Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31509
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 36 0.021
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 36 0.021
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 36 0.021
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 36 0.028
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 35 0.065
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 35 0.065
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 35 0.065
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 35 0.065
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 35 0.065
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 35 0.065
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.46
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 31 0.60
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 31 0.80
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 31 0.80
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 31 1.1
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 30 1.4
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 30 1.4
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 30 1.4
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 30 1.8
Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 4.3
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 4.3
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 28 5.6
AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical ... 28 7.4
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 27 9.8
U88175-3|AAB42280.1| 295|Caenorhabditis elegans Hypothetical pr... 27 9.8
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 27 9.8
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +1
Query: 352 GTPSQCHNCQSYGHSSRNCHARPR-CVKCLGD--HATALCARDLKTATEPPSCV 504
G + C NC+ YGH + C A R C C GD H CA K + P+ V
Sbjct: 199 GISNTCFNCKKYGHRATECSAPQRECANC-GDPNHRANECASWSKNGVQEPTKV 251
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 367 CHNCQSYGHSSRNCHARPR-CVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANYR 540
C C GH C +RPR C C G+H T C + AT P+ +Q +N+R
Sbjct: 348 CFGCLRSGHQRSKC-SRPRTCNHCKGNHHTVFCQSHNRNATRNPNQREFGSQQMNSNHR 405
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +1
Query: 352 GTPSQCHNCQSYGHSSRNCHARPR-CVKCLGD--HATALCARDLKTATEPPSCV 504
G + C NC+ YGH + C A R C C GD H CA K + P+ V
Sbjct: 199 GISNTCFNCKKYGHRATECSAPQRECANC-GDPNHRANECASWSKNGVQEPTKV 251
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 35.9 bits (79), Expect = 0.028
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
Frame = +1
Query: 331 VEAPHKKGTPSQ---CHNCQSYGHSSRNCHARPRCVKCLGD--HATALCARDLKTATEPP 495
+ H K T SQ CHNC GH + C P + D H L K
Sbjct: 191 IAVSHAKPTYSQAITCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDV 250
Query: 496 SCVLCQTQGHPAN--YRGCPRAPKINRHVARQNR 591
+C C +GH AN ++G H+A + R
Sbjct: 251 TCYKCGEKGHYANRCHKGALAFLSNTAHLAHEQR 284
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 292 FNTQTVCRLSGIAVEAPHKKGTPSQCHNCQSYGHSSRNC 408
FN Q S E P K+ P C+NCQ GH+SR C
Sbjct: 161 FNCQQPGHRSSDCPE-PRKEREPRVCYNCQQPGHTSREC 198
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 358 PSQCHNCQSYGHSSRNCHARPR-CVKC 435
P +C NC+ GH S C PR C C
Sbjct: 241 PMKCFNCKGEGHRSAECPEPPRGCFNC 267
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 292 FNTQTVCRLSGIAVEAPHKKGTPSQCHNCQSYGHSSRNC 408
FN Q S E P K+ P C+NCQ GH+SR+C
Sbjct: 260 FNCQQPGHRSNDCPE-PKKEREPRVCYNCQQPGHNSRDC 297
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 292 FNTQTVCRLSGIAVEAPHKKGTPSQCHNCQSYGHSSRNC 408
FN Q S E P K+ P C+NCQ GH+SR+C
Sbjct: 374 FNCQQPGHRSNDCPE-PKKEREPRVCYNCQQPGHNSRDC 411
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 358 PSQCHNCQSYGHSSRNCHARPR-CVKC 435
P +C NC+ GH S C PR C C
Sbjct: 452 PMKCFNCKGEGHRSAECPEPPRGCFNC 478
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = +1
Query: 361 SQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANYR 540
+ C NCQ GH S +C + K EP C CQ GH N R
Sbjct: 257 NNCFNCQQPGHRSNDCP-------------------EPKKEREPRVCYNCQQPGH--NSR 295
Query: 541 GCP--RAPKINRH 573
CP R P+ R+
Sbjct: 296 DCPEERKPREGRN 308
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = +1
Query: 361 SQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANYR 540
+ C NCQ GH S +C + K EP C CQ GH N R
Sbjct: 371 NNCFNCQQPGHRSNDCP-------------------EPKKEREPRVCYNCQQPGH--NSR 409
Query: 541 GCP--RAPKINRH 573
CP R P+ R+
Sbjct: 410 DCPEERKPREGRN 422
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 292 FNTQTVCRLSGIAVEAPHKKGTPSQCHNCQSYGHSSRNC 408
FN Q S E P K+ P C+NCQ GH+SR+C
Sbjct: 260 FNCQQPGHRSNDCPE-PKKEREPRVCYNCQQPGHNSRDC 297
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 292 FNTQTVCRLSGIAVEAPHKKGTPSQCHNCQSYGHSSRNC 408
FN Q S E P K+ P C+NCQ GH+SR+C
Sbjct: 374 FNCQQPGHRSNDCPE-PKKEREPRVCYNCQQPGHNSRDC 411
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 358 PSQCHNCQSYGHSSRNCHARPR-CVKC 435
P +C NC+ GH S C PR C C
Sbjct: 452 PMKCFNCKGEGHRSAECPEPPRGCFNC 478
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = +1
Query: 361 SQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANYR 540
+ C NCQ GH S +C + K EP C CQ GH N R
Sbjct: 257 NNCFNCQQPGHRSNDCP-------------------EPKKEREPRVCYNCQQPGH--NSR 295
Query: 541 GCP--RAPKINRH 573
CP R P+ R+
Sbjct: 296 DCPEERKPREGRN 308
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = +1
Query: 361 SQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANYR 540
+ C NCQ GH S +C + K EP C CQ GH N R
Sbjct: 371 NNCFNCQQPGHRSNDCP-------------------EPKKEREPRVCYNCQQPGH--NSR 409
Query: 541 GCP--RAPKINRH 573
CP R P+ R+
Sbjct: 410 DCPEERKPREGRN 422
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 292 FNTQTVCRLSGIAVEAPHKKGTPSQCHNCQSYGHSSRNC 408
FN Q S E P K+ P C+NCQ GH+SR C
Sbjct: 161 FNCQQPGHRSSDCPE-PRKEREPRVCYNCQQPGHTSREC 198
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 358 PSQCHNCQSYGHSSRNCHARPR-CVKC 435
P +C NC+ GH S C PR C C
Sbjct: 241 PMKCFNCKGEGHRSAECPEPPRGCFNC 267
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 292 FNTQTVCRLSGIAVEAPHKKGTPSQCHNCQSYGHSSRNC 408
FN Q S E P K+ P C+NCQ GH+SR C
Sbjct: 161 FNCQQPGHRSSDCPE-PRKEREPRVCYNCQQPGHTSREC 198
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 358 PSQCHNCQSYGHSSRNCHARPR-CVKC 435
P +C NC+ GH S C PR C C
Sbjct: 241 PMKCFNCKGEGHRSAECPEPPRGCFNC 267
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 292 FNTQTVCRLSGIAVEAPHKKGTPSQCHNCQSYGHSSRNC 408
FN Q S E P K+ P C+NCQ GH+SR+C
Sbjct: 260 FNCQQPGHRSNDCPE-PKKEREPRVCYNCQQPGHNSRDC 297
Score = 34.7 bits (76), Expect = 0.065
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 292 FNTQTVCRLSGIAVEAPHKKGTPSQCHNCQSYGHSSRNC 408
FN Q S E P K+ P C+NCQ GH+SR+C
Sbjct: 374 FNCQQPGHRSNDCPE-PKKEREPRVCYNCQQPGHNSRDC 411
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +1
Query: 358 PSQCHNCQSYGHSSRNCHARPR-CVKC 435
P +C NC+ GH S C PR C C
Sbjct: 452 PMKCFNCKGEGHRSAECPEPPRGCFNC 478
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = +1
Query: 361 SQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANYR 540
+ C NCQ GH S +C + K EP C CQ GH N R
Sbjct: 257 NNCFNCQQPGHRSNDCP-------------------EPKKEREPRVCYNCQQPGH--NSR 295
Query: 541 GCP--RAPKINRH 573
CP R P+ R+
Sbjct: 296 DCPEERKPREGRN 308
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = +1
Query: 361 SQCHNCQSYGHSSRNCHARPRCVKCLGDHATALCARDLKTATEPPSCVLCQTQGHPANYR 540
+ C NCQ GH S +C + K EP C CQ GH N R
Sbjct: 371 NNCFNCQQPGHRSNDCP-------------------EPKKEREPRVCYNCQQPGH--NSR 409
Query: 541 GCP--RAPKINRH 573
CP R P+ R+
Sbjct: 410 DCPEERKPREGRN 422
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.46
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +1
Query: 424 CVKC--LGDH--ATALCARDLKTATEPPSCVLCQTQGHPANYRGCPRAPKINRHVARQNR 591
C +C +G H + +L + K PP C C GH + Y CP+ +I+R +Q +
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTY--CPK--RIDRVQQQQTQ 636
Query: 592 LRASGPDIK 618
+S D++
Sbjct: 637 PNSSVNDVE 645
>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
protein C38D9.3 protein.
Length = 1496
Score = 31.5 bits (68), Expect = 0.60
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +1
Query: 367 CHNCQSYGHSSRNCHARPRCVKCLGDHATALCAR 468
C NC + H + C + C C+G H + C +
Sbjct: 731 CANCLNPHHDIKKCRSYRSCAYCMGKHHSGACPK 764
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 31.1 bits (67), Expect = 0.80
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +1
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVK--CLGDHATALCARDLKTATEPPS-CVLCQTQGHP 528
P CHNC GH S+ C +P+ + C A D P C C +GH
Sbjct: 569 PRGCHNCGEEGHISKECD-KPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHF 627
Query: 529 ANYRGCPRAPK 561
A P+ P+
Sbjct: 628 AVDCDQPKVPR 638
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 31.1 bits (67), Expect = 0.80
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +1
Query: 358 PSQCHNCQSYGHSSRNCHARPRCVK--CLGDHATALCARDLKTATEPPS-CVLCQTQGHP 528
P CHNC GH S+ C +P+ + C A D P C C +GH
Sbjct: 569 PRGCHNCGEEGHISKECD-KPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHF 627
Query: 529 ANYRGCPRAPK 561
A P+ P+
Sbjct: 628 AVDCDQPKVPR 638
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +1
Query: 367 CHNCQSYGHSSRNCHARPRCVKCLGDHATALCAR 468
C NC + H C + C C+G H + C +
Sbjct: 692 CANCLNPHHDIEKCRSYRSCAYCMGKHHSGACPK 725
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 349 KGTPSQCHNCQSYGHSSRNC 408
+G P C +CQ +GH SR C
Sbjct: 164 RGGPGHCFHCQEHGHISRMC 183
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = +1
Query: 367 CHNCQSYGHSSRNCHARPRCVKCLGDHATALCAR 468
C NC + H C + C C+G H + C +
Sbjct: 692 CANCLNPHHDIEKCRSYRSCAYCMGKHHSGACPK 725
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 367 CHNCQSYGHSSRNCHARPR 423
C NC + GH R+C RPR
Sbjct: 115 CENCGAMGHQKRDCFDRPR 133
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 361 SQCHNCQSYGHSSRNCHARPRCVKCLGDHATALC 462
++C C HSS C++ +C C G H A C
Sbjct: 648 NRCAVCAGERHSSSMCYSTLKCTYCSGRHHPAGC 681
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 352 GTPSQCHNCQSYGHSSRNC 408
G S C+NCQ GH SR+C
Sbjct: 32 GGGSTCYNCQETGHFSRDC 50
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 367 CHNCQSYGHSSRNC 408
C+ CQ GH SRNC
Sbjct: 6 CYKCQQPGHISRNC 19
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.8
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 364 QCHNCQSYGHSSRNC 408
QCH C++ GH +RNC
Sbjct: 575 QCHYCKNVGHMARNC 589
>Z48007-1|CAA88052.1| 1140|Caenorhabditis elegans Hypothetical protein
R134.1 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 67 KERISFHTYTLQEE--RELRVVIRGIPKELDVELGKAD-LLEQGFPVNSVHRMHTGRGRE 237
K + H + + EE L V + KEL +E KAD LL + P R+ G+ E
Sbjct: 830 KSNLMDHVFNMLEEYTSTLEVEVEERTKELTLEKKKADLLLSRMLPKQVAERLKAGQTVE 889
Query: 238 PYNMVLVTL 264
P VT+
Sbjct: 890 PEGFDSVTV 898
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +1
Query: 346 KKGTPSQCHN------CQSYGHSSRNCHARPRCVKCLGDHATALCARDLK------TATE 489
++GTP+ C C HS R C + RC+ C + C R K T
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGS 1054
Query: 490 PPSCVLCQTQG 522
P C C G
Sbjct: 1055 PYDCTPCPCPG 1065
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +1
Query: 346 KKGTPSQCHN------CQSYGHSSRNCHARPRCVKCLGDHATALCARDLK------TATE 489
++GTP+ C C HS R C + RC+ C + C R K T
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGS 1054
Query: 490 PPSCVLCQTQG 522
P C C G
Sbjct: 1055 PYDCTPCPCPG 1065
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +1
Query: 346 KKGTPSQCHN------CQSYGHSSRNCHARPRCVKCLGDHATALCARDLK------TATE 489
++GTP+ C C HS R C + RC+ C + C R K T
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGS 1054
Query: 490 PPSCVLCQTQG 522
P C C G
Sbjct: 1055 PYDCTPCPCPG 1065
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +1
Query: 346 KKGTPSQCHN------CQSYGHSSRNCHARPRCVKCLGDHATALCARDLK------TATE 489
++GTP+ C C HS R C + RC+ C + C R K T
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGS 1054
Query: 490 PPSCVLCQTQG 522
P C C G
Sbjct: 1055 PYDCTPCPCPG 1065
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical protein
ZC101.2b protein.
Length = 1160
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +1
Query: 346 KKGTPSQCHN------CQSYGHSSRNCHARPRCVKCLGDHATALCARDLK------TATE 489
++GTP+ C C HS R C + RC+ C + C R K T
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGS 1054
Query: 490 PPSCVLCQTQG 522
P C C G
Sbjct: 1055 PYDCTPCPCPG 1065
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +1
Query: 346 KKGTPSQCHN------CQSYGHSSRNCHARPRCVKCLGDHATALCARDLK------TATE 489
++GTP+ C C HS R C + RC+ C + C R K T
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGS 1054
Query: 490 PPSCVLCQTQG 522
P C C G
Sbjct: 1055 PYDCTPCPCPG 1065
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +1
Query: 346 KKGTPSQCHN------CQSYGHSSRNCHARPRCVKCLGDHATALCARDLK------TATE 489
++GTP+ C C HS R C + RC+ C + C R K T
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGS 1054
Query: 490 PPSCVLCQTQG 522
P C C G
Sbjct: 1055 PYDCTPCPCPG 1065
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +1
Query: 346 KKGTPSQCHN------CQSYGHSSRNCHARPRCVKCLGDHATALCARDLK------TATE 489
++GTP+ C C HS R C + RC+ C + C R K T
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGS 1054
Query: 490 PPSCVLCQTQG 522
P C C G
Sbjct: 1055 PYDCTPCPCPG 1065
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +1
Query: 346 KKGTPSQCHN------CQSYGHSSRNCHARPRCVKCLGDHATALCARDLK------TATE 489
++GTP+ C C HS R C + RC+ C + C R K T
Sbjct: 995 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGS 1054
Query: 490 PPSCVLCQTQG 522
P C C G
Sbjct: 1055 PYDCTPCPCPG 1065
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 12/71 (16%)
Frame = +1
Query: 346 KKGTPSQCHN------CQSYGHSSRNCHARPRCVKCLGDHATALCARDLK------TATE 489
++GTP+ C C HS R C + RC+ C + C R K T
Sbjct: 994 RRGTPNDCQPEATRAPCHCNNHSPRGCDSFGRCLLCEHNTEGTHCERCKKGYYGDATKGS 1053
Query: 490 PPSCVLCQTQG 522
P C C G
Sbjct: 1054 PYDCTPCPCPG 1064
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Frame = +1
Query: 346 KKGTPSQCHNCQSYGHSSRNCHARPR------CVKCLG-DHATALCARDLKTATEPPSCV 504
+K T S C +C+ GH +C R C KC +H+ C + +C
Sbjct: 224 QKITGSACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCF 283
Query: 505 LCQTQGH 525
+C+ GH
Sbjct: 284 VCKQVGH 290
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 349 KGTP-SQCHNCQSYGHSSRNCH 411
KG P + C C+ GH SR+CH
Sbjct: 275 KGFPYATCFVCKQVGHISRDCH 296
>AC006671-6|AAF39916.1| 411|Caenorhabditis elegans Hypothetical
protein K08A2.1 protein.
Length = 411
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 398 PVTVTRAPDVLSVWAITPRPSALA-T*KPRRNRLAASCVKHRVTP 529
P V APDV S TP+PS A T P R AA+ H+ P
Sbjct: 259 PSPVPTAPDVTSESPATPQPSPPAVTPPPPRLLPAATTESHQTEP 303
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 539 VVAPEPLK*IATWPAKTASELPAQTSKPRYP 631
V APEP A PA A+ +PAQ + P P
Sbjct: 192 VPAPEPAPEAAPAPAPEAAPVPAQDAAPAAP 222
>U88175-3|AAB42280.1| 295|Caenorhabditis elegans Hypothetical
protein F21F3.3 protein.
Length = 295
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 642 LRHRGYRGFDVWAGSSEAVLAGHVA 568
+RH GY G+ +WA S++ VL ++
Sbjct: 220 MRHPGYFGWFIWAVSTQIVLCNPIS 244
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 367 CHNCQSYGHSSRNC 408
C+ CQ GH SRNC
Sbjct: 6 CYKCQQPGHISRNC 19
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,023,206
Number of Sequences: 27780
Number of extensions: 319742
Number of successful extensions: 1112
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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