Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31489
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 30 0.95
AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical ... 30 0.95
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 29 1.7
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 29 1.7
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 1.7
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 1.7
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 1.7
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 1.7
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 2.2
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 29 2.9
AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical ... 28 3.9
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z93374-9|CAC70078.1| 116|Caenorhabditis elegans Hypothetical pr... 28 5.1
U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical pr... 28 5.1
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 28 5.1
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 28 5.1
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 28 5.1
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 28 5.1
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF273796-1|AAG15144.1| 116|Caenorhabditis elegans nuclear recep... 28 5.1
AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical ... 28 5.1
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z78413-9|CAB01662.1| 305|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 27 6.7
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 27 6.7
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 27 8.9
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 31.1 bits (67), Expect = 0.55
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 358 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEE 537
D EEK+++ E +KK+ A + KDA +K ++ G + + + K++ E
Sbjct: 411 DAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDAE 470
Query: 538 EKK 546
EKK
Sbjct: 471 EKK 473
Score = 31.1 bits (67), Expect = 0.55
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 358 DIEEKRQRLEEAEKKRQAMLQAMKDAS-KTGPNLTIQKKSENFGLSNAQLERNKTKEQLE 534
D EEK+++ E EKK+ A + KDA + + +KK ++ G + + + K+ E
Sbjct: 419 DAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAG-EKKKKDAEEKKKVAE 477
Query: 535 EEKK 546
EEKK
Sbjct: 478 EEKK 481
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 31.1 bits (67), Expect = 0.55
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 361 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEE 540
+E+K++ +EE EKKR + + A IQ K + Q R++ KE L++
Sbjct: 869 LEDKQKIVEELEKKRDEL--GEEAAKVKARQAEIQSKLDGIFKELVQCHRDEAKESLQKR 926
Query: 541 KKI 549
+K+
Sbjct: 927 QKL 929
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 30.3 bits (65), Expect = 0.95
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 370 KRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEEKK 546
K+Q EEA K + L+ ++ + +KK E + + E K K+ LEEEKK
Sbjct: 554 KKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKR-KAEEEKKKKALEEEKK 611
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 364 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEEK 543
E++R+ LEE +K+Q +A A + +K+ + + E + K + EEEK
Sbjct: 542 EKQRKILEEEARKKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKRKAEEEK 601
Query: 544 K 546
K
Sbjct: 602 K 602
>AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical
protein Y6E2A.8 protein.
Length = 444
Score = 30.3 bits (65), Expect = 0.95
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Frame = +1
Query: 370 KRQRLEEAEKKRQAMLQAMKDASKT---GPNLTIQKKSENFGLSNAQLERNKT--KEQLE 534
KR+ ++ AEK ++A L+ K++SK+ N + K ++ ++A+ K+ KEQ +
Sbjct: 323 KRETMKRAEKMKEAELKKKKESSKSKEEDKNKKKEVKIKSAPKTSAKKSAKKSAKKEQKK 382
Query: 535 EEKKI 549
EKK+
Sbjct: 383 SEKKV 387
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 364 EEKRQRLEEAEKKRQAMLQAMKDAS------KTGPNLTIQKKSENFGLSNAQLERNKTKE 525
EEK Q++ E E+K Q +L K+ + + + I++K E N Q R K E
Sbjct: 208 EEKLQQIREKERKLQELLLRQKEEAEEEALRRLANDSEIEQKLEKIRYENEQQARQKDNE 267
Query: 526 Q 528
Q
Sbjct: 268 Q 268
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 358 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLER 510
D E+ ++ ++E EK + L S GP +T +K+ +NF + + R
Sbjct: 514 DFEDMKEGVKEKEKVKDVDLNLAGWGSWVGPGMTEKKRRQNFVIKAKEKRR 564
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/62 (20%), Positives = 36/62 (58%)
Frame = +1
Query: 358 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEE 537
D+E +++LEE+E ++ +LQ+ K + + +++ ++ +++ + K + Q+ E
Sbjct: 1397 DVEHLQKQLEESEVAKERILQSKKKIQQELEDSSMELENVRASHRDSEKRQKKFESQMAE 1456
Query: 538 EK 543
E+
Sbjct: 1457 ER 1458
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1
Query: 370 KRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEEK 543
K+Q +A+K L+A A K L+I K + FG E + T EQ EEK
Sbjct: 11626 KKQDENDAKKSVSKNLKA--GAKKDSDTLSITSKKDKFGKRQDSREASATVEQQGEEK 11681
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1
Query: 370 KRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEEK 543
K+Q +A+K L+A A K L+I K + FG E + T EQ EEK
Sbjct: 11626 KKQDENDAKKSVSKNLKA--GAKKDSDTLSITSKKDKFGKRQDSREASATVEQQGEEK 11681
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/54 (22%), Positives = 32/54 (59%)
Frame = +1
Query: 364 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKE 525
+EK+Q+L+E EK+R+ + Q ++ + ++ +E+ +++ ++ K +E
Sbjct: 216 KEKKQKLKEMEKRREKLRQKERELLAVSDKVKKEEPAESSDEEDSRKDQRKPRE 269
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +1
Query: 364 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEEK 543
++KR+++EE EK+R + +++ L K +E L + E+ + ++LEE+K
Sbjct: 94 KQKREKMEEREKQRIERERILEE-----KRLEKDKLAEEKRLDKEKKEKERLDKKLEEDK 148
Query: 544 K 546
K
Sbjct: 149 K 149
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 361 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEE 540
+E+ +L + +Q +++ +T T +++S + +SN QLE + +E LEEE
Sbjct: 1301 LEDAEAQLCALNRIKQQQHSQLEELKRTLDQETRERQSLHSQVSNYQLECEQFRESLEEE 1360
Query: 541 K 543
+
Sbjct: 1361 Q 1361
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 364 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEEK 543
E+K ++ E+ ++K + KD K+G +K+ + + + K +E+ E+EK
Sbjct: 121 EKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKKEEKKEEKKEEKKEDEK 180
Query: 544 K 546
K
Sbjct: 181 K 181
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = +1
Query: 364 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEEK 543
EEK+++ +++EKK +A K+ K +K+ + + + E K +++ +E++
Sbjct: 73 EEKKEKSKKSEKKDDKKEEAKKEDDKKDEKKDEKKEDKKDDKKDDKKEEKKEEKKEDEKE 132
Query: 544 K 546
K
Sbjct: 133 K 133
>AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical
protein F57B10.6 protein.
Length = 829
Score = 28.3 bits (60), Expect = 3.9
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = +1
Query: 370 KRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENF------GLSNAQLERNKTKEQL 531
KRQ LE +KRQ +K++ K G L + KKS+ GL + L N KE +
Sbjct: 81 KRQVLEARRQKRQNDDDILKNSKKMG-KLKVLKKSQKIREIASGGLDDVAL-ANAIKEVI 138
Query: 532 EEEKKI 549
KK+
Sbjct: 139 SPSKKV 144
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 364 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEEK 543
E+K + ++ EKK + + +K+ K + +KK + G E + E+ +EEK
Sbjct: 95 EKKEEEKKKEEKKEEEKKEEVKEEEKKDDSKRDEKKKD--GEKKEDDENKEDNEKKKEEK 152
Query: 544 K 546
K
Sbjct: 153 K 153
>Z93374-9|CAC70078.1| 116|Caenorhabditis elegans Hypothetical
protein C06C6.5b protein.
Length = 116
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 361 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENF 483
++EKR+R + K ++ +A+ +S T P+L I + N+
Sbjct: 70 VQEKRERHPPKKNKPPSISEALTSSSSTPPSLPISQLPVNY 110
>U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical
protein M02B7.5 protein.
Length = 640
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 137 SVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNAL 241
S+K +G N+STNG N+ RR+S N+L
Sbjct: 594 SMKLSNGSNSSAGSSNSSTNGVNNSSFRRLSFNSL 628
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/63 (22%), Positives = 32/63 (50%)
Frame = +1
Query: 358 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEE 537
DIEE+ +R+ E + +RQ Q +D + Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 538 EKK 546
++
Sbjct: 321 RER 323
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/63 (22%), Positives = 32/63 (50%)
Frame = +1
Query: 358 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEE 537
DIEE+ +R+ E + +RQ Q +D + Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 538 EKK 546
++
Sbjct: 321 RER 323
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/63 (22%), Positives = 32/63 (50%)
Frame = +1
Query: 358 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEE 537
DIEE+ +R+ E + +RQ Q +D + Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 538 EKK 546
++
Sbjct: 321 RER 323
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/63 (22%), Positives = 32/63 (50%)
Frame = +1
Query: 358 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEE 537
DIEE+ +R+ E + +RQ Q +D + Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 538 EKK 546
++
Sbjct: 321 RER 323
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 367 EKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLS-NAQLERNKTKEQLEEEK 543
E+R++LEE+E RQA L TI + E + N +LER + +E+ E +
Sbjct: 337 ERRRKLEESETARQAELDR---------QATIYAEQERMAMERNRELERIRLEEKKRENE 387
Query: 544 KI 549
++
Sbjct: 388 RV 389
>AF273796-1|AAG15144.1| 116|Caenorhabditis elegans nuclear receptor
NHR-50 protein.
Length = 116
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 361 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENF 483
++EKR+R + K ++ +A+ +S T P+L I + N+
Sbjct: 70 VQEKRERHPPKKNKPPSISEALTSSSSTPPSLPISQLPVNY 110
>AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical
protein C01B12.2 protein.
Length = 374
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = +1
Query: 367 EKRQRLEEAEKKRQAMLQAMKDASKTGP----NLTIQKKSENFGLSNAQLERNKTKEQL 531
E ++R EEAE+K Q A+K +T N TIQ K+ L +E + L
Sbjct: 220 ENQKRQEEAERKLQEKQNAIKCLMETDSVTFWNQTIQSKTSTVVLDRISMELGSLAQNL 278
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 358 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEE 537
D ++K ++ E EKK + + KD K +KKSE + +K + E+
Sbjct: 72 DGDKKSEKKEGDEKKEEKKDEDKKDEKKDEEKKDGEKKSEKKDEKKDDKKDDKKDGKKED 131
Query: 538 EKK 546
EKK
Sbjct: 132 EKK 134
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +1
Query: 361 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEE 540
+EE R+RLE+AE++R + + ++ E+ S+A+ + N ++ +
Sbjct: 239 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 298
Query: 541 K 543
K
Sbjct: 299 K 299
>Z78413-9|CAB01662.1| 305|Caenorhabditis elegans Hypothetical
protein T01C3.9 protein.
Length = 305
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +1
Query: 361 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFG--LSNAQLERNKTKEQLE 534
IEE++QR+EE + R ++ A+ DA+ + + + G +S A + K KE+++
Sbjct: 182 IEEQQQRIEEIRRTRASVPVAISDAANGSAEMVPSNTTGSSGSPMSTAPVPAAK-KEKVQ 240
Query: 535 EE 540
E
Sbjct: 241 YE 242
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +1
Query: 361 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEE 540
+EE R+RLE+AE++R + + ++ E+ S+A+ + N ++ +
Sbjct: 239 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 298
Query: 541 K 543
K
Sbjct: 299 K 299
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +1
Query: 361 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEE 540
+EE R+RLE+AE++R + + ++ E+ S+A+ + N ++ +
Sbjct: 255 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 314
Query: 541 K 543
K
Sbjct: 315 K 315
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 364 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNLTIQKKSENFGLSNAQLERNKTKEQLEEEK 543
EEK++ + EKK ++ K++ + N +KK E G + + K +E E +K
Sbjct: 95 EEKKEEERKEEKKEESKEGEKKNSGEEKKNSGDEKKEEG-GKKDDAKDGEKKEEAKEGDK 153
Query: 544 K 546
K
Sbjct: 154 K 154
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/16 (62%), Positives = 16/16 (100%)
Frame = +1
Query: 361 IEEKRQRLEEAEKKRQ 408
+EEK++RL+EA+KKR+
Sbjct: 543 LEEKKRRLQEAKKKRR 558
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.309 0.125 0.338
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,580,055
Number of Sequences: 27780
Number of extensions: 109781
Number of successful extensions: 521
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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