Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31507
         (436 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   6.0  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   7.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   7.9  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   7.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   7.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   7.9  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   7.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   7.9  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 434 GSVRRMNMSRWCRVVLRTWRAAPQSEP 354
           G VR + + +  R+VL  ++   +SEP
Sbjct: 311 GIVRSLVLDKLARIVLLNFQEERRSEP 337


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 115 KSVQPSRCRWTCRADASCRSHSRIPWLM 32
           KS  P+        DA CR+H   P +M
Sbjct: 42  KSSGPNELGRFKHTDACCRTHDMCPDVM 69


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 115 KSVQPSRCRWTCRADASCRSHSRIPWLM 32
           KS  P+        DA CR+H   P +M
Sbjct: 47  KSSGPNELGRFKHTDACCRTHDMCPDVM 74


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 55  DFYTTRRPYRSTYSVTAEL 111
           +F+TT   +RST  V + L
Sbjct: 342 NFFTTSNGFRSTLPVVSNL 360


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 55  DFYTTRRPYRSTYSVTAEL 111
           +F+TT   +RST  V + L
Sbjct: 311 NFFTTSNGFRSTLPVVSNL 329


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 55  DFYTTRRPYRSTYSVTAEL 111
           +F+TT   +RST  V + L
Sbjct: 362 NFFTTSNGFRSTLPVVSNL 380


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 55  DFYTTRRPYRSTYSVTAEL 111
           +F+TT   +RST  V + L
Sbjct: 311 NFFTTSNGFRSTLPVVSNL 329


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 115 KSVQPSRCRWTCRADASCRSHSRIPWLM 32
           KS  P+        DA CR+H   P +M
Sbjct: 47  KSSGPNELGRFKHTDACCRTHDMCPDVM 74


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,534
Number of Sequences: 438
Number of extensions: 2339
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)