Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31498
         (580 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor...   278   6e-74
UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA...    50   5e-05
UniRef50_Q290D6 Cluster: GA15599-PA; n=1; Drosophila pseudoobscu...    40   0.032
UniRef50_Q7PK07 Cluster: ENSANGP00000023169; n=1; Anopheles gamb...    38   0.13 
UniRef50_A1Z8Y3 Cluster: CG30042-PA; n=4; Diptera|Rep: CG30042-P...    36   0.52 
UniRef50_UPI0000D56366 Cluster: PREDICTED: similar to CG30042-PA...    34   2.8  

>UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor;
           n=1; Bombyx mori|Rep: Larval cuticle protein LCP-30
           precursor - Bombyx mori (Silk moth)
          Length = 239

 Score =  278 bits (682), Expect = 6e-74
 Identities = 138/188 (73%), Positives = 139/188 (73%)
 Frame = +2

Query: 17  MRVFLAICLSLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGR 196
           MRVFLAICLSLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGR
Sbjct: 1   MRVFLAICLSLTVALAAETGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGR 60

Query: 197 YIPDNSGAYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEDLSKYLGDAYKGSSIXXXX 376
           YIPDNSGAYN                             KEDLSKYLGDAYKGSSI    
Sbjct: 61  YIPDNSGAYNGDRGDRGAAGGFYTGSGTAGGPGGAYVGTKEDLSKYLGDAYKGSSIVPLP 120

Query: 377 XXXXXXXXXXXXXXXASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLY* 556
                          ASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLY 
Sbjct: 121 VVKPTIPVPVTPTYVASKVVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLYE 180

Query: 557 TDNKILAE 580
           T+NKILAE
Sbjct: 181 TENKILAE 188


>UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 275

 Score = 49.6 bits (113), Expect = 5e-05
 Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
 Frame = +2

Query: 446 YVASKVVPPSGAGY--DYKYGIIRYDNDVAPEGYHYLY*TDNKILAE 580
           YVA+ V   SGAGY  +  Y IIR +  V P+GYHY+Y T+NKIL E
Sbjct: 158 YVATPV-QGSGAGYYDNRNYAIIRKEEQVEPDGYHYVYETENKILGE 203


>UniRef50_Q290D6 Cluster: GA15599-PA; n=1; Drosophila
           pseudoobscura|Rep: GA15599-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 264

 Score = 40.3 bits (90), Expect = 0.032
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +2

Query: 497 YGIIRYDNDVAPEGYHYLY*TDNKILAE 580
           + IIR ++DV  +GYHYLY T+N ILAE
Sbjct: 164 WAIIRLEDDVEQDGYHYLYETENGILAE 191


>UniRef50_Q7PK07 Cluster: ENSANGP00000023169; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000023169 - Anopheles gambiae
           str. PEST
          Length = 232

 Score = 38.3 bits (85), Expect = 0.13
 Identities = 21/50 (42%), Positives = 28/50 (56%)
 Frame = +2

Query: 431 VVTPTYVASKVVPPSGAGYDYKYGIIRYDNDVAPEGYHYLY*TDNKILAE 580
           V T   +A   V P  A     + IIR +N V  +GYHY++ T+N ILAE
Sbjct: 151 VPTLARIAQVKVAPKPAYAPDGWKIIRLENQVENDGYHYVFETENGILAE 200


>UniRef50_A1Z8Y3 Cluster: CG30042-PA; n=4; Diptera|Rep: CG30042-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 259

 Score = 36.3 bits (80), Expect = 0.52
 Identities = 15/28 (53%), Positives = 21/28 (75%)
 Frame = +2

Query: 497 YGIIRYDNDVAPEGYHYLY*TDNKILAE 580
           + IIR ++DV  +GYHYL+ T+N IL E
Sbjct: 159 WAIIRQEDDVEVDGYHYLWETENGILGE 186


>UniRef50_UPI0000D56366 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 210

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 494 KYGIIRYDNDVAPEGYHYLY*TDNKILAE 580
           K+ IIR   DV  +GYH+ Y T+NKI AE
Sbjct: 110 KWKIIRQLGDVDTDGYHWEYETENKIQAE 138


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,150,646
Number of Sequences: 1657284
Number of extensions: 7921543
Number of successful extensions: 24721
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24653
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)