Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31507
         (436 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.       31   1.3  
AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo ...    31   1.3  
BC045743-1|AAH45743.1|  400|Homo sapiens ring finger protein 149...    30   3.0  
BC032328-1|AAH32328.2|  400|Homo sapiens ring finger protein 149...    30   3.0  
BC019355-1|AAH19355.2|  400|Homo sapiens ring finger protein 149...    30   3.0  
AY450390-1|AAR21083.1|  400|Homo sapiens DNA polymerase-transact...    30   3.0  
AK075141-1|BAC11430.1|  400|Homo sapiens protein ( Homo sapiens ...    30   3.0  
AK074985-1|BAC11334.1|  400|Homo sapiens protein ( Homo sapiens ...    30   3.0  
AC013722-2|AAY15089.1|  163|Homo sapiens unknown protein.              30   3.0  

>AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.
          Length = 4186

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 182  GSGSAHPW-SSDELDRIAYRRRPALAISAVDDFL 280
            G+G+A PW SS+EL    Y RR ALA  ++ D L
Sbjct: 1409 GAGAAGPWFSSEELQEQLYVRRAALAARSLLDVL 1442


>AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo 1
            protein.
          Length = 3312

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 182  GSGSAHPW-SSDELDRIAYRRRPALAISAVDDFL 280
            G+G+A PW SS+EL    Y RR ALA  ++ D L
Sbjct: 1339 GAGAAGPWFSSEELQEQLYVRRAALAARSLLDVL 1372


>BC045743-1|AAH45743.1|  400|Homo sapiens ring finger protein 149
           protein.
          Length = 400

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 368 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 249
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>BC032328-1|AAH32328.2|  400|Homo sapiens ring finger protein 149
           protein.
          Length = 400

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 368 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 249
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>BC019355-1|AAH19355.2|  400|Homo sapiens ring finger protein 149
           protein.
          Length = 400

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 368 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 249
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>AY450390-1|AAR21083.1|  400|Homo sapiens DNA
           polymerase-transactivated protein 2 protein.
          Length = 400

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 368 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 249
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>AK075141-1|BAC11430.1|  400|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90660 fis, clone PLACE1004887, weakly similar to
           GOLIATH PROTEIN. ).
          Length = 400

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 368 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 249
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>AK074985-1|BAC11334.1|  400|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90504 fis, clone NT2RP3004090, weakly similar to
           GOLIATH PROTEIN. ).
          Length = 400

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 368 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 249
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399


>AC013722-2|AAY15089.1|  163|Homo sapiens unknown protein.
          Length = 163

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 368 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 249
           P + P  S+PQC   F G     + LL + RS  R   P+
Sbjct: 123 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 162


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,558,204
Number of Sequences: 237096
Number of extensions: 1257693
Number of successful extensions: 4133
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4132
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)