PRC+ C D
Sbjct: 431 CLRCGEHGHKAKGCVAPPRCLICSSD 456
>AY075400-1|AAL68230.1| 810|Drosophila melanogaster LD29741p
protein.
Length = 810
Score = 31.9 bits (69), Expect = 0.87
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 244 NMVLVTLQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQ---CHNCQSYGHSSRNC 408
N V V PTP+ +++ +T L+ + GT + C+NC S HS R C
Sbjct: 699 NAVSVQTVPTPQQQQVPSTTPYSALTVCPITGAGGGGTAPKVISCYNCGSQTHSGREC 756
>AY058390-1|AAL13619.1| 640|Drosophila melanogaster GH15748p
protein.
Length = 640
Score = 31.9 bits (69), Expect = 0.87
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 244 NMVLVTLQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQ---CHNCQSYGHSSRNC 408
N V V PTP+ +++ +T L+ + GT + C+NC S HS R C
Sbjct: 529 NAVSVQTVPTPQQQQVPSTTPYSALTVCPITGAGGGGTAPKVISCYNCGSQTHSGREC 586
>AE014134-3028|AAF53750.1| 810|Drosophila melanogaster CG10492-PA
protein.
Length = 810
Score = 31.9 bits (69), Expect = 0.87
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 244 NMVLVTLQPTPEGKKIFNTQTVCRLSGIAVEAPHKKGTPSQ---CHNCQSYGHSSRNC 408
N V V PTP+ +++ +T L+ + GT + C+NC S HS R C
Sbjct: 699 NAVSVQTVPTPQQQQVPSTTPYSALTVCPITGAGGGGTAPKVISCYNCGSQTHSGREC 756
>AF198084-1|AAF04860.1| 1081|Drosophila melanogaster semaphorin 5C
protein.
Length = 1081
Score = 30.7 bits (66), Expect = 2.0
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Frame = +1
Query: 355 TPSQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQ----- 519
TPS+ CQ+ G S R CH R + G++ C T PSC Q +
Sbjct: 101 TPSEIAMCQAKGQSERWCHNYVRVLHSYGENQLYACG----TNAFQPSCSWRQMENLTVT 156
Query: 520 GHPANYRGCPRAPKIN 567
G + CP P+ N
Sbjct: 157 GVDSGVVKCPFHPQAN 172
>Z14974-1|CAA78696.1| 615|Drosophila melanogaster Cpo 61.1 protein.
Length = 615
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 347 KKALLASAITVNRTGTLPVTVTRAPDVLS 433
+KA+ S+I + R TLP T AP VLS
Sbjct: 80 EKAITISSIAIKRRPTLPQTPASAPQVLS 108
>Z14312-1|CAA78664.1| 536|Drosophila melanogaster Cpo 61.2 protein.
Length = 536
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 347 KKALLASAITVNRTGTLPVTVTRAPDVLS 433
+KA+ S+I + R TLP T AP VLS
Sbjct: 80 EKAITISSIAIKRRPTLPQTPASAPQVLS 108
>Z14311-1|CAA78663.1| 490|Drosophila melanogaster Cpo 17 protein.
Length = 490
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 347 KKALLASAITVNRTGTLPVTVTRAPDVLS 433
+KA+ S+I + R TLP T AP VLS
Sbjct: 80 EKAITISSIAIKRRPTLPQTPASAPQVLS 108
>AE014297-2429|AAX52961.1| 490|Drosophila melanogaster CG31243-PH,
isoform H protein.
Length = 490
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 347 KKALLASAITVNRTGTLPVTVTRAPDVLS 433
+KA+ S+I + R TLP T AP VLS
Sbjct: 80 EKAITISSIAIKRRPTLPQTPASAPQVLS 108
>AE014297-2428|AAX52960.1| 535|Drosophila melanogaster CG31243-PG,
isoform G protein.
Length = 535
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 347 KKALLASAITVNRTGTLPVTVTRAPDVLS 433
+KA+ S+I + R TLP T AP VLS
Sbjct: 80 EKAITISSIAIKRRPTLPQTPASAPQVLS 108
>AE014297-2427|AAN13754.4| 615|Drosophila melanogaster CG31243-PF,
isoform F protein.
Length = 615
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 347 KKALLASAITVNRTGTLPVTVTRAPDVLS 433
+KA+ S+I + R TLP T AP VLS
Sbjct: 80 EKAITISSIAIKRRPTLPQTPASAPQVLS 108
>AE014297-2426|AAF55484.5| 615|Drosophila melanogaster CG31243-PB,
isoform B protein.
Length = 615
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 347 KKALLASAITVNRTGTLPVTVTRAPDVLS 433
+KA+ S+I + R TLP T AP VLS
Sbjct: 80 EKAITISSIAIKRRPTLPQTPASAPQVLS 108
>AE014297-2425|AAF55485.5| 615|Drosophila melanogaster CG31243-PA,
isoform A protein.
Length = 615
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 347 KKALLASAITVNRTGTLPVTVTRAPDVLS 433
+KA+ S+I + R TLP T AP VLS
Sbjct: 80 EKAITISSIAIKRRPTLPQTPASAPQVLS 108
>AE014297-2424|AAF55483.5| 738|Drosophila melanogaster CG31243-PE,
isoform E protein.
Length = 738
Score = 29.5 bits (63), Expect = 4.6
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 347 KKALLASAITVNRTGTLPVTVTRAPDVLS 433
+KA+ S+I + R TLP T AP VLS
Sbjct: 80 EKAITISSIAIKRRPTLPQTPASAPQVLS 108
>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
calmodulin-binding transcriptionactivator protein.
Length = 2009
Score = 29.1 bits (62), Expect = 6.1
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Frame = +1
Query: 4 NGIKIKVQTPDDHRALSSYLRKERISFHTYTLQEERELRVVIRGIPKELDVELG---KAD 174
N +KIK Q L+S + + Y L++ER + +RG L + +G +A+
Sbjct: 1479 NALKIKTQAQQTPLDLASMRGHKVLLAQMYRLEKERCRKPQLRGGLANLSMNMGVEAEAE 1538
Query: 175 LLEQGFPV--NSVHRMHTGRGREPYNMVLVTLQPTPEGKKIFNTQTVCRLSGIAVEAPHK 348
Q F + R H G P + + + Q P G ++ ++ SGI ++ K
Sbjct: 1539 EQHQSFSAFDLELQRKHDGVFLRP--VAVHSNQSPPNGSSRYSKRSSID-SGINMDIRSK 1595
Query: 349 KGTP 360
G P
Sbjct: 1596 SGKP 1599
>AF299248-1|AAG22814.1| 2836|Drosophila melanogaster talin protein.
Length = 2836
Score = 28.7 bits (61), Expect = 8.1
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
Frame = +1
Query: 331 VEAPHKKGTPSQCHNCQSYGHSS-RNCHARPRCV--KCLGDHATALCARDL--KTATEPP 495
+ AP GTP+ + QSY SS + ++ P V K + A C +DL KT +
Sbjct: 2671 ISAPTTTGTPTNTNYQQSYESSSIKTLNSSPPAVPKKPTVNRNLAACVQDLHDKTFGQGG 2730
Query: 496 SCVLCQTQGHPA-NYRGCPRAPKINRHVARQNRLRASGPDIKASVP 630
L G+P NY G + N +S ++ A P
Sbjct: 2731 VVQLTGGNGYPGQNYEGYTSRYETRNFDKSANNTTSSSSELGAVKP 2776
>AE014296-1476|AAF50399.1| 2836|Drosophila melanogaster CG6831-PA
protein.
Length = 2836
Score = 28.7 bits (61), Expect = 8.1
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
Frame = +1
Query: 331 VEAPHKKGTPSQCHNCQSYGHSS-RNCHARPRCV--KCLGDHATALCARDL--KTATEPP 495
+ AP GTP+ + QSY SS + ++ P V K + A C +DL KT +
Sbjct: 2671 ISAPTTTGTPTNTNYQQSYESSSIKTLNSSPPAVPKKPTVNRNLAACVQDLHDKTFGQGG 2730
Query: 496 SCVLCQTQGHPA-NYRGCPRAPKINRHVARQNRLRASGPDIKASVP 630
L G+P NY G + N +S ++ A P
Sbjct: 2731 VVQLTGGNGYPGQNYEGYTSRYETRNFDKSANNTTSSSSELGAVKP 2776
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,790,050
Number of Sequences: 53049
Number of extensions: 681193
Number of successful extensions: 1903
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1874
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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