Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31497
         (754 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0202 + 16359539-16359763,16360113-16360193,16361362-163616...    31   0.98 
04_03_0357 + 14852584-14853058,14853116-14855754                       29   4.0  
01_01_1102 - 8734984-8736090,8736430-8736557,8736671-8736708,873...    28   6.9  
06_03_1360 + 29558789-29559020,29559203-29559378,29560285-295603...    28   9.2  
01_06_0705 + 31342236-31342415,31343086-31343391,31343555-313437...    28   9.2  

>02_03_0202 +
           16359539-16359763,16360113-16360193,16361362-16361600,
           16361828-16362029,16362108-16362188,16362272-16362455,
           16362625-16362791,16363020-16363802
          Length = 653

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 568 DPAEIRRFMKSYGTHYIDSFVTG 636
           DPA + RF+K+YGTH I     G
Sbjct: 176 DPAALSRFIKTYGTHIIVEMAVG 198


>04_03_0357 + 14852584-14853058,14853116-14855754
          Length = 1037

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +1

Query: 472 LTKKHRTVELEDLE-GIRVRAYIQRAIDKLDINDPAEIRRFMKSYGT 609
           L K H    LE L+ G R+ A  Q A+D ++ N P  +R   KS GT
Sbjct: 305 LMKAHEAA-LEALKPGNRMSAVYQAAVDVIEKNAPELLRNLTKSAGT 350


>01_01_1102 -
           8734984-8736090,8736430-8736557,8736671-8736708,
           8736815-8737030,8737252-8737413,8738381-8738559,
           8738693-8738799,8738918-8739082,8739201-8739284,
           8739364-8739559
          Length = 793

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -2

Query: 219 AEGDNGFIFHFIVRRDDLSDLRQIAIVREQINGIPNVQSVA 97
           +E +N F+F F +    + ++R +   R + NGI NV S++
Sbjct: 206 SECNNRFLFTFSMLEIYMGNIRDLLAPRSKTNGIKNVPSLS 246


>06_03_1360 +
           29558789-29559020,29559203-29559378,29560285-29560346,
           29560426-29561212,29561516-29562244
          Length = 661

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 346 KIEGTSKPWKAFLGDWIHDE 405
           K E T+KPWK F  D+  D+
Sbjct: 607 KAENTAKPWKKFKNDYKQDQ 626


>01_06_0705 +
           31342236-31342415,31343086-31343391,31343555-31343796,
           31343927-31344122,31344419-31344602,31344984-31345147,
           31345454-31345981,31346530-31346630,31347619-31347634,
           31347834-31347941,31348028-31348078,31349059-31349100,
           31349442-31349541,31350039-31350256,31350367-31350807,
           31350916-31351043,31351131-31351992
          Length = 1288

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 568 DPAEIRRFMKSYGTHYIDSFVTG 636
           DP+ +  F+++YGTH I S   G
Sbjct: 237 DPSALASFIENYGTHIITSVTVG 259


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,975,178
Number of Sequences: 37544
Number of extensions: 344938
Number of successful extensions: 782
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)