Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31491
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    31   0.009
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    26   0.35 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    24   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.5  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   7.6  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 31.1 bits (67), Expect = 0.009
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 531 KERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDT 656
           KE  ++ +RH   K+  D E L+ K+ P+ Q   +YE  V T
Sbjct: 82  KETAEKVIRHLTQKRARDWERLSKKYDPQGQYKKRYEEHVAT 123


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
 Frame = +3

Query: 414 VDKLRQKAQELWECIVKLE-TEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPE 590
           V K     Q +WE       T   D  E   R    +  +KE Q + L    +K+ +   
Sbjct: 144 VSKNNDDEQYVWESSAGGSFTVTQDRGEPLGRGTKIVLHMKEDQTEFLEEHKIKEIVKKH 203

Query: 591 ALTGKHPPKIQVASKYERRVDTRSYDDQKKLFEGDLKKLNK 713
           +    +P K+ V  + E+ +     +++KK  EG+ K  +K
Sbjct: 204 SQFIGYPIKLVVEKEREKELSDDEAEEEKKEEEGEDKDKDK 244


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 560 QSSQEGSRPRSAHRQAPAQNS 622
           QSS+   RPRS+ + AP + +
Sbjct: 232 QSSESSLRPRSSQKSAPGKRT 252


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +3

Query: 333  KTKEQLEEEKK 365
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +3

Query: 333  KTKEQLEEEKK 365
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +3

Query: 333  KTKEQLEEEKK 365
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = +3

Query: 333  KTKEQLEEEKK 365
            KTK++LEEEKK
Sbjct: 1068 KTKKELEEEKK 1078


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +2

Query: 398 HRGSLRRQTPTEGPGTLGVHRQTRDREIRSRREAKE--TGLRLKRAQRK 538
           H+ + + +TP      L + ++ RD++  S  E  E  + LRL   Q K
Sbjct: 112 HKPNRKPRTPFTTQQLLALEKKFRDKQYLSIAERAEFSSSLRLTEPQVK 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,642
Number of Sequences: 336
Number of extensions: 1787
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)