Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31507
         (436 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039038-8|AAM81097.1|  874|Caenorhabditis elegans Hypothetical ...    33   0.089
AF039038-7|AAM81098.1|  942|Caenorhabditis elegans Hypothetical ...    33   0.089
AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid deplet...    33   0.089
AF098993-5|AAC67468.1|  325|Caenorhabditis elegans Hypothetical ...    29   1.9  
AF078786-1|AAY43998.1|  102|Caenorhabditis elegans Hypothetical ...    28   2.5  
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro...    27   4.4  
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical...    27   4.4  

>AF039038-8|AAM81097.1|  874|Caenorhabditis elegans Hypothetical
           protein K06A5.8a protein.
          Length = 874

 Score = 33.1 bits (72), Expect = 0.089
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 235 PTPPSTGHLCRR*LLA-LRSNQDFRR*DPSNSRRHCGFDPPGSLCG 369
           PTP    HLC    L  L  ++DF+  +PS++R  C F+    LCG
Sbjct: 143 PTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVEC-FNKVNQLCG 187


>AF039038-7|AAM81098.1|  942|Caenorhabditis elegans Hypothetical
           protein K06A5.8b protein.
          Length = 942

 Score = 33.1 bits (72), Expect = 0.089
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +1

Query: 235 PTPPSTGHLCRR*LLA-LRSNQDFRR*DPSNSRRHCGFDPPGSLCG 369
           PTP    HLC    L  L  ++DF+  +PS++R  C F+    LCG
Sbjct: 143 PTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVEC-FNKVNQLCG 187


>AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid depleted
            protein 3 protein.
          Length = 1599

 Score = 33.1 bits (72), Expect = 0.089
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = -1

Query: 157  GTSRVELPTEMSDGKSVQPSRCRWTCRADASCRSHSRIPWLMLVLS 20
            GT+R  LPT   D KS+QP           S   H R PW  LVL+
Sbjct: 922  GTTRSRLPT---DPKSLQPPAASTASTGSGSFVPHQRKPWTALVLA 964


>AF098993-5|AAC67468.1|  325|Caenorhabditis elegans Hypothetical
           protein T10B11.6 protein.
          Length = 325

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 201 GWADPDPHHVMRHIRVRHESSYR 133
           GWA  +P H+ ++I+V ++  YR
Sbjct: 75  GWAGANPKHIDKYIKVYNDEGYR 97


>AF078786-1|AAY43998.1|  102|Caenorhabditis elegans Hypothetical
           protein M01G5.6 protein.
          Length = 102

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
 Frame = +2

Query: 203 WSSDELDRIAYRRRPALAISAVDDFLRSEAT-----KTFEDETRRIRADT 337
           WS++++D+   R+RP  A+     FLR   T     +  +D+ R I  +T
Sbjct: 20  WSANDVDQWLRRKRPRFALKYAHFFLRHNVTGRVLVEMSDDDLREIGVET 69


>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
           preproprotein protein.
          Length = 1042

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 24/89 (26%), Positives = 30/89 (33%), Gaps = 3/89 (3%)
 Frame = -1

Query: 265 GRDGQCWAASVSDSVQLIXXXXXXXXXXXXRDAAHQGTSRVELPT---EMSDGKSVQPSR 95
           G DGQCW  + SDS Q                   Q T   E        +DG +  P +
Sbjct: 529 GTDGQCWRGNCSDSHQQCQKLWGREARVAEPVCFEQNTKGAEYANCGQRQADG-TYHPCQ 587

Query: 94  CRWTCRADASCRSHSRIPWLMLVLSFGFH 8
              T      C S S  P    + +F FH
Sbjct: 588 IEDTRCGTLHCHSGSITPIDSSLKAFTFH 616


>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
           protein Y37D8A.13 protein.
          Length = 1042

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 24/89 (26%), Positives = 30/89 (33%), Gaps = 3/89 (3%)
 Frame = -1

Query: 265 GRDGQCWAASVSDSVQLIXXXXXXXXXXXXRDAAHQGTSRVELPT---EMSDGKSVQPSR 95
           G DGQCW  + SDS Q                   Q T   E        +DG +  P +
Sbjct: 529 GTDGQCWRGNCSDSHQQCQKLWGREARVAEPVCFEQNTKGAEYANCGQRQADG-TYHPCQ 587

Query: 94  CRWTCRADASCRSHSRIPWLMLVLSFGFH 8
              T      C S S  P    + +F FH
Sbjct: 588 IEDTRCGTLHCHSGSITPIDSSLKAFTFH 616


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,505,354
Number of Sequences: 27780
Number of extensions: 184532
Number of successful extensions: 466
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 466
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)