Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31502
(703 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 459 e-129
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 451 e-127
SB_56| Best HMM Match : Actin (HMM E-Value=0) 450 e-127
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 448 e-126
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 352 1e-97
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 239 2e-63
SB_54| Best HMM Match : Actin (HMM E-Value=0) 206 2e-53
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 199 2e-51
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 188 5e-48
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 169 2e-42
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 104 6e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 74 1e-13
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 63 2e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 3e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 56 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 41 0.001
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 31 0.68
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.2
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.6
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 2.1
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 2.8
SB_25537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 6.4
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 8.4
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 8.4
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 8.4
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 459 bits (1131), Expect = e-129
Identities = 214/218 (98%), Positives = 216/218 (99%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 408
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 409 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLD 588
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 589 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 451 bits (1111), Expect = e-127
Identities = 210/218 (96%), Positives = 215/218 (98%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 408
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 409 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLD 588
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIYEGYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 589 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 450 bits (1109), Expect = e-127
Identities = 210/216 (97%), Positives = 214/216 (99%)
Frame = +1
Query: 55 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSK 234
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 235 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 414
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 415 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLDLA 594
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 595 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 217
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 448 bits (1104), Expect = e-126
Identities = 210/215 (97%), Positives = 213/215 (99%)
Frame = +1
Query: 55 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSK 234
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 235 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 414
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 415 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLDLA 594
IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 595 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 699
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 216
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 352 bits (866), Expect = 1e-97
Identities = 176/218 (80%), Positives = 182/218 (83%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 408
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 409 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLD 588
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DS G + H +
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS------------GDGVSHTV---- 164
Query: 589 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
I ERGYSFTTTAEREIVRDIKEKLC
Sbjct: 165 -----------PIYEERGYSFTTTAEREIVRDIKEKLC 191
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 239 bits (585), Expect = 2e-63
Identities = 111/215 (51%), Positives = 151/215 (70%), Gaps = 3/215 (1%)
Frame = +1
Query: 67 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAHSKRG 240
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 241 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 417
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 418 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLDLAG 597
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV H P+YEG+ALPH RLD+AG
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAG 186
Query: 598 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
RD+T YL+K++ RGY+F TA+ E VR +KEKLC
Sbjct: 187 RDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLC 221
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 206 bits (502), Expect = 2e-53
Identities = 92/134 (68%), Positives = 113/134 (84%)
Frame = +1
Query: 301 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 480
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 481 ASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 660
ASGRTTG V D GDGV HTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 661 AEREIVRDIKEKLC 702
AE++I+RD+KE LC
Sbjct: 2249 AEQQIIRDLKETLC 2262
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 16 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 174
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 199 bits (485), Expect = 2e-51
Identities = 95/103 (92%), Positives = 99/103 (96%)
Frame = +1
Query: 394 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHA 573
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 574 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 180
Score = 184 bits (447), Expect = 8e-47
Identities = 83/89 (93%), Positives = 85/89 (95%)
Frame = +1
Query: 55 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSK 234
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 235 RGILTLKYPIEHGIITNWDDMEKIWHHTF 321
RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 188 bits (457), Expect = 5e-48
Identities = 88/96 (91%), Positives = 92/96 (95%)
Frame = +1
Query: 415 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLDLA 594
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGV H VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 595 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
GRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLC
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLC 96
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 169 bits (411), Expect = 2e-42
Identities = 73/116 (62%), Positives = 100/116 (86%)
Frame = +1
Query: 349 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 528
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 529 YHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 696
H+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 104 bits (250), Expect = 6e-23
Identities = 48/126 (38%), Positives = 79/126 (62%)
Frame = +1
Query: 259 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 438
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 439 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLDLAGRDLTDYL 618
PA ++ +VL+ +A+GR+ G+V+DSG VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 619 MKILTE 636
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 460 QAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 636
Q LSLYASG T G+ L SG IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 637 RGYSFTTTAEREIVRDIKEKLC 702
RG++FT+++ +IV DIKEK+C
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKIC 848
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +1
Query: 10 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 189
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 190 --MGQKD-SYVGDEAHSKRGILTL 252
+ KD GD A +K G++ L
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 62.9 bits (146), Expect = 2e-10
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Frame = +1
Query: 454 AIQAVLSLYASG-------RT-TGIVLDSGDGVYHTVPIYEGYALPHAILRLDLAGRDLT 609
A +AVL+L AS RT TG V+DSGDGV H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 610 DYLMKILTERGYSFTTTAEREIVRDIKEK 696
++ ++L ER E + IKE+
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKER 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +1
Query: 73 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 174
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 56.4 bits (130), Expect = 2e-08
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Frame = +1
Query: 64 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKRGI 243
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 244 LTLKY--PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 417
L Y P + G + NWD ++IW +TF E + M +I
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEI 324
Query: 418 MFETFNSPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVYHTVPIYEGYALPHAIL 579
+FE +N A+ A LS Y S +V+D+G H VP++ G + A+
Sbjct: 325 LFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVR 384
Query: 580 R 582
R
Sbjct: 385 R 385
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +1
Query: 187 GMGQKDSYVGDEAHSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 366
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 31.1 bits (67), Expect = 0.90
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 496 TGIVLDSGDGVYHTVPI 546
TG V+DSGDGV H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -2
Query: 171 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 55
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Frame = +1
Query: 304 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 483
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 484 SGRTTGI----VLDSGDGVYHTVPIYEGYALP 567
+GI V D D ++ T Y LP
Sbjct: 572 YSAVSGIVEQRVTDGTDEIHSTDVNLAKYNLP 603
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +2
Query: 80 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 226
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.52
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 44 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 148
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 31.5 bits (68), Expect = 0.68
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = -2
Query: 672 FPFSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----VDTISGVEH 505
F SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 504 DTGGTTGGVQ 475
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 250 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 402
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 391 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 507
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 44 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 148
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -2
Query: 411 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 232
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 231 AM 226
++
Sbjct: 214 SV 215
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 35 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 148
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_25537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -2
Query: 651 ERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVVDTISG 514
E V G+DL +++ + + TED ++V FVD Y ++ ISG
Sbjct: 124 EVVVKDGQDL-KIISDLLMDEYITEDIEWRNVDFVDNYTCLELISG 168
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 379 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 507
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 394 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVP 543
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 29 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 154
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +2
Query: 29 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTP 208
K T ++ ATT + +T PA P P TT P ++ P+ T A TP
Sbjct: 133 KPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPP-----ATTTP 187
Query: 209 TWVTRPI 229
T TRP+
Sbjct: 188 T--TRPL 192
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 44 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 148
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -3
Query: 596 PAKSRRRMAWGRA*PS*MGTVW*TPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 417
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 416 IWVIFSLLALGLR 378
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 176 PWWRGRPTMDGKTARGASSPAKPALHMPEP 87
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 44 SRCATTMLLR-L*STMAPACARPVSPAT 124
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 44 SRCATTMLLR-L*STMAPACARPVSPAT 124
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 44 SRCATTMLLR-L*STMAPACARPVSPAT 124
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,613,080
Number of Sequences: 59808
Number of extensions: 472547
Number of successful extensions: 1632
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1625
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -