Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31507
         (436 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060997-1|AAL28545.1|  619|Drosophila melanogaster HL01392p pro...    36   0.031
AE014297-1191|AAF54549.3|  619|Drosophila melanogaster CG6544-PA...    36   0.031
AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p pro...    30   1.2  
AE014297-1192|AAF54550.1|   98|Drosophila melanogaster CG6544-PD...    30   1.2  
AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF...    30   1.6  
AY051773-1|AAK93197.1|  389|Drosophila melanogaster LD29918p pro...    27   8.3  
AL109630-14|CAB65878.1|  371|Drosophila melanogaster EG:BACR7A4....    27   8.3  
AE014298-141|AAF45578.3|  389|Drosophila melanogaster CG3021-PA ...    27   8.3  

>AY060997-1|AAL28545.1|  619|Drosophila melanogaster HL01392p
           protein.
          Length = 619

 Score = 35.5 bits (78), Expect = 0.031
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +2

Query: 236 RRRPALAISAVDDFLRSEATKTFEDETRRIRADTAALIHRARS-VVPRAKSLAPLDTIYS 412
           R  P     A+ ++L +E   TF +ET RIR    +LI    + VV RA+S  P   +  
Sbjct: 178 RLPPGYGARALTNYLNTEPFTTFSEETSRIRNRAQSLIRDLHTPVVRRARSCTPF-PVTG 236

Query: 413 YSYGEP 430
           Y+Y EP
Sbjct: 237 YTY-EP 241



 Score = 30.7 bits (66), Expect = 0.89
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +1

Query: 40  MVYESDFYTTRRPYRSTYSVTAELIYRPTSRSVTRLV--TYP 159
           MVYES F TTRR Y S    T+  +  P+   VTR+   +YP
Sbjct: 1   MVYESGF-TTRRTYSSRPVTTSYAVTYPSVEKVTRVYKSSYP 41


>AE014297-1191|AAF54549.3|  619|Drosophila melanogaster CG6544-PA,
           isoform A protein.
          Length = 619

 Score = 35.5 bits (78), Expect = 0.031
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +2

Query: 236 RRRPALAISAVDDFLRSEATKTFEDETRRIRADTAALIHRARS-VVPRAKSLAPLDTIYS 412
           R  P     A+ ++L +E   TF +ET RIR    +LI    + VV RA+S  P   +  
Sbjct: 178 RLPPGYGARALTNYLNTEPFTTFSEETSRIRNRAQSLIRDLHTPVVRRARSCTPF-PVTG 236

Query: 413 YSYGEP 430
           Y+Y EP
Sbjct: 237 YTY-EP 241



 Score = 30.7 bits (66), Expect = 0.89
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +1

Query: 40  MVYESDFYTTRRPYRSTYSVTAELIYRPTSRSVTRLV--TYP 159
           MVYES F TTRR Y S    T+  +  P+   VTR+   +YP
Sbjct: 1   MVYESGF-TTRRTYSSRPVTTSYAVTYPSVEKVTRVYKSSYP 41


>AY070665-1|AAL48136.1|  123|Drosophila melanogaster RH04612p
           protein.
          Length = 123

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 240 AAQHWPSLPSMTSCAPKQPRLSKMRPVEFAPT 335
           +A+HW  LP + SC P  P  ++ RP + AP+
Sbjct: 84  SARHWALLPCILSCVP--PAATRPRPPDPAPS 113


>AE014297-1192|AAF54550.1|   98|Drosophila melanogaster CG6544-PD,
           isoform D protein.
          Length = 98

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +1

Query: 40  MVYESDFYTTRRPYRSTYSVTAELIYRPTSRSVTRL 147
           MVYES F TTRR Y S    T+  +  P+   VTR+
Sbjct: 1   MVYESGF-TTRRTYSSRPVTTSYAVTYPSVEKVTRV 35


>AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF,
           isoform F protein.
          Length = 1918

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +2

Query: 197 HPWSSDELDRIAYRR-RPALAISAVDDF 277
           HPW+    D + +RR R AL ++AV+D+
Sbjct: 84  HPWAGAHFDLVPWRRTRSALDLTAVEDY 111


>AY051773-1|AAK93197.1|  389|Drosophila melanogaster LD29918p
           protein.
          Length = 389

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 316 PSNSRRHCGFDPPGSLCGAARQVLSTT 396
           P+    H   DPP  LC  ++Q+LS T
Sbjct: 281 PALLSTHIAVDPPNWLCSKSQQILSDT 307


>AL109630-14|CAB65878.1|  371|Drosophila melanogaster EG:BACR7A4.8
           protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 316 PSNSRRHCGFDPPGSLCGAARQVLSTT 396
           P+    H   DPP  LC  ++Q+LS T
Sbjct: 281 PALLSTHIAVDPPNWLCSKSQQILSDT 307


>AE014298-141|AAF45578.3|  389|Drosophila melanogaster CG3021-PA
           protein.
          Length = 389

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 316 PSNSRRHCGFDPPGSLCGAARQVLSTT 396
           P+    H   DPP  LC  ++Q+LS T
Sbjct: 281 PALLSTHIAVDPPNWLCSKSQQILSDT 307


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,432,957
Number of Sequences: 53049
Number of extensions: 394427
Number of successful extensions: 1030
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)