Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31487
(412 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0155 - 32031370-32031707,32033066-32033279 34 0.051
02_05_0232 + 27041793-27042087,27042822-27042943,27043098-270432... 33 0.12
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 32 0.21
05_04_0158 + 18613265-18615304 30 0.83
02_03_0357 + 18075171-18077240 29 1.4
11_06_0722 - 26678873-26680843 28 2.5
09_06_0200 + 21539963-21541271,21541912-21542013,21542095-215422... 28 3.3
07_03_0786 + 21510477-21511451,21512272-21512499 27 4.4
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991... 27 5.8
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768... 27 5.8
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 27 5.8
07_03_1239 + 25077597-25077684,25077779-25078419 27 7.7
07_03_0779 - 21464249-21464257,21465400-21466374 27 7.7
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 27 7.7
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 27 7.7
>03_06_0155 - 32031370-32031707,32033066-32033279
Length = 183
Score = 33.9 bits (74), Expect = 0.051
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 312
IEE +QR EEA + +Q + +A K + + + G+ + R K+ E L E+
Sbjct: 98 IEELKQREEEATQAQQQADVKLLEAKKLASQYQKEADKCSSGMDTCEEAREKSSEALVEQ 157
Query: 313 KKIS 324
+K++
Sbjct: 158 RKLT 161
>02_05_0232 + 27041793-27042087,27042822-27042943,27043098-27043219,
27043601-27043705,27043828-27044257,27044356-27044517,
27044565-27045260,27045349-27046128,27046441-27046654,
27047621-27047981,27047993-27048140,27048276-27048419,
27048784-27048888,27049749-27049794,27050089-27050255,
27050338-27050490,27050654-27050950,27051053-27051220,
27051298-27051363,27051451-27051927,27052031-27052768,
27052935-27053120
Length = 1993
Score = 32.7 bits (71), Expect = 0.12
Identities = 19/79 (24%), Positives = 38/79 (48%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 318
E+ ++ ++ + AMLQ +KD N +Q+K ++ ++E +TK Q +E
Sbjct: 1431 EEAKKFQKIKMDLLAMLQRVKDVENLNRNEKMQRKDMEEKIARQRMEIEETKRQRDELYH 1490
Query: 319 ISLSIRIKPLTIEGLSVDK 375
++ + L +E L K
Sbjct: 1491 ELKDVKEQKLCLERLDSSK 1509
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 31.9 bits (69), Expect = 0.21
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
+I E+R+R + ++ A+L+AMK+ N ++ E N +LE K+QL+E
Sbjct: 41 EIAEERERFQLEQRGNDALLEAMKE-ELVAANNELEAAKEEISRKNNELE--SVKKQLQE 97
Query: 310 EK 315
+
Sbjct: 98 SE 99
>05_04_0158 + 18613265-18615304
Length = 679
Score = 29.9 bits (64), Expect = 0.83
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAML-----QAMKDASKTGPNFTIQKK----SENFGLSNAQLERNK 288
+EK ++ +E E K Q L +AMK KTG N I+KK +E +A++ ++K
Sbjct: 608 QEKVEKNQEKEMKIQEKLGEIFDKAMKSEEKTGQNPGIEKKIQDTAEKKQEHDARVVQDK 667
Query: 289 TKEQLEEEKKI 321
++ +E KKI
Sbjct: 668 VEKIQDEAKKI 678
>02_03_0357 + 18075171-18077240
Length = 689
Score = 29.1 bits (62), Expect = 1.4
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Frame = +1
Query: 229 TIQKKSENFGLSNAQLERNKT-----KEQLEEEKKISLSIRIKP 345
+I++K +NF L+ ++ RN+T QL EE KIS+S + P
Sbjct: 594 SIKEKFKNFNLAFEEIYRNQTTWKVPDPQLREELKISISENVIP 637
>11_06_0722 - 26678873-26680843
Length = 656
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 283 NKTKEQLEEEKKISLSIRIKPLTIEGLSVDK 375
NKTK+ +E+K++ LS+ +K IE L ++
Sbjct: 418 NKTKKGRKEDKRVRLSMDVKKTVIETLKKNR 448
>09_06_0200 +
21539963-21541271,21541912-21542013,21542095-21542291,
21542396-21542603,21542685-21542922,21543010-21543160,
21543538-21543849
Length = 838
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -1
Query: 355 RWSAA*CGWTGRSSSPLPAAPWSCCAPAGHC 263
RWS+ W P P+ C P G+C
Sbjct: 272 RWSSGSSAWVVLQEWPAGCDPYDFCGPNGYC 302
>07_03_0786 + 21510477-21511451,21512272-21512499
Length = 400
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = -1
Query: 391 GPSVGVCRRRDPRWSAA*CGWTGRSSSPLPAAPWSCCAPAGH 266
GP GV R RW A GWT S SP C AP H
Sbjct: 68 GPYSGVSDGRILRWDGADEGWTTYSHSPGYNVA-KCMAPKLH 108
>12_01_0979 -
9914779-9915327,9915409-9915536,9915947-9916050,
9919832-9919946,9921036-9921528
Length = 462
Score = 27.1 bits (57), Expect = 5.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 337 CGWTGRSSSPLPAAPWSC 284
CGW GR++ P AP C
Sbjct: 39 CGWVGRAAPPTRRAPGVC 56
>10_04_0022 +
7687383-7687670,7688479-7688556,7689456-7689535,
7689876-7690095,7690444-7690677
Length = 299
Score = 27.1 bits (57), Expect = 5.8
Identities = 18/65 (27%), Positives = 36/65 (55%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 312
+EE R+++EEA++K +A+ Q K+ + IQK+ E+ + R K +E+ +
Sbjct: 236 LEENRRKVEEAQRK-EALEQQQKELERFLELERIQKQRED------AMRRKKIEEEEDRA 288
Query: 313 KKISL 327
++ L
Sbjct: 289 NQMKL 293
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 27.1 bits (57), Expect = 5.8
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
E+KR+ EEAE K+Q Q ++A K QK+ E A+ + + K+Q E EK
Sbjct: 369 EQKRREKEEAEMKKQQRKQE-EEAQKE------QKRREK---EEAETRKQQKKQQEEAEK 418
Query: 316 K 318
+
Sbjct: 419 E 419
>07_03_1239 + 25077597-25077684,25077779-25078419
Length = 242
Score = 26.6 bits (56), Expect = 7.7
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 321 LPVHPHQAADHRGSLRRQTPTEGPGTLGV 407
LP+ H AA R RR P GPG GV
Sbjct: 137 LPMTIHPAARRRRVPRRPRPQLGPGARGV 165
>07_03_0779 - 21464249-21464257,21465400-21466374
Length = 327
Score = 26.6 bits (56), Expect = 7.7
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -1
Query: 391 GPSVGVCRRRDPRWSAA*CGWTGRSSSPLPAAPWSCCAPAGH 266
GP GV R RW A GWT S +P C AP H
Sbjct: 68 GPYSGVSDGRILRWDGADKGWTTYSHAPGYNVA-KCMAPKLH 108
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 26.6 bits (56), Expect = 7.7
Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE- 309
+ E +L AEKK + Q +KDA++ + ++ + L + +R + L E
Sbjct: 820 LTEFESKLASAEKKSMDLEQELKDATEECNSSRLRVDELSGELEEYKEKRTSLEASLLEA 879
Query: 310 -EKKISLSIRIKPLTIEGLSVDKLRQKA 390
+K+ LS ++ + E ++L +KA
Sbjct: 880 KQKEAELSEKLDQVNEEKEKFEELSKKA 907
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 26.6 bits (56), Expect = 7.7
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
+ E K ++LEE EKK + + K G +QK E+ + + +R QLE
Sbjct: 295 EAESKNRKLEEREKKIAEREEKVSAREKVG----LQKLLEDHNV-KLESKRRDFDLQLEN 349
Query: 310 EKK 318
EKK
Sbjct: 350 EKK 352
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.308 0.125 0.319
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,752,811
Number of Sequences: 37544
Number of extensions: 109235
Number of successful extensions: 428
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 730630428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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