Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31508
         (358 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21 pro...   117   9e-27
CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.               117   9e-27
BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21 p...   117   9e-27
AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21 p...   117   9e-27
AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21 p...   117   9e-27
AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21 p...   117   9e-27
BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.       113   1e-25
AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21 p...    87   2e-17
AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21 p...    75   6e-14
BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.        63   3e-10
AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21 p...    63   3e-10
X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation f...    58   6e-09

>L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score =  117 bits (282), Expect = 9e-27
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = +1

Query: 1   GEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGES 180
           GEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIRRMGES
Sbjct: 6   GEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGES 65

Query: 181 DDCIVRLTKKDGILAKNY 234
           DD I+RL K DGI++KN+
Sbjct: 66  DDSILRLAKADGIVSKNF 83


>CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.
          Length = 83

 Score =  117 bits (282), Expect = 9e-27
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = +1

Query: 1   GEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGES 180
           GEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIRRMGES
Sbjct: 6   GEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGES 65

Query: 181 DDCIVRLTKKDGILAKNY 234
           DD I+RL K DGI++KN+
Sbjct: 66  DDSILRLAKADGIVSKNF 83


>BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score =  117 bits (282), Expect = 9e-27
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = +1

Query: 1   GEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGES 180
           GEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIRRMGES
Sbjct: 6   GEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGES 65

Query: 181 DDCIVRLTKKDGILAKNY 234
           DD I+RL K DGI++KN+
Sbjct: 66  DDSILRLAKADGIVSKNF 83


>AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score =  117 bits (282), Expect = 9e-27
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = +1

Query: 1   GEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGES 180
           GEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIRRMGES
Sbjct: 6   GEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGES 65

Query: 181 DDCIVRLTKKDGILAKNY 234
           DD I+RL K DGI++KN+
Sbjct: 66  DDSILRLAKADGIVSKNF 83


>AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score =  117 bits (282), Expect = 9e-27
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = +1

Query: 1   GEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGES 180
           GEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIRRMGES
Sbjct: 6   GEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGES 65

Query: 181 DDCIVRLTKKDGILAKNY 234
           DD I+RL K DGI++KN+
Sbjct: 66  DDSILRLAKADGIVSKNF 83


>AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score =  117 bits (282), Expect = 9e-27
 Identities = 53/78 (67%), Positives = 63/78 (80%)
 Frame = +1

Query: 1   GEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGES 180
           GEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIRRMGES
Sbjct: 6   GEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGES 65

Query: 181 DDCIVRLTKKDGILAKNY 234
           DD I+RL K DGI++KN+
Sbjct: 66  DDSILRLAKADGIVSKNF 83


>BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.
          Length = 81

 Score =  113 bits (273), Expect = 1e-25
 Identities = 52/76 (68%), Positives = 61/76 (80%)
 Frame = +1

Query: 1   GEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGES 180
           GEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIRRMGES
Sbjct: 6   GEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGES 65

Query: 181 DDCIVRLTKKDGILAK 228
           DD I+RL K DGI++K
Sbjct: 66  DDSILRLAKADGIVSK 81


>AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21
           protein.
          Length = 90

 Score = 87.0 bits (206), Expect = 2e-17
 Identities = 39/57 (68%), Positives = 45/57 (78%)
 Frame = +1

Query: 1   GEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRM 171
           GEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIRRM
Sbjct: 6   GEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRM 62


>AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21
           protein.
          Length = 54

 Score = 74.9 bits (176), Expect = 6e-14
 Identities = 34/54 (62%), Positives = 41/54 (75%)
 Frame = +1

Query: 46  NRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTK 207
           NR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIRRMGESDD I+RL K
Sbjct: 1   NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54


>BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.
          Length = 66

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +1

Query: 1   GEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 120
           GEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V    GR
Sbjct: 6   GEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45


>AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21
           protein.
          Length = 66

 Score = 62.9 bits (146), Expect = 3e-10
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +1

Query: 1   GEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 120
           GEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V    GR
Sbjct: 6   GEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45


>X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation
           factor protein.
          Length = 97

 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   GEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 96
           GEFVDLY PRKCSASNR+I AKDHAS+Q+ +A
Sbjct: 6   GEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,468,656
Number of Sequences: 237096
Number of extensions: 764098
Number of successful extensions: 1404
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)