Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31487
(412 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 49 2e-06
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 48 3e-06
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 48 3e-06
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 48 3e-06
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 48 3e-06
AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical ... 36 0.011
Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical pr... 32 0.19
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.19
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 31 0.25
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 31 0.25
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 0.25
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 31 0.25
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 31 0.25
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.33
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.33
Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical pr... 31 0.43
Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical p... 31 0.43
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 30 0.57
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 30 0.57
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 30 0.57
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 30 0.57
AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical ... 30 0.57
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 30 0.75
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 30 0.75
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 30 0.75
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 29 0.99
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 0.99
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 0.99
AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical ... 29 0.99
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 1.3
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 29 1.3
AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical ... 29 1.3
U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 1.7
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 28 2.3
Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical pr... 28 2.3
AL117195-7|CAB55028.1| 158|Caenorhabditis elegans Hypothetical ... 28 2.3
AL023838-7|CAE47473.1| 357|Caenorhabditis elegans Hypothetical ... 28 2.3
AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical ... 28 2.3
AF061201-1|AAD10194.1| 357|Caenorhabditis elegans RAD51 short i... 28 2.3
AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical ... 28 2.3
AB011382-1|BAA24982.1| 357|Caenorhabditis elegans RecA/Rad51/Dm... 28 2.3
Z71178-8|CAA94882.1| 552|Caenorhabditis elegans Hypothetical pr... 28 3.0
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 28 3.0
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 27 4.0
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 27 4.0
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 27 4.0
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 27 4.0
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 27 4.0
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 27 4.0
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 27 4.0
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 27 4.0
U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence ... 27 4.0
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical pr... 27 5.3
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical p... 27 7.0
Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z78413-9|CAB01662.1| 305|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z77136-1|CAB00880.1| 606|Caenorhabditis elegans Hypothetical pr... 27 7.0
U58746-4|AAB00624.1| 751|Caenorhabditis elegans Phospholipase c... 27 7.0
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 27 7.0
Z93374-9|CAC70078.1| 116|Caenorhabditis elegans Hypothetical pr... 26 9.2
Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical pr... 26 9.2
AF273796-1|AAG15144.1| 116|Caenorhabditis elegans nuclear recep... 26 9.2
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 48.8 bits (111), Expect = 2e-06
Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Frame = +1
Query: 1 LKRLKEKQAKRKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQ 180
LK+LKEKQ KRK+ +++R R EE KK Q
Sbjct: 90 LKKLKEKQEKRKLEREQEEKEMEERRRAADDRRRQEEEERKAKVDQDRRNREEEKNKKNQ 149
Query: 181 AMLQAMKDASKTGPNFTIQKK---SENFG-LSNAQLERNKTKEQLEEEKKISLSIRIKP 345
L + + G NFT+ KK ++ FG + A+ E TKEQ E+ K+ LS R KP
Sbjct: 150 --LSGFQTGGQGGRNFTVAKKAAQNDKFGNIVQAKQEMGMTKEQQEDAKRTRLSSR-KP 205
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 48.0 bits (109), Expect = 3e-06
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Frame = +1
Query: 1 LKRLKEKQAKRKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQ 180
LK+LKEKQ KRK+ +++R R EE KK Q
Sbjct: 924 LKKLKEKQEKRKLEREQEEKEMEERRRAADDRRRQEEEERKAKVDQDRRNREEEKNKKNQ 983
Query: 181 AMLQAMKDASKTGPNFTIQKK---SENFG-LSNAQLERNKTKEQLEEEKKISL-SIRIKP 345
L + + G NFT+ KK ++ FG + A+ E TKEQ E+ K+ L +IR +
Sbjct: 984 --LSGFQTGGQGGRNFTVAKKAAQNDKFGNIVQAKQEMGMTKEQQEDAKRAFLAAIRKEI 1041
Query: 346 LTIEGLSVDKLRQKAQELWECI 411
+ +L+ K +EL + I
Sbjct: 1042 PNASEVPQSELKAKIKELHQRI 1063
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 48.0 bits (109), Expect = 3e-06
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Frame = +1
Query: 1 LKRLKEKQAKRKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQ 180
LK+LKEKQ KRK+ +++R R EE KK Q
Sbjct: 90 LKKLKEKQEKRKLEREQEEKEMEERRRAADDRRRQEEEERKAKVDQDRRNREEEKNKKNQ 149
Query: 181 AMLQAMKDASKTGPNFTIQKK---SENFG-LSNAQLERNKTKEQLEEEKKISL-SIRIKP 345
L + + G NFT+ KK ++ FG + A+ E TKEQ E+ K+ L +IR +
Sbjct: 150 --LSGFQTGGQGGRNFTVAKKAAQNDKFGNIVQAKQEMGMTKEQQEDAKRAFLAAIRKEI 207
Query: 346 LTIEGLSVDKLRQKAQELWECI 411
+ +L+ K +EL + I
Sbjct: 208 PNASEVPQSELKAKIKELHQRI 229
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 48.0 bits (109), Expect = 3e-06
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Frame = +1
Query: 1 LKRLKEKQAKRKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQ 180
L++LKEKQA+RK++ EEK+++ EE KK Q
Sbjct: 84 LEKLKEKQAQRKLAREQEEREAAERKRLDEERRQKEEQERRARAEEEKKRKEEEKLKKAQ 143
Query: 181 AMLQAMKDASKTGPNFTIQKKSENFGLSN-------AQLERNKTKEQLEEEKKISLS-IR 336
M+ + G NF IQKK E+ G+ + A+ E TKEQ EE K ++++ IR
Sbjct: 144 -MMGGGFPGQQGGRNFVIQKKEESAGVGDRFGNIVQAKQEMGMTKEQQEEAKSVAMAGIR 202
Query: 337 IKPLTIEGLSVDKLRQKAQELWECI 411
+ + ++ K +EL + I
Sbjct: 203 KSIAEASTILPNDMKAKIKELHQRI 227
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 48.0 bits (109), Expect = 3e-06
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Frame = +1
Query: 1 LKRLKEKQAKRKVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAEKKRQ 180
L++LKEKQA+RK++ EEK+++ EE KK Q
Sbjct: 84 LEKLKEKQAQRKLAREQEEREAAERKRLDEERRQKEEQERRARAEEEKKRKEEEKLKKAQ 143
Query: 181 AMLQAMKDASKTGPNFTIQKKSENFGLSN-------AQLERNKTKEQLEEEKKISLS-IR 336
M+ + G NF IQKK E+ G+ + A+ E TKEQ EE K ++++ IR
Sbjct: 144 -MMGGGFPGQQGGRNFVIQKKEESAGVGDRFGNIVQAKQEMGMTKEQQEEAKSVAMAGIR 202
Query: 337 IKPLTIEGLSVDKLRQKAQELWECI 411
+ + ++ K +EL + I
Sbjct: 203 KSIAEASTILPNDMKAKIKELHQRI 227
>AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical
protein Y92H12A.4 protein.
Length = 782
Score = 35.9 bits (79), Expect = 0.011
Identities = 23/90 (25%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
I K++ +E + + + A+ + T P+F+ +K S + + ++E+ K K+ +EE
Sbjct: 497 IRPKKKSTDEEKAIKSSSEPALSEQKSTEKPSFSTEKLSSD--SATTKIEKEKLKKAIEE 554
Query: 310 EKKISLSIRIKPLTIE-GLSVDKLRQKAQE 396
+++ L++ IK L E G + KL+ + +E
Sbjct: 555 QEEQELNVLIKQLQGEIGTKIAKLKDQWKE 584
>Z81115-5|CAB03295.1| 482|Caenorhabditis elegans Hypothetical
protein T05D4.5 protein.
Length = 482
Score = 31.9 bits (69), Expect = 0.19
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER-NKTKEQLE 306
D EEK+++ E +KK+ A + KDA +K ++ G + + K K+ E
Sbjct: 411 DAEEKKKKDAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDAE 470
Query: 307 EEKKIS 324
E+KK++
Sbjct: 471 EKKKVA 476
Score = 31.1 bits (67), Expect = 0.33
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
D EEK+++ E EKK+ A + KDA +K + + + + K+ EE
Sbjct: 419 DAEEKKKKDAEDEKKKDAGDEKKKDAEDEKKKDAGDEKKKKDAGEKKKKDAEEKKKVAEE 478
Query: 310 EKK 318
EKK
Sbjct: 479 EKK 481
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.19
Identities = 17/93 (18%), Positives = 45/93 (48%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
++E ++++ E E++++ + K+ K QK+ E + E+ + +E +
Sbjct: 221 ELEREKEKSREKEREKEREKEREKEREKEREK---QKEREKEREKEREKEKKREEEARRK 277
Query: 310 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWEC 408
+++ S + I+PL + + ++E+W C
Sbjct: 278 KEEASTPVIIRPLLSQEDDDSNGSESSEEIWIC 310
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 31.5 bits (68), Expect = 0.25
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 306
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 648 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 702
Query: 307 EEKKISLSIRIKPLTIEGLSVDKLRQK 387
+ +K+S I K +E L + +R K
Sbjct: 703 QVEKVSNEISEKQQEVENLMAE-MRDK 728
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.25
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 306
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 650 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 704
Query: 307 EEKKISLSIRIKPLTIEGLSVDKLRQK 387
+ +K+S I K +E L + +R K
Sbjct: 705 QVEKVSNEISEKQQEVENLMAE-MRDK 730
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 31.5 bits (68), Expect = 0.25
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 312
+E+K++ +EE EKKR + + A IQ K + Q R++ KE L++
Sbjct: 869 LEDKQKIVEELEKKRDEL--GEEAAKVKARQAEIQSKLDGIFKELVQCHRDEAKESLQKR 926
Query: 313 KKISLSI 333
+K+ I
Sbjct: 927 QKLEKDI 933
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 31.5 bits (68), Expect = 0.25
Identities = 21/82 (25%), Positives = 41/82 (50%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 318
E+R++LEE+E RQA L +++ E L +LE K + + +++
Sbjct: 337 ERRRKLEESETARQAELDRQATIYAEQERMAMERNRE---LERIRLEEKKRENERVRQEE 393
Query: 319 ISLSIRIKPLTIEGLSVDKLRQ 384
I++ I K +E L +++ R+
Sbjct: 394 IAMEIS-KIRELERLQLERQRK 414
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 31.5 bits (68), Expect = 0.25
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQ-KKSENFGLSNAQLERNKTKEQLE- 306
IE+ Q+LEEAEK+ + + +AS + + T+ K+SE L E N E+L+
Sbjct: 650 IEDAVQKLEEAEKRAREL-----EASVSSRDTTVSTKESELSELKGKLTESNSFIEELKV 704
Query: 307 EEKKISLSIRIKPLTIEGLSVDKLRQK 387
+ +K+S I K +E L + +R K
Sbjct: 705 QVEKVSNEISEKQQEVENLMAE-MRDK 730
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 0.33
Identities = 20/90 (22%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKD---ASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
+K +E A+K+++ Q D ASK ++ + ++ A+++ K +++LEE
Sbjct: 13495 KKAAEVEAAKKQKEKDEQLKLDTEAASKKAAAEKLELEKQSHIKKAAEVDAVKKQKELEE 13554
Query: 310 EKKISLSIRIKPLTIEGLSVDKLRQKAQEL 399
++++ K E L +++ ++KA E+
Sbjct: 13555 KQRLESEAATKKADAEKLKLEEQKKKAAEI 13584
Score = 27.9 bits (59), Expect = 3.0
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 142 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
K+Q +A+K L+A A K +I K + FG E + T EQ EEK
Sbjct: 11626 KKQDENDAKKSVSKNLKA--GAKKDSDTLSITSKKDKFGKRQDSREASATVEQQGEEK 11681
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 0.33
Identities = 20/90 (22%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKD---ASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
+K +E A+K+++ Q D ASK ++ + ++ A+++ K +++LEE
Sbjct: 13495 KKAAEVEAAKKQKEKDEQLKLDTEAASKKAAAEKLELEKQSHIKKAAEVDAVKKQKELEE 13554
Query: 310 EKKISLSIRIKPLTIEGLSVDKLRQKAQEL 399
++++ K E L +++ ++KA E+
Sbjct: 13555 KQRLESEAATKKADAEKLKLEEQKKKAAEI 13584
Score = 27.9 bits (59), Expect = 3.0
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +1
Query: 142 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
K+Q +A+K L+A A K +I K + FG E + T EQ EEK
Sbjct: 11626 KKQDENDAKKSVSKNLKA--GAKKDSDTLSITSKKDKFGKRQDSREASATVEQQGEEK 11681
>Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 30.7 bits (66), Expect = 0.43
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLER--NKTKEQLEE 309
E+++R++ E K+ + K A+ G P+ + + AQ+E N+TK+ +E
Sbjct: 536 ERQERIDRGEDKKLRQTLSDKFATSLGLPSKSSTHNPRHVLDMKAQVESVDNQTKKLSDE 595
Query: 310 EKKISLS--IRIKPLTIEG-----LSVDKLRQKA 390
E+KI+++ +R L +EG + VD+LR+ +
Sbjct: 596 ERKIAVAKKLRTMLLRLEGALNILMEVDELRRSS 629
>Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 30.7 bits (66), Expect = 0.43
Identities = 26/94 (27%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKDASKTG-PNFTIQKKSENFGLSNAQLER--NKTKEQLEE 309
E+++R++ E K+ + K A+ G P+ + + AQ+E N+TK+ +E
Sbjct: 536 ERQERIDRGEDKKLRQTLSDKFATSLGLPSKSSTHNPRHVLDMKAQVESVDNQTKKLSDE 595
Query: 310 EKKISLS--IRIKPLTIEG-----LSVDKLRQKA 390
E+KI+++ +R L +EG + VD+LR+ +
Sbjct: 596 ERKIAVAKKLRTMLLRLEGALNILMEVDELRRSS 629
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 30.3 bits (65), Expect = 0.57
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
EE+ R++E E+K++ +L+ ++A K + K+E E K K++LEEE+
Sbjct: 531 EEEEARIKEEEEKQRKILE--EEARKKQEEEEARLKAEE---ELKIYEEEKRKKELEEER 585
Query: 316 KISLSIRIK 342
K + IK
Sbjct: 586 KKKEELEIK 594
Score = 30.3 bits (65), Expect = 0.57
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 142 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 318
K+Q EEA K + L+ ++ + +KK E + + E K K+ LEEEKK
Sbjct: 554 KKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKR-KAEEEKKKKALEEEKK 611
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
E++R+ LEE +K+Q +A A + + +K+ + + E + K + EEEK
Sbjct: 542 EKQRKILEEEARKKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKRKAEEEK 601
Query: 316 K 318
K
Sbjct: 602 K 602
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.3 bits (65), Expect = 0.57
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 312
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 239 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 298
Query: 313 K-KISLSIRIKPLTIEGLSVDKLRQKAQ 393
K K + + +E L L+++A+
Sbjct: 299 KSKFDAEVALHHEEVEDLRKKMLQKQAE 326
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 30.3 bits (65), Expect = 0.57
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 312
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 239 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 298
Query: 313 K-KISLSIRIKPLTIEGLSVDKLRQKAQ 393
K K + + +E L L+++A+
Sbjct: 299 KSKFDAEVALHHEEVEDLRKKMLQKQAE 326
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 30.3 bits (65), Expect = 0.57
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 312
+EE R+RLE+AE++R + + + E+ S+A+ + N ++ +
Sbjct: 255 LEEARRRLEDAERERSQLQSQLHQVQLELDSVRTALDEESIARSDAEHKLNLANTEITQW 314
Query: 313 K-KISLSIRIKPLTIEGLSVDKLRQKAQ 393
K K + + +E L L+++A+
Sbjct: 315 KSKFDAEVALHHEEVEDLRKKMLQKQAE 342
>AL021175-9|CAA15969.2| 444|Caenorhabditis elegans Hypothetical
protein Y6E2A.8 protein.
Length = 444
Score = 30.3 bits (65), Expect = 0.57
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Frame = +1
Query: 142 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKS---ENFGLSNAQLERNKT--KEQLE 306
KR+ ++ AEK ++A L+ K++SK+ +KK ++ ++A+ K+ KEQ +
Sbjct: 323 KRETMKRAEKMKEAELKKKKESSKSKEEDKNKKKEVKIKSAPKTSAKKSAKKSAKKEQKK 382
Query: 307 EEKKI 321
EKK+
Sbjct: 383 SEKKV 387
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 29.9 bits (64), Expect = 0.75
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEE 312
+K + L E + Q ++A+ A + + IQ+ N +A+LER +E++ EE
Sbjct: 373 KKAESLPSVEAELQQRMEALTAAEQKSVSAEERIQRLDRNIQELSAELERAVQRERMNEE 432
Query: 313 KKISLSIRIKPLTIEGLSVDKLRQKAQELWECI 411
LS + L E S D+L+ +E + +
Sbjct: 433 HSQRLSSTVDKLLSE--SNDRLQLHLKERMQAL 463
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 29.9 bits (64), Expect = 0.75
Identities = 18/87 (20%), Positives = 43/87 (49%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
+ +Q+LEE EK+ Q +L+ ++ + Q + +L+R + +Q +E+
Sbjct: 203 QRHKQQLEEYEKRNQEILRREEEIKQQNQEREKQINDDFEKRKQEKLQREEEMKQQNQER 262
Query: 316 KISLSIRIKPLTIEGLSVDKLRQKAQE 396
+ ++ + +E L +KL +K ++
Sbjct: 263 EKLIADDFEKRKLEKLQREKLFEKNKQ 289
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 29.9 bits (64), Expect = 0.75
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--IQKKSENFGLSNAQLERNKTKEQLEEE 312
+K + L E + Q ++A+ A + + IQ+ N +A+LER +E++ EE
Sbjct: 373 KKAESLPSVEAELQQRMEALTAAEQKSVSAEERIQRLDRNIQELSAELERAVQRERMNEE 432
Query: 313 KKISLSIRIKPLTIEGLSVDKLRQKAQELWECI 411
LS + L E S D+L+ +E + +
Sbjct: 433 HSQRLSSTVDKLLSE--SNDRLQLHLKERMQAL 463
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 29.5 bits (63), Expect = 0.99
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDAS------KTGPNFTIQKKSENFGLSNAQLERNKTKE 297
EEK Q++ E E+K Q +L K+ + + + I++K E N Q R K E
Sbjct: 208 EEKLQQIREKERKLQELLLRQKEEAEEEALRRLANDSEIEQKLEKIRYENEQQARQKDNE 267
Query: 298 Q 300
Q
Sbjct: 268 Q 268
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 0.99
Identities = 13/62 (20%), Positives = 36/62 (58%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
D+E +++LEE+E ++ +LQ+ K + + +++ ++ +++ + K + Q+ E
Sbjct: 1397 DVEHLQKQLEESEVAKERILQSKKKIQQELEDSSMELENVRASHRDSEKRQKKFESQMAE 1456
Query: 310 EK 315
E+
Sbjct: 1457 ER 1458
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 29.5 bits (63), Expect = 0.99
Identities = 17/87 (19%), Positives = 43/87 (49%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
++KR+++EE EK+R + +++ +K+ + +L++ +++ +EEK
Sbjct: 94 KQKREKMEEREKQRIERERILEEKRLEKDKLAEEKRLDKEKKEKERLDKKLEEDKKKEEK 153
Query: 316 KISLSIRIKPLTIEGLSVDKLRQKAQE 396
+ + K E + D+ R K ++
Sbjct: 154 RKEAEEKKKKDEEEKMKKDEERNKRKK 180
>AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical
protein F57B10.6 protein.
Length = 829
Score = 29.5 bits (63), Expect = 0.99
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Frame = +1
Query: 142 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENF------GLSNAQLERNKTKEQL 303
KRQ LE +KRQ +K++ K G + KKS+ GL + L N KE +
Sbjct: 81 KRQVLEARRQKRQNDDDILKNSKKMG-KLKVLKKSQKIREIASGGLDDVAL-ANAIKEVI 138
Query: 304 EEEKKISLSIRIKPLTIEGLSVDK 375
KK+ L+ K + +DK
Sbjct: 139 SPSKKVILNDIYKDIPSTSTYLDK 162
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/68 (23%), Positives = 35/68 (51%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEE 312
+E+ +L + +Q +++ +T T +++S + +SN QLE + +E LEEE
Sbjct: 1301 LEDAEAQLCALNRIKQQQHSQLEELKRTLDQETRERQSLHSQVSNYQLECEQFRESLEEE 1360
Query: 313 KKISLSIR 336
+ ++
Sbjct: 1361 QDAKTDVQ 1368
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
E+K ++ E+ ++K + KD K+G +K+ + + + K +E+ E+EK
Sbjct: 121 EKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKKEEKKEEKKEEKKEDEK 180
Query: 316 K 318
K
Sbjct: 181 K 181
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/61 (22%), Positives = 33/61 (54%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
EEK+++ +++EKK +A K+ K +K+ + + + E K +++ +E++
Sbjct: 73 EEKKEKSKKSEKKDDKKEEAKKEDDKKDEKKDEKKEDKKDDKKDDKKEEKKEEKKEDEKE 132
Query: 316 K 318
K
Sbjct: 133 K 133
>AF025458-4|AAB70975.4| 374|Caenorhabditis elegans Hypothetical
protein C01B12.2 protein.
Length = 374
Score = 29.1 bits (62), Expect = 1.3
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKDASKTGP----NFTIQKKSENFGLSNAQLERNKTKEQLE 306
E ++R EEAE+K Q A+K +T N TIQ K+ L +E + L
Sbjct: 220 ENQKRQEEAERKLQEKQNAIKCLMETDSVTFWNQTIQSKTSTVVLDRISMELGSLAQNLI 279
Query: 307 EEKKISLSIR--IKPLTIEGLS 366
+ + S I+ L + GLS
Sbjct: 280 SGRDFAASSSKIIQVLQVLGLS 301
>U80441-1|AAB37651.1| 647|Caenorhabditis elegans Hypothetical
protein F27C1.6 protein.
Length = 647
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLER 282
D E+ ++ ++E EK + L S GP T +K+ +NF + + R
Sbjct: 514 DFEDMKEGVKEKEKVKDVDLNLAGWGSWVGPGMTEKKRRQNFVIKAKEKRR 564
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/54 (22%), Positives = 31/54 (57%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKE 297
+EK+Q+L+E EK+R+ + Q ++ ++ +E+ +++ ++ K +E
Sbjct: 216 KEKKQKLKEMEKRREKLRQKERELLAVSDKVKKEEPAESSDEEDSRKDQRKPRE 269
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 28.3 bits (60), Expect = 2.3
Identities = 20/86 (23%), Positives = 39/86 (45%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 318
E+R R+EE E+ + + ++ K ++K+E E K K LEEE +
Sbjct: 422 ERRWRIEEEERLEEIRRKKEEERKKKEEEDEKRRKAEESERVRKLKEEEKRKRVLEEEME 481
Query: 319 ISLSIRIKPLTIEGLSVDKLRQKAQE 396
+ + +E ++R+KA++
Sbjct: 482 MKRKNEEAKIKLEA----EMREKAEQ 503
>Z70208-6|CAA94138.1| 183|Caenorhabditis elegans Hypothetical
protein F54B11.6 protein.
Length = 183
Score = 28.3 bits (60), Expect = 2.3
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTI-QKKSENFGLSNAQLERNKTKEQLEE 309
++ +RQ L + R+ L A+ + K F Q++ L ++E ++TKE+LE+
Sbjct: 38 VDLQRQWLTDYHDSREKSLVALTE--KLHQEFMEDQERVRRDLLVQFKIELDQTKEELEK 95
Query: 310 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWEC 408
+ +L I+ L+ + + +K Q W+C
Sbjct: 96 KHAENLKEEIEKLSEKHQRELAVAKKKQWCWQC 128
>AL117195-7|CAB55028.1| 158|Caenorhabditis elegans Hypothetical
protein Y57A10A.9 protein.
Length = 158
Score = 28.3 bits (60), Expect = 2.3
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFT--------IQKKSENFGLSNAQLERNKTK 294
+K +RL E ++ + Q M++ASK F +QK++ENF + Q + +
Sbjct: 84 QKLRRLAAQELEQDVVEQKMREASKNKVLFANVLNIFADLQKEAENFSKTTKQSSTSPSS 143
Query: 295 EQLEEEKKISLS 330
EE S S
Sbjct: 144 SSSSEESSASSS 155
>AL023838-7|CAE47473.1| 357|Caenorhabditis elegans Hypothetical
protein Y43C5A.6b protein.
Length = 357
Score = 28.3 bits (60), Expect = 2.3
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +1
Query: 136 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 303
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 4 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 63
Query: 304 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQE 396
E ++ + R + ++G+S K + +E
Sbjct: 64 TYE-SLAFTTRRELRNVKGISDQKAEKIMKE 93
>AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical
protein Y43C5A.6a protein.
Length = 395
Score = 28.3 bits (60), Expect = 2.3
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +1
Query: 136 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 303
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 42 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 101
Query: 304 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQE 396
E ++ + R + ++G+S K + +E
Sbjct: 102 TYE-SLAFTTRRELRNVKGISDQKAEKIMKE 131
>AF061201-1|AAD10194.1| 357|Caenorhabditis elegans RAD51 short
isoform protein.
Length = 357
Score = 28.3 bits (60), Expect = 2.3
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +1
Query: 136 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 303
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 4 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 63
Query: 304 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQE 396
E ++ + R + ++G+S K + +E
Sbjct: 64 TYE-SLAFTTRRELRNVKGISDQKAEKIMKE 93
>AC024753-9|AAF60460.1| 139|Caenorhabditis elegans Hypothetical
protein Y23H5B.2 protein.
Length = 139
Score = 28.3 bits (60), Expect = 2.3
Identities = 21/78 (26%), Positives = 34/78 (43%)
Frame = +1
Query: 142 KRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKI 321
KRQ+ + +KK ++ A +K+G + KS +Q KEQ E+KK+
Sbjct: 65 KRQQNSKRQKKIKSNSAAPAPPAKSG----VPAKSAEKAKEGSQRSARLKKEQKSEKKKV 120
Query: 322 SLSIRIKPLTIEGLSVDK 375
+ +R E L K
Sbjct: 121 CVDLRSTVYIYEALLFQK 138
>AB011382-1|BAA24982.1| 357|Caenorhabditis elegans
RecA/Rad51/Dmc1-like protein protein.
Length = 357
Score = 28.3 bits (60), Expect = 2.3
Identities = 22/91 (24%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Frame = +1
Query: 136 EEKRQRLEEAEKKR--QAMLQAM--KDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQL 303
+ RQ+ + E++ QA+L A +A + NFT+ K E+ G+S+ + + K
Sbjct: 4 QASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYY 63
Query: 304 EEEKKISLSIRIKPLTIEGLSVDKLRQKAQE 396
E ++ + R + ++G+S K + +E
Sbjct: 64 TYE-SLAFTTRRELRNVKGISDQKAEKIMKE 93
>Z71178-8|CAA94882.1| 552|Caenorhabditis elegans Hypothetical
protein B0024.10 protein.
Length = 552
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 259 LSNAQLERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQELWE 405
LS+ +L + K Q E E+K +L + L E D+L + QE ++
Sbjct: 146 LSDQELATMQAKLQEENERKKALDVNFVKLKAENAERDRLERLRQEAFD 194
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 27.9 bits (59), Expect = 3.0
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = +1
Query: 139 EKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKK 318
EK++R EEA+K R+ + + Q + E + AQ E + K +LE E++
Sbjct: 325 EKKEREEEAKKNRE------RQEKERQAEVERQAELERQRIIEAQREEEEKKRRLEMERR 378
Query: 319 ISLSIRIKPLTIEGLSVDKLRQKAQE 396
+++ + +E V +++ + E
Sbjct: 379 REEDEKMRKVQMEKAKVKQMQVQMPE 404
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 27.5 bits (58), Expect = 4.0
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
E+K + ++ EKK + + +K+ K + +KK + G E + E+ +EEK
Sbjct: 95 EKKEEEKKKEEKKEEEKKEEVKEEEKKDDSKRDEKKKD--GEKKEDDENKEDNEKKKEEK 152
Query: 316 K 318
K
Sbjct: 153 K 153
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 IQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIE-GLSVDKLRQKA 390
+ K+ F L + RN+ + ++ E +K SLS +I L E + DKLR A
Sbjct: 448 LDSKNREFELLKDSIARNEIRAKMIENEKNSLSTKISDLERELKDNKDKLRHGA 501
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 IQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIRIKPLTIE-GLSVDKLRQKA 390
+ K+ F L + RN+ + ++ E +K SLS +I L E + DKLR A
Sbjct: 448 LDSKNREFELLKDSIARNEIRAKMIENEKNSLSTKISDLERELKDNKDKLRHGA 501
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 27.5 bits (58), Expect = 4.0
Identities = 20/92 (21%), Positives = 42/92 (45%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
DIEE+ +R+ E + +RQ Q +D Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 310 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWE 405
++ + L E L + +K +E W+
Sbjct: 321 RERADK----ERLQQERLLRQQREKKRREEWD 348
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 27.5 bits (58), Expect = 4.0
Identities = 20/92 (21%), Positives = 42/92 (45%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
DIEE+ +R+ E + +RQ Q +D Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 310 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWE 405
++ + L E L + +K +E W+
Sbjct: 321 RERADK----ERLQQERLLRQQREKKRREEWD 348
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 27.5 bits (58), Expect = 4.0
Identities = 20/92 (21%), Positives = 42/92 (45%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
DIEE+ +R+ E + +RQ Q +D Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 310 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWE 405
++ + L E L + +K +E W+
Sbjct: 321 RERADK----ERLQQERLLRQQREKKRREEWD 348
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 27.5 bits (58), Expect = 4.0
Identities = 20/92 (21%), Positives = 42/92 (45%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
DIEE+ +R+ E + +RQ Q +D Q++ + + + ++N ++ L E
Sbjct: 263 DIEEQERRIREDQARRQQEEQDRRDREDNARRILAQREHQE--MERLREQQNLSERALAE 320
Query: 310 EKKISLSIRIKPLTIEGLSVDKLRQKAQELWE 405
++ + L E L + +K +E W+
Sbjct: 321 RERADK----ERLQQERLLRQQREKKRREEWD 348
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 27.5 bits (58), Expect = 4.0
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 130 DIEEKRQRLEE-AEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLE 306
D++E+++R+E AEK+R A +A + NF + E ++ + KTK LE
Sbjct: 672 DVQEEKRRMEAFAEKERLASERAAVENELESFNFECSQYLEETEFTDYMADEEKTK--LE 729
Query: 307 EEKK 318
+ K
Sbjct: 730 DSVK 733
>U00066-1|AAA50742.1| 490|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 10 protein.
Length = 490
Score = 27.5 bits (58), Expect = 4.0
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQK----KSENFGLSNAQLERNKTKE 297
++E+ R+ L EAEKK+ +L A + K + I + K+E + N E + E
Sbjct: 150 EMEKIREELLEAEKKKNDLL-AKQSIRKRHEHELINEQSNAKAELKNVVNEYTETRQINE 208
Query: 298 QLEEEKKISLSIRIKPLTIEGLSVDKLRQKAQE 396
+L+++K+ ++ + I+ L E L+ K + E
Sbjct: 209 ELDKQKEEAI-LHIQALEKEMLTGKKTIEHLNE 240
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 27.1 bits (57), Expect = 5.3
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
D ++K ++ E EKK + + KD K +KKSE + +K + E+
Sbjct: 72 DGDKKSEKKEGDEKKEEKKDEDKKDEKKDEEKKDGEKKSEKKDEKKDDKKDDKKDGKKED 131
Query: 310 EKK 318
EKK
Sbjct: 132 EKK 134
>Z68879-4|CAA93085.1| 215|Caenorhabditis elegans Hypothetical
protein K08F4.5 protein.
Length = 215
Score = 27.1 bits (57), Expect = 5.3
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 136 EEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEK 315
EEK++ + EKK ++ K++ + N +KK E G + + K +E E +K
Sbjct: 95 EEKKEEERKEEKKEESKEGEKKNSGEEKKNSGDEKKEEG-GKKDDAKDGEKKEEAKEGDK 153
Query: 316 K 318
K
Sbjct: 154 K 154
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 27.1 bits (57), Expect = 5.3
Identities = 10/16 (62%), Positives = 16/16 (100%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQ 180
+EEK++RL+EA+KKR+
Sbjct: 543 LEEKKRRLQEAKKKRR 558
>Z81533-14|CAB04331.2| 707|Caenorhabditis elegans Hypothetical
protein F36G9.12 protein.
Length = 707
Score = 26.6 bits (56), Expect = 7.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 251 FSLFFWMVKLGPVLLASFMAW 189
FS FFW + + V++A+ M W
Sbjct: 567 FSRFFWAIAVSWVIVANHMGW 587
>Z78420-6|CAB01711.2| 1243|Caenorhabditis elegans Hypothetical
protein F45H11.4 protein.
Length = 1243
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 262 SNAQLERNKTKEQLEEEKKISLSIRIKPLTIEG 360
S+ +RN E LEEE + S SIRI I G
Sbjct: 296 SDGWADRNDVVEDLEEEAEGSFSIRIHAPKIPG 328
>Z78418-6|CAB01699.2| 1243|Caenorhabditis elegans Hypothetical
protein F45H11.4 protein.
Length = 1243
Score = 26.6 bits (56), Expect = 7.0
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1
Query: 262 SNAQLERNKTKEQLEEEKKISLSIRIKPLTIEG 360
S+ +RN E LEEE + S SIRI I G
Sbjct: 296 SDGWADRNDVVEDLEEEAEGSFSIRIHAPKIPG 328
>Z78413-9|CAB01662.1| 305|Caenorhabditis elegans Hypothetical
protein T01C3.9 protein.
Length = 305
Score = 26.6 bits (56), Expect = 7.0
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFG--LSNAQLERNKTKEQLE 306
IEE++QR+EE + R ++ A+ DA+ + + G +S A + K KE+++
Sbjct: 182 IEEQQQRIEEIRRTRASVPVAISDAANGSAEMVPSNTTGSSGSPMSTAPVPAAK-KEKVQ 240
Query: 307 EE 312
E
Sbjct: 241 YE 242
>Z77136-1|CAB00880.1| 606|Caenorhabditis elegans Hypothetical
protein ZC376.1 protein.
Length = 606
Score = 26.6 bits (56), Expect = 7.0
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 214 TGPNFTIQKKSENFGLSNAQLERNKTKEQLEEEKKISLSIR 336
+GP+ +I++ + F + LE K + +L+ EKKI + +R
Sbjct: 510 SGPDKSIEQFEKVFNERESFLEELKLRRKLKLEKKIGVQMR 550
>U58746-4|AAB00624.1| 751|Caenorhabditis elegans Phospholipase c
protein 4 protein.
Length = 751
Score = 26.6 bits (56), Expect = 7.0
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 277 ERNKTKEQLEEEKKISLSIRIKPLTIEGLSVDKLRQK 387
+ KTKE+LE +K SL RIK ++ +++ ++ K
Sbjct: 17 DEEKTKEELEWAEKGSLLCRIKNQKVKEMALVTIKSK 53
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 26.6 bits (56), Expect = 7.0
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
D+E+ Q+ + EK+ + + +A K + + +++ L A+ + NK K +E+
Sbjct: 3168 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 3227
Query: 310 EKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECI 411
K++ S +I P + + K KA+EL + +
Sbjct: 3228 LTKLAESSDKIDPQVAKDIKDSK--TKAKELLQAL 3260
Score = 26.6 bits (56), Expect = 7.0
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
D+E+ Q+ + EK+ + + +A K + + +++ L A+ + NK K +E+
Sbjct: 5025 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 5084
Query: 310 EKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECI 411
K++ S +I P + + K KA+EL + +
Sbjct: 5085 LTKLAESSDKIDPQVAKDIKDSK--TKAKELLQAL 5117
Score = 26.6 bits (56), Expect = 7.0
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
D+E+ Q+ + EK+ + + +A K + + +++ L A+ + NK K +E+
Sbjct: 5928 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 5987
Query: 310 EKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECI 411
K++ S +I P + + K KA+EL + +
Sbjct: 5988 LTKLAESSDKIDPQVAKDIKDSK--TKAKELLQAL 6020
Score = 26.6 bits (56), Expect = 7.0
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
D+E+ Q+ + EK+ + + +A K + + +++ L A+ + NK K +E+
Sbjct: 6831 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 6890
Query: 310 EKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECI 411
K++ S +I P + + K KA+EL + +
Sbjct: 6891 LTKLAESSDKIDPQVAKDIKDSK--TKAKELLQAL 6923
Score = 26.6 bits (56), Expect = 7.0
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +1
Query: 130 DIEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
D+E+ Q+ + EK+ + + +A K + + +++ L A+ + NK K +E+
Sbjct: 7734 DLEKNIQKTGDDEKRADELKNDVGNAVKNVEDVVSKYQNQPQPLDVAKDDANKLKATVEQ 7793
Query: 310 EKKIS-LSIRIKPLTIEGLSVDKLRQKAQELWECI 411
K++ S +I P + + K KA+EL + +
Sbjct: 7794 LTKLAESSDKIDPQVAKDIKDSK--TKAKELLQAL 7826
>Z93374-9|CAC70078.1| 116|Caenorhabditis elegans Hypothetical
protein C06C6.5b protein.
Length = 116
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENF 255
++EKR+R + K ++ +A+ +S T P+ I + N+
Sbjct: 70 VQEKRERHPPKKNKPPSISEALTSSSSTPPSLPISQLPVNY 110
>Z50027-2|CAA90335.1| 188|Caenorhabditis elegans Hypothetical
protein C39B10.3 protein.
Length = 188
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 148 QRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENFGLSNAQLERNKTKEQLEE 309
Q +EE +++ ML + DASK +K+ EN + E K L+E
Sbjct: 71 QSMEERVARQEEMLTFLVDASKKYDEELEEKRDENKKATKEYEELEKVAANLKE 124
>AF273796-1|AAG15144.1| 116|Caenorhabditis elegans nuclear receptor
NHR-50 protein.
Length = 116
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 133 IEEKRQRLEEAEKKRQAMLQAMKDASKTGPNFTIQKKSENF 255
++EKR+R + K ++ +A+ +S T P+ I + N+
Sbjct: 70 VQEKRERHPPKKNKPPSISEALTSSSSTPPSLPISQLPVNY 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.308 0.125 0.319
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,075,979
Number of Sequences: 27780
Number of extensions: 81561
Number of successful extensions: 459
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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