Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31502
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 458 e-129
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 457 e-129
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 456 e-129
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 456 e-129
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 456 e-129
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 456 e-129
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 456 e-129
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 456 e-129
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 438 e-123
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 417 e-117
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 363 e-101
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 273 7e-74
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 239 1e-63
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 186 1e-47
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 184 4e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 184 4e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 7e-46
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 179 2e-45
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 125 3e-29
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 70 1e-12
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 70 1e-12
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 58 5e-09
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.60
U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical pr... 31 1.1
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 30 1.4
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 30 1.8
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 1.8
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 2.4
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 28 5.6
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 28 5.6
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 28 5.6
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.4
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 7.4
U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 458 bits (1130), Expect = e-129
Identities = 214/218 (98%), Positives = 216/218 (99%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 408
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 409 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLD 588
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 589 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 457 bits (1126), Expect = e-129
Identities = 212/218 (97%), Positives = 216/218 (99%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 408
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 409 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLD 588
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 589 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 456 bits (1125), Expect = e-129
Identities = 212/218 (97%), Positives = 216/218 (99%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 408
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 409 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLD 588
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 589 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 456 bits (1125), Expect = e-129
Identities = 212/218 (97%), Positives = 216/218 (99%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 408
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 409 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLD 588
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 589 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 456 bits (1125), Expect = e-129
Identities = 212/218 (97%), Positives = 216/218 (99%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 408
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 409 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLD 588
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 589 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 456 bits (1125), Expect = e-129
Identities = 212/218 (97%), Positives = 216/218 (99%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 408
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 409 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLD 588
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 589 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 456 bits (1125), Expect = e-129
Identities = 212/218 (97%), Positives = 216/218 (99%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 408
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 409 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLD 588
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 589 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 456 bits (1125), Expect = e-129
Identities = 212/218 (97%), Positives = 216/218 (99%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 408
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 409 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLD 588
TQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV HTVPIYEGYALPHAILRLD
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 589 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 181 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 438 bits (1079), Expect = e-123
Identities = 201/216 (93%), Positives = 212/216 (98%)
Frame = +1
Query: 55 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSK 234
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 235 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 414
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 415 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLDLA 594
IMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV HTVPIYEGYALPHAI RLDLA
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLA 181
Query: 595 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
GRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLC
Sbjct: 182 GRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLC 217
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 417 bits (1028), Expect = e-117
Identities = 194/200 (97%), Positives = 198/200 (99%)
Frame = +1
Query: 103 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKRGILTLKYPIEHGIIT 282
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA SKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 283 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 462
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 463 AVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 642
AVLSLYASGRTTG+VLDSGDGV HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 184
Query: 643 YSFTTTAEREIVRDIKEKLC 702
YSFTTTAEREIVRDIKEKLC
Sbjct: 185 YSFTTTAEREIVRDIKEKLC 204
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 363 bits (893), Expect = e-101
Identities = 169/174 (97%), Positives = 172/174 (98%)
Frame = +1
Query: 181 MVGMGQKDSYVGDEAHSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPV 360
MVGMGQKDSYVGDEA SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 361 LLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTV 540
LLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 541 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 121 PIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 174
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 273 bits (670), Expect = 7e-74
Identities = 125/220 (56%), Positives = 165/220 (75%), Gaps = 4/220 (1%)
Frame = +1
Query: 55 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 225
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 226 HSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 402
S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 403 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILR 582
+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV H VPI +G+A+ HAI R
Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQR 181
Query: 583 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
+DLAGRD+T+YL +L GY F + E EIVR++KE C
Sbjct: 182 MDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENAC 221
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 239 bits (586), Expect = 1e-63
Identities = 114/213 (53%), Positives = 153/213 (71%), Gaps = 3/213 (1%)
Frame = +1
Query: 73 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAHSKRGIL 246
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 247 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 423
+ YP+++GI+ NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 424 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLDLAGRD 603
E + ++YVA+QAVL+LYA G TG+V+DSGDGV H P+YEG+AL H RLD+AGRD
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRD 188
Query: 604 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
+T YL+K+L +RGY+F +A+ E VR +KEKLC
Sbjct: 189 ITKYLIKLLLQRGYNFNHSADFETVRQMKEKLC 221
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 186 bits (453), Expect = 1e-47
Identities = 84/86 (97%), Positives = 85/86 (98%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKI 306
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 184 bits (449), Expect = 4e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKI 306
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 184 bits (449), Expect = 4e-47
Identities = 83/86 (96%), Positives = 85/86 (98%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDMEKI 306
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (439), Expect = 7e-46
Identities = 81/83 (97%), Positives = 82/83 (98%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 228
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 229 SKRGILTLKYPIEHGIITNWDDM 297
SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 179 bits (435), Expect = 2e-45
Identities = 95/239 (39%), Positives = 135/239 (56%), Gaps = 21/239 (8%)
Frame = +1
Query: 49 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 192
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 193 GQKDSYVGDEAHSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 369
D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 370 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDG 525
E PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDG
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 526 VYHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
V H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IKEK C
Sbjct: 181 VTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFC 239
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 125 bits (302), Expect = 3e-29
Identities = 70/211 (33%), Positives = 119/211 (56%), Gaps = 17/211 (8%)
Frame = +1
Query: 58 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP---------RHQGVMVGMG----- 195
D+V+ LV D GS + GFAG++ P+ PS + + + + G
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 196 --QKDSYVGD-EAHSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 366
+K+ ++G + R ++ ++ G+I +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 367 TEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPI 546
+E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG VP+
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPV 188
Query: 547 YEGYALPHAILRLDLAGRDLTDYLMKILTER 639
++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 189 FDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 70.1 bits (164), Expect = 1e-12
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 4/217 (1%)
Frame = +1
Query: 64 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKRGI 243
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 244 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 423
++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 424 ETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVYHTVPIYEGYALPHAILRLDL 591
+ F ++ + L S + +V+DSG G + +++R+D+
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDV 175
Query: 592 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
G+ LT+ L ++ R + E ++ + KE LC
Sbjct: 176 GGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLC 210
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 70.1 bits (164), Expect = 1e-12
Identities = 52/217 (23%), Positives = 97/217 (44%), Gaps = 4/217 (1%)
Frame = +1
Query: 64 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSKRGI 243
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 244 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 423
++ PIE G + NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 424 ETFNSPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVYHTVPIYEGYALPHAILRLDL 591
+ F ++ + L S + +V+DSG G + +++R+D+
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDV 175
Query: 592 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 702
G+ LT+ L ++ R + E ++ + KE LC
Sbjct: 176 GGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLC 210
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 58.4 bits (135), Expect = 5e-09
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 8/211 (3%)
Frame = +1
Query: 73 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHSK---R 237
L+++ GS +AG + P++ FP+I R + VG +D+Y + H+ R
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVG---EDAYRPEIRHNGDFVR 237
Query: 238 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 417
I +E I D+ K EL+V P ++ VLL+ P ++ QI
Sbjct: 238 PISATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQI 295
Query: 418 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVYHTVPIYEGYALPHAILRLDLAG 597
E + + Q L LYA TTG+V+D G+ V + VP+ +GY + AI +
Sbjct: 296 CLEDIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGS 354
Query: 598 RDLTDYLMKILTERG---YSFTTTAEREIVR 681
+ + D L L+ Y+F + E+ I+R
Sbjct: 355 QQMGDSLRASLSAHNKGLYAFQSPVEKLILR 385
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 527 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 432
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.60
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 80 STMAPACARPVSPATTRPAPSSRP 151
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>U80844-4|AAB37974.1| 192|Caenorhabditis elegans Hypothetical
protein C07D8.2 protein.
Length = 192
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 193 GQKDSYVGDEAHSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 372
GQ +G AH+ G L+ P+EH I T + + +L P E P+L+ +
Sbjct: 67 GQHGQQLGAPAHTNGGTTRLQQPLEHRIQTTTQGVLQ----GKREQLEQGPTETPLLVQQ 122
Query: 373 AP 378
AP
Sbjct: 123 AP 124
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.4
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +1
Query: 277 ITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF-ETFNSPAMYV 453
+ + D + K W T + L + + + PL+ K+ K T I + ET + +
Sbjct: 203 LNHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKSKGIKTTTINYQETAHEKIVET 261
Query: 454 AIQA--VLSLYASGRTTGIVLDSGDGVYHTVPI 546
AI A L LY+ G+ +D GD + VPI
Sbjct: 262 AIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 672 FPFSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 538
F +GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +2
Query: 71 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 178
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 194 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 84
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 636 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVVDT 523
+GED V+G V S T GVG S + D G + T
Sbjct: 75 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSGPIYT 112
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 636 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVVDT 523
+GED V+G V S T GVG S + D G + T
Sbjct: 172 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSGPIYT 209
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 636 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVVDT 523
+GED V+G V S T GVG S + D G + T
Sbjct: 296 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSGPIYT 333
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 103 KAGFAGDDAPRAVFPSIVGRPRHQG 177
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 80 STMAPACARPVSPATTRPAPSSRPSWVALATRA 178
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>U41033-5|AAA82377.1| 675|Caenorhabditis elegans Hypothetical
protein K09E3.1 protein.
Length = 675
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +1
Query: 193 GQKDSYVGDEAHSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 372
GQ +G AH+ G L+ P+E I T + + +L P E P+L+ +
Sbjct: 297 GQHGQQLGAPAHTNGGTTRLQQPLEQWIQTTTQGVLQ----GKREQLEQGPTETPLLVQQ 352
Query: 373 AP 378
AP
Sbjct: 353 AP 354
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 226 HSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE 348
HS LT K I ++ NWD EK W TF+ L+ E
Sbjct: 367 HSTFHQLTHKEEI-FAVLQNWDQTEKDWSPTFWFLLKCIRE 406
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,267,131
Number of Sequences: 27780
Number of extensions: 329846
Number of successful extensions: 1432
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -