Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31487
(412 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC947.07 |||ribosome biogenesis protein Rrp14-C|Schizosaccharo... 34 0.010
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 31 0.070
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 30 0.12
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 30 0.12
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 28 0.49
SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces po... 28 0.65
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 27 0.86
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 27 1.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 2.0
SPAC22F3.11c |snu23||U4/U6 x U5 tri-snRNP complex subunit Snu23|... 26 2.6
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 26 2.6
SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomy... 25 3.5
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 25 3.5
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 3.5
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 4.6
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 25 6.1
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 6.1
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 24 8.0
SPBP8B7.13 |||conserved fungal protein|Schizosaccharomyces pombe... 24 8.0
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 24 8.0
SPBC577.05c |rec27|mug41|meiotic recombination protein Rec27|Sch... 24 8.0
SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion transporter|... 24 8.0
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 24 8.0
>SPBC947.07 |||ribosome biogenesis protein
Rrp14-C|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 33.9 bits (74), Expect = 0.010
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
EEKR+++EE++K + +LQA + K N + KKS + + KE+ + EK
Sbjct: 138 EEKRRKIEESDKWHRVLLQA--EGKKLKDNEQLLKKSIRRKEKEKKKSSDAWKERKDNEK 195
Query: 316 KISL 327
K L
Sbjct: 196 KAML 199
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 31.1 bits (67), Expect = 0.070
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE-RNKTKEQLE 306
+ EEK +R E + KR+A +A ++A + ++K++ NA+ E K K + E
Sbjct: 620 EAEEKAKREAEEKAKREAEEKAKREAEEKAKR-EAEEKAKREAEENAKREAEEKAKREAE 678
Query: 307 EEKKISLSIRIKPLTIE 357
E K ++K T E
Sbjct: 679 ENAKREAEEKVKRETEE 695
Score = 29.5 bits (63), Expect = 0.21
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLE-RNKTKEQLE 306
+ EEK +R E + KR+A +A ++A + ++K++ NA+ E K K + E
Sbjct: 636 EAEEKAKREAEEKAKREAEEKAKREAEENAKR-EAEEKAKREAEENAKREAEEKVKRETE 694
Query: 307 EEKK 318
E K
Sbjct: 695 ENAK 698
Score = 27.9 bits (59), Expect = 0.65
Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Frame = +1
Query: 4 KRLKEKQAKRKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQA 183
KR E+QAKR+ + EEK +R E + KR+A
Sbjct: 562 KREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREA 621
Query: 184 MLQAMKDASKTGPNFTIQKKSENFGLSNAQLE-RNKTKEQLEEEKK 318
+A ++A + ++K++ A+ E K K + EE K
Sbjct: 622 EEKAKREAEEKAKR-EAEEKAKREAEEKAKREAEEKAKREAEENAK 666
Score = 27.5 bits (58), Expect = 0.86
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQK-KSENFGLSNAQLERNKTKEQLE 306
+ EEK +R E + KR+A +A ++A + +K K E + + E N +E E
Sbjct: 612 EAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEE 671
Query: 307 EEKK 318
+ K+
Sbjct: 672 KAKR 675
Score = 25.8 bits (54), Expect = 2.6
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 139 EKRQRLEEAEK-KRQAMLQAMKDASKTGPNFTIQK-KSENFGLSNAQLERNKTKEQLEEE 312
E++ RLE E KR+A QA ++A + +K K E + + E N +E E+
Sbjct: 550 EEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKA 609
Query: 313 KK 318
K+
Sbjct: 610 KR 611
Score = 24.2 bits (50), Expect = 8.0
Identities = 19/85 (22%), Positives = 36/85 (42%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
+ EEK +R E KR+A +A ++A + +K + + + K + ++
Sbjct: 652 EAEEKAKREAEENAKREAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKREADK 711
Query: 310 EKKISLSIRIKPLTIEGLSVDKLRQ 384
+I S PL +VD +Q
Sbjct: 712 NPEIKSS---APLASSEANVDTSKQ 733
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 30.3 bits (65), Expect = 0.12
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +1
Query: 142 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE-QLEEEKK 318
++++LE K + LQ ++D KT + S + A LE + E ++EE K
Sbjct: 29 QKEKLEGDLKTQIKKLQRLRDQIKTWAS------SNDIKDKKALLENRRLIEAKMEEFKA 82
Query: 319 ISLSIRIKPLTIEGLSV-DKLRQKAQELWECI 411
+ ++IK + EGLS+ KL K +E + I
Sbjct: 83 VEREMKIKAFSKEGLSIASKLDPKEKEKQDTI 114
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 30.3 bits (65), Expect = 0.12
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKD----ASKTGPNFTIQKKSENFGLSNAQLERNKTKE 297
++EEK LE A+ Q ++ ++KD +K + ++ G+S+A L + K K
Sbjct: 162 ELEEKINSLESAQSIEQEVISSLKDDKTVETKNDVPEVSRPSTDTIGVSSA-LSKKKKKR 220
Query: 298 QLEEEKKISLSIRIKPLT 351
+ +KK S I+ T
Sbjct: 221 NRKNQKKKSTKQNIEATT 238
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 28.3 bits (60), Expect = 0.49
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +1
Query: 154 LEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
+EE E+ R+ + A D + G + +S+ G + +++ KTK+QLEEE+
Sbjct: 197 VEEQERLRKETIAAFHDVN--GNKDAVSNESDEDG--DFLVKKEKTKKQLEEEE 246
>SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 218
Score = 27.9 bits (59), Expect = 0.65
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 312
+ EK+ + K A ++A + ASK+G T S+N L + +R + K E
Sbjct: 116 LHEKKVIDDNQYKDAMATVEAHEQASKSGDTSTSGAISKNDILKRIEEDRERHKRMRENI 175
Query: 313 KKIS---LSIRIKPLTIEGLS---VDKLRQKAQELWECI 411
IS L I T +G++ ++ L+ + ++ EC+
Sbjct: 176 WAISEPELEAEIAWNTTQGITESDLESLKDEYEKFNECL 214
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 27.5 bits (58), Expect = 0.86
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 142 KRQRLEEAEKKRQAMLQAMKDAS---KTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 312
K + +++R A +QA+ D S +T + + +SEN GL N ++ +QLE+E
Sbjct: 232 KDHEILRLKEERTAAMQAIDDISGTIETIKSDCYKVESENKGLINEVMDMRNFVQQLEQE 291
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 1.1
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 220 PNFTIQKKSENFGLSNAQLERNKTKEQLEE-EKKISLSIRIKPLTIEGL 363
P FTI++K +NF ++N ERN ++L + ++ + ++ I+ L
Sbjct: 490 PGFTIEQKDKNFSINN---ERNNFLQKLSTLDSSLAALVNVQRKLIKAL 535
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.2 bits (55), Expect = 2.0
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -1
Query: 406 TPRVPGPSVGVCRRRDPRWSAA*CGWTGRSSSPLPAAPWSC 284
TP VP S P S + TG SSSPLP+ SC
Sbjct: 302 TPTVPPTSTSSTSTPPPPASTS---STGTSSSPLPSTSTSC 339
Score = 24.6 bits (51), Expect = 6.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 328 TGRSSSPLPAAPWSC 284
TG SSSPLP+ SC
Sbjct: 101 TGSSSSPLPSTSTSC 115
>SPAC22F3.11c |snu23||U4/U6 x U5 tri-snRNP complex subunit
Snu23|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 25.8 bits (54), Expect = 2.6
Identities = 15/69 (21%), Positives = 36/69 (52%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 312
I EKR LEE +++ + + + + K ++++++ E + + +LE K + + ++
Sbjct: 65 IIEKRATLEEVKERMEYWRRQLLEPEKGSEEYSLKERVERY---HQELEAKKLRRKQKKV 121
Query: 313 KKISLSIRI 339
K S R+
Sbjct: 122 NKEKNSPRL 130
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 25.8 bits (54), Expect = 2.6
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTK--EQLEE 309
EEK +++EE E + + ++D K+ +++K S A+ +R+ + E LE+
Sbjct: 132 EEKDRKIEEGELTSEEEKEPIQDLRKSHKRKSVEKSSVPNKKHKAERKRSPSPKIEILED 191
Query: 310 EKKI 321
+++I
Sbjct: 192 DEEI 195
>SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 543
Score = 25.4 bits (53), Expect = 3.5
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -3
Query: 248 SLFFWMVKLGPVLLASFMAWSIAW 177
SL+FW L P +F++W + +
Sbjct: 111 SLYFWTAYLSPPKYRAFLSWFLGY 134
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 25.4 bits (53), Expect = 3.5
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 271 QLERNKTKEQLEEEKKISLSIRI---KPLTIEGLSVDKLRQKAQE 396
+L+R K ++Q E+EKK+ +I K +E L +++R + Q+
Sbjct: 97 RLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQQ 141
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.4 bits (53), Expect = 3.5
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 277 ERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQ-ELWE 405
E N +EQ++E+KK+S S + +++ L D L +K + E++E
Sbjct: 491 ELNNLREQIKEQKKVSESTQ---SSLQSLQRDILNEKKKHEVYE 531
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.0 bits (52), Expect = 4.6
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
+E+ ++LEE + + L+ ++ + KT QKK+ L E + KE E +K
Sbjct: 608 QEEMRKLEEKIESTKYGLETIQTSGKTIKQRIEQKKTRLMILREELQELDAIKE--EAQK 665
Query: 316 KISLSI 333
+IS S+
Sbjct: 666 QISQSL 671
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 24.6 bits (51), Expect = 6.1
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER---NKTKEQLEE 309
E RQ+ EE ++++QAM +A + A+ T ++ SE LS + +R K K++LE
Sbjct: 55 ELRQKYEEEQRRQQAM-EAKRIAAST------RQTSERPPLSAEEAKRIREVKEKDRLES 107
Query: 310 EK 315
+K
Sbjct: 108 KK 109
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 24.6 bits (51), Expect = 6.1
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 235 QKKSENFGLSNAQLERNKTKEQLEEEKKISLSIR 336
++K + Q E N K QLEEE++ +L IR
Sbjct: 1735 REKKDQLLFQRYQKELNGFKVQLEEEREKNLRIR 1768
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 24.2 bits (50), Expect = 8.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 271 QLERNKTKEQLEEEKKISLSIRIKPL 348
QL R +TK+ L +ISL IK L
Sbjct: 242 QLNRRRTKDNLTNNPEISLDEPIKAL 267
>SPBP8B7.13 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 24.2 bits (50), Expect = 8.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 268 AQLERNKTKEQLEEEKKISL 327
A LE KTK+ +++KKISL
Sbjct: 32 ASLETLKTKKNAQKKKKISL 51
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 24.2 bits (50), Expect = 8.0
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 232 IQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRI-KPLTIEGLSVDKLRQKAQEL 399
++K+ NA++E+ + +EEE++ I I + E + KL ++ +E+
Sbjct: 25 LEKEHLRMTQQNAEIEKEDEEYNIEEEEEAERDIEISSESSDEEAELKKLEEEGEEV 81
>SPBC577.05c |rec27|mug41|meiotic recombination protein
Rec27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 134
Score = 24.2 bits (50), Expect = 8.0
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 166 EKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 312
E +++A ++ + + F IQK ++ L+ +L K+QLE E
Sbjct: 58 ENEKKAFIKDVSQVQQKIKEFEIQKANQIKQLNEEKLSIEARKQQLEIE 106
>SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 24.2 bits (50), Expect = 8.0
Identities = 9/30 (30%), Positives = 21/30 (70%)
Frame = +1
Query: 304 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQ 393
EE + ++ + I PLT+E +++++ R+K +
Sbjct: 316 EEIRVLAKAFGIHPLTVEDITLEEDREKVE 345
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 24.2 bits (50), Expect = 8.0
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 268 AQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQEL 399
A L +N+ +L EE++ R+K + ++++L QK +EL
Sbjct: 348 ASLLQNEEFHKLIEERQRQHEERLKRINANKKALEELNQKKREL 391
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.308 0.125 0.319
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,077,982
Number of Sequences: 5004
Number of extensions: 13259
Number of successful extensions: 88
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 142254980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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