Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31507
(436 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 23 1.3
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 22 2.9
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 22 2.9
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 21 3.8
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 21 6.7
EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine vasopre... 21 6.7
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 6.7
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 6.7
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 6.7
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 6.7
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 21 6.7
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 6.7
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 6.7
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 6.7
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 21 6.7
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 6.7
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 6.7
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 20 8.9
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 23.0 bits (47), Expect = 1.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +2
Query: 374 RAKSLAPLDTIYSYSYGEPIP 436
RA+ + ++Y YG+PIP
Sbjct: 230 RARRKEIAEIAFAYKYGDPIP 250
Score = 20.6 bits (41), Expect = 6.7
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 242 RPALAISAVDDFLRSEATKTFEDETRRIR 328
RPA + DFL S A + F+ T+ +R
Sbjct: 318 RPAAGLLTARDFLASLAFRIFQ-STQYVR 345
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 21.8 bits (44), Expect = 2.9
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 337 SVGANSTGLIFESLGCFGAQEVIDG 263
S G N G I SLG G++ V G
Sbjct: 213 SFGTNLVGGIVRSLGTLGSRVVESG 237
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 21.8 bits (44), Expect = 2.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 300 LSKMRPVEFAPTLRL*STGLALW 368
LS++R +E A LRL + +W
Sbjct: 142 LSRLRRIEIATCLRLSEKQVKIW 164
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 21.4 bits (43), Expect = 3.8
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = -2
Query: 165 HIRVRHESSYRPRCRTVNQF 106
++++ H+ YR CR + F
Sbjct: 25 YLKIYHKEKYRKFCRILKYF 44
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 20.6 bits (41), Expect = 6.7
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 300 LSKMRPVEFAPTLRL*STGLALW 368
L++ R +E A +LRL + +W
Sbjct: 208 LTRRRRIEIAESLRLTERQIKIW 230
>EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine
vasopressin-like peptide protein.
Length = 146
Score = 20.6 bits (41), Expect = 6.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 85 TCRADASCRSHSRIP 41
+C AD SC S + P
Sbjct: 115 SCHADKSCASDDKSP 129
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 20.6 bits (41), Expect = 6.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 218 LDRIAYRRRPALAISAVDD 274
+D I+Y PA IS DD
Sbjct: 528 IDEISYMAPPAPLISQYDD 546
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 6.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 409 VDGVEWC*GLGARHHRASPVDQSRSVGANST 317
V+ + C G AR ++SP + ANST
Sbjct: 7 VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 6.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 409 VDGVEWC*GLGARHHRASPVDQSRSVGANST 317
V+ + C G AR ++SP + ANST
Sbjct: 7 VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 20.6 bits (41), Expect = 6.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 409 VDGVEWC*GLGARHHRASPVDQSRSVGANST 317
V+ + C G AR ++SP + ANST
Sbjct: 7 VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 20.6 bits (41), Expect = 6.7
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 300 LSKMRPVEFAPTLRL*STGLALW 368
L++ R +E A +LRL + +W
Sbjct: 208 LTRRRRIEIAESLRLTERQIKIW 230
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 6.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 409 VDGVEWC*GLGARHHRASPVDQSRSVGANST 317
V+ + C G AR ++SP + ANST
Sbjct: 7 VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 20.6 bits (41), Expect = 6.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 409 VDGVEWC*GLGARHHRASPVDQSRSVGANST 317
V+ + C G AR ++SP + ANST
Sbjct: 7 VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 20.6 bits (41), Expect = 6.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 409 VDGVEWC*GLGARHHRASPVDQSRSVGANST 317
V+ + C G AR ++SP + ANST
Sbjct: 7 VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 20.6 bits (41), Expect = 6.7
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = +3
Query: 300 LSKMRPVEFAPTLRL*STGLALW 368
L++ R +E A +LRL + +W
Sbjct: 208 LTRRRRIEIAESLRLTERQIKIW 230
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 20.6 bits (41), Expect = 6.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 409 VDGVEWC*GLGARHHRASPVDQSRSVGANST 317
V+ + C G AR ++SP + ANST
Sbjct: 7 VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 20.6 bits (41), Expect = 6.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -1
Query: 409 VDGVEWC*GLGARHHRASPVDQSRSVGANST 317
V+ + C G AR ++SP + ANST
Sbjct: 7 VNSLAQCYGQQARDQQSSPGTDYYNPNANST 37
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 20.2 bits (40), Expect = 8.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 222 TESLTDAAQHWPSLPSMTSC 281
TE AA PS PS++SC
Sbjct: 119 TEYKYSAAAPGPSDPSVSSC 138
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,994
Number of Sequences: 336
Number of extensions: 1886
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 9670396
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -