Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31486
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 120 1e-27
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 120 1e-27
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 110 9e-25
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 110 9e-25
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 103 2e-22
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 103 2e-22
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 99 2e-21
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 42 5e-04
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 38 0.008
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 38 0.008
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 36 0.042
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 36 0.042
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 36 0.042
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 36 0.042
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 34 0.096
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 33 0.22
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 32 0.39
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 32 0.39
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 32 0.51
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 31 0.68
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 31 0.68
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 31 0.68
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 31 0.68
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 31 0.68
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 31 0.68
Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical pr... 30 2.1
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical ... 30 2.1
AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical... 30 2.1
Z77657-5|CAB01145.2| 381|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical pr... 29 3.6
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 4.8
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 4.8
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 4.8
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 4.8
AF077539-3|AAC26291.1| 310|Caenorhabditis elegans Hypothetical ... 29 4.8
AF022982-1|AAB69937.1| 224|Caenorhabditis elegans Hypothetical ... 29 4.8
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 28 6.3
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 28 6.3
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 6.3
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 6.3
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 6.3
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 28 6.3
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 28 6.3
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 28 6.3
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical pr... 28 8.4
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 120 bits (288), Expect = 1e-27
Identities = 74/177 (41%), Positives = 95/177 (53%), Gaps = 3/177 (1%)
Frame = +1
Query: 121 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 301 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL 480
++D NED ++ V + ER+ LE E +D+ YIV++KD EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 481 RGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVKKKEFTLGR--GRQREKA 642
RGKFVKPTLKKVSK E KF KL+KK A + +FR QLKVV K EF L ++EKA
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFALDEEDTEKKEKA 190
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 120 bits (288), Expect = 1e-27
Identities = 74/177 (41%), Positives = 95/177 (53%), Gaps = 3/177 (1%)
Frame = +1
Query: 121 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
+RK+ EVRKR+EEAS GF+TP
Sbjct: 16 ERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQRIL 75
Query: 301 XXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL 480
++D NED ++ V + ER+ LE E +D+ YIV++KD EI++L VNDL
Sbjct: 76 QERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDL 133
Query: 481 RGKFVKPTLKKVSKYENKFAKLQKK-AAEFNFRNQLKVVKKKEFTLGR--GRQREKA 642
RGKFVKPTLKKVSK E KF KL+KK A + +FR QLKVV K EF L ++EKA
Sbjct: 134 RGKFVKPTLKKVSKTEGKFDKLKKKEATKVDFRAQLKVVDKNEFALDEEDTEKKEKA 190
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 110 bits (265), Expect = 9e-25
Identities = 70/192 (36%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Frame = +1
Query: 127 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 307 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLR 483
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 484 GKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLGRGRQREKA*LVEGQA 663
GKFVKPTLKKVSKY+NKF + + NFRN LKVV KKE L ++K +G+
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVV-KKETDLDEIMAKKKG-TADGKP 208
Query: 664 GRSEGKEEEVEA 699
S+ +++E EA
Sbjct: 209 EWSKKEKKEEEA 220
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 110 bits (265), Expect = 9e-25
Identities = 70/192 (36%), Positives = 98/192 (51%), Gaps = 1/192 (0%)
Frame = +1
Query: 127 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 307 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLR 483
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QVNDLR
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLR 150
Query: 484 GKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLGRGRQREKA*LVEGQA 663
GKFVKPTLKKVSKY+NKF + + NFRN LKVV KKE L ++K +G+
Sbjct: 151 GKFVKPTLKKVSKYDNKFKSSGEVKEKSNFRNNLKVV-KKETDLDEIMAKKKG-TADGKP 208
Query: 664 GRSEGKEEEVEA 699
S+ +++E EA
Sbjct: 209 EWSKKEKKEEEA 220
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 103 bits (246), Expect = 2e-22
Identities = 58/163 (35%), Positives = 84/163 (51%), Gaps = 3/163 (1%)
Frame = +1
Query: 121 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 301 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 477
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 478 LRGKFVKPTLKKVSKYENKFAKL--QKKAAEFNFRNQLKVVKK 600
LRGKFVKP+LKKVSKY+NKF K K + +FR LK+VKK
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIVKK 179
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 103 bits (246), Expect = 2e-22
Identities = 58/163 (35%), Positives = 84/163 (51%), Gaps = 3/163 (1%)
Frame = +1
Query: 121 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
+ K+AEVRKR+EEA GF+TP
Sbjct: 17 EAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQERQKAL 76
Query: 301 XXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 477
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L +VND
Sbjct: 77 ADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVND 136
Query: 478 LRGKFVKPTLKKVSKYENKFAKL--QKKAAEFNFRNQLKVVKK 600
LRGKFVKP+LKKVSKY+NKF K K + +FR LK+VKK
Sbjct: 137 LRGKFVKPSLKKVSKYDNKFKKSGESKAGTKEDFRANLKIVKK 179
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 99 bits (238), Expect = 2e-21
Identities = 65/193 (33%), Positives = 93/193 (48%), Gaps = 4/193 (2%)
Frame = +1
Query: 121 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 301 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 477
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 478 LRGKFVKPTLKKVSKYENKFAKL---QKKAAEFNFRNQLKVVKKKEFTLGRGRQREKA*L 648
LRGKFVKP+LKKVSKY+NKF K+ +K+ N RN LK V KKE + ++K+
Sbjct: 149 LRGKFVKPSLKKVSKYDNKFKKMAEAKKEDGSKNLRNNLKTV-KKESVFTQIANKKKSDK 207
Query: 649 VEGQAGRSEGKEE 687
E + E KEE
Sbjct: 208 PEWSKKKEEKKEE 220
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 99 bits (238), Expect = 2e-21
Identities = 65/193 (33%), Positives = 93/193 (48%), Gaps = 4/193 (2%)
Frame = +1
Query: 121 DRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
+ K+AEVRKR+EEA GF+TP
Sbjct: 30 EAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQERVKVL 88
Query: 301 XXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 477
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN +VND
Sbjct: 89 AERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLNIEVND 148
Query: 478 LRGKFVKPTLKKVSKYENKFAKL---QKKAAEFNFRNQLKVVKKKEFTLGRGRQREKA*L 648
LRGKFVKP+LKKVSKY+NKF K+ +K+ N RN LK V KKE + ++K+
Sbjct: 149 LRGKFVKPSLKKVSKYDNKFKKMAEAKKEDGSKNLRNNLKTV-KKESVFTQIANKKKSDK 207
Query: 649 VEGQAGRSEGKEE 687
E + E KEE
Sbjct: 208 PEWSKKKEEKKEE 220
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 41.9 bits (94), Expect = 5e-04
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Frame = +1
Query: 325 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNS---QV--NDLRGK 489
N + + +K K+ H+RI +LE EK+DLE +R++ ++ +LN QV N K
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNERQRQVTRNSALKK 1102
Query: 490 FVKPTLKKVSKYENK---FAKLQKKAAEFNFRNQLKVVKKK 603
+ P ++Y K +K ++ NFR + V K+
Sbjct: 1103 GIDPAEVGNTRYPAKVQIVSKYDRQVDRRNFRERRSVFDKR 1143
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 316 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL-RGKF 492
K +++ + +K K H RI +LE EK+DLE +R++ ++ +LN + + R K
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 184
Query: 493 VKPTL 507
+K L
Sbjct: 185 LKKGL 189
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 37.9 bits (84), Expect = 0.008
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 316 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL-RGKF 492
K +++ + +K K H RI +LE EK+DLE +R++ ++ +LN + + R K
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 288
Query: 493 VKPTL 507
+K L
Sbjct: 289 LKKGL 293
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 35.5 bits (78), Expect = 0.042
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +1
Query: 352 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNS-QVNDLRGKFVKPTLKKVSKYE 528
+K + H RI +LE EK+DLE +R+D ++ +L+ Q R K +K L
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGLDPEEAAS 291
Query: 529 NKFAKLQKKAAEFNFRNQLKVVKKKEFTLGRGRQREKA*LVEG 657
+ A++F+ + + + + + ++A LV G
Sbjct: 292 SVHPPKITTASKFDRQTDRRSYGDRRYLFENPEEEKQASLVRG 334
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 35.5 bits (78), Expect = 0.042
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +1
Query: 352 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNS-QVNDLRGKFVKPTLKKVSKYE 528
+K + H RI +LE EK+DLE +R+D ++ +L+ Q R K +K L
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGLDPEEAAS 291
Query: 529 NKFAKLQKKAAEFNFRNQLKVVKKKEFTLGRGRQREKA*LVEG 657
+ A++F+ + + + + + ++A LV G
Sbjct: 292 SVHPPKITTASKFDRQTDRRSYGDRRYLFENPEEEKQASLVRG 334
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +1
Query: 352 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 468
+K K+ H+RI +LE +K+DLE +R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +1
Query: 352 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 468
+K K+ H+RI +LE +K+DLE +R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 325 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 459
N + + +K K+ H+RI +LE EK+DLE +R++ + L
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDPKQL 253
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +1
Query: 343 EDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS- 519
ED + R+C+ Y + + R+ + + +LEY K K+ + + + + + K + L K++
Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY-EKEKNRALQETINNSSSVDSKINQEKLNKINN 729
Query: 520 -KYENKFAKLQKKAAEFNFRNQLKVVK 597
K K +L K + N +N + ++K
Sbjct: 730 DKKARKNYELNKIESIINKKN-MDIIK 755
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical
protein T10G3.5b protein.
Length = 1203
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +1
Query: 424 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 534
+++ K+ EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 435 LLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 470
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical
protein T10G3.5a protein.
Length = 1205
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +1
Query: 424 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 534
+++ K+ EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 437 LLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 472
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +1
Query: 424 IVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENK 534
+++ K+ EIS+ +S +NDL+ K + + KK +KY+N+
Sbjct: 437 LLEEKNKEISERDSSINDLKEKLAE-SEKKATKYKNE 472
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/76 (23%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 379 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 558
E I L K + E ++K+KD+E+S + S++ D V +++ + + +L+++
Sbjct: 1074 ELIEELNRHKHEQEQVIKKKDIELSSIQSRLED-EQSLVAKLQRQIKELLARIQELEEEL 1132
Query: 559 -AEFNFRNQLKVVKKK 603
AE N R++ + + +
Sbjct: 1133 DAERNSRSKAEKARNE 1148
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 31.5 bits (68), Expect = 0.68
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +1
Query: 352 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL------RGKFVKPTLKK 513
++R KD RI+ LE+E + + D SDL ++ +L +G ++
Sbjct: 1113 LQRQIKDGQSRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEV 1172
Query: 514 VSKYENKFAKLQK--KAAEFNFRNQLKVVKKK 603
K E + AKL++ + A N NQL ++KK
Sbjct: 1173 NKKREAELAKLRRDLEEANMNHENQLGGLRKK 1204
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 31.5 bits (68), Expect = 0.68
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +1
Query: 352 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL------RGKFVKPTLKK 513
++R KD RI+ LE+E + + D SDL ++ +L +G ++
Sbjct: 1113 LQRQIKDGQSRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEV 1172
Query: 514 VSKYENKFAKLQK--KAAEFNFRNQLKVVKKK 603
K E + AKL++ + A N NQL ++KK
Sbjct: 1173 NKKREAELAKLRRDLEEANMNHENQLGGLRKK 1204
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 31.5 bits (68), Expect = 0.68
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Frame = +1
Query: 391 RLEDEKFDLEYIVKRKDMEISDLNSQVNDL--RGKFVKPTLKKVSKYENKFAKLQKKAAE 564
+L+D + D++ +K +EI + +++ R K + +KK+ E + ++ E
Sbjct: 756 QLKDHQKDIDQCRHKKKLEIQSMQLSLDNANARVKESEAMMKKLQNDEKQKFDMKMSEIE 815
Query: 565 FNFRNQLKV-VKKKEFTLGRGRQREKA*LVEGQAGRSEGKEEEVEA 699
F+ +L V +KK+E T+ R E +E ++ E +E+
Sbjct: 816 NTFKEKLSVSLKKQEDTIRRQSLAENQGKLEVMENKNRVLSETIES 861
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 31.5 bits (68), Expect = 0.68
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +1
Query: 352 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL------RGKFVKPTLKK 513
++R KD RI+ LE+E + + D SDL ++ +L +G ++
Sbjct: 1116 LQRQIKDGQSRISELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEV 1175
Query: 514 VSKYENKFAKLQK--KAAEFNFRNQLKVVKKK 603
K E + AKL++ + A N NQL ++KK
Sbjct: 1176 NKKREAELAKLRRDLEEANMNHENQLGGLRKK 1207
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 31.5 bits (68), Expect = 0.68
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Frame = +1
Query: 391 RLEDEKFDLEYIVKRKDMEISDLNSQVNDL--RGKFVKPTLKKVSKYENKFAKLQKKAAE 564
+L+D + D++ +K +EI + +++ R K + +KK+ E + ++ E
Sbjct: 756 QLKDHQKDIDQCRHKKKLEIQSMQLSLDNANARVKESEAMMKKLQNDEKQKFDMKMSEIE 815
Query: 565 FNFRNQLKV-VKKKEFTLGRGRQREKA*LVEGQAGRSEGKEEEVEA 699
F+ +L V +KK+E T+ R E +E ++ E +E+
Sbjct: 816 NTFKEKLSVSLKKQEDTIRRQSLAENQGKLEVMENKNRVLSETIES 861
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 31.5 bits (68), Expect = 0.68
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Frame = +1
Query: 391 RLEDEKFDLEYIVKRKDMEISDLNSQVNDL--RGKFVKPTLKKVSKYENKFAKLQKKAAE 564
+L+D + D++ +K +EI + +++ R K + +KK+ E + ++ E
Sbjct: 754 QLKDHQKDIDQCRHKKKLEIQSMQLSLDNANARVKESEAMMKKLQNDEKQKFDMKMSEIE 813
Query: 565 FNFRNQLKV-VKKKEFTLGRGRQREKA*LVEGQAGRSEGKEEEVEA 699
F+ +L V +KK+E T+ R E +E ++ E +E+
Sbjct: 814 NTFKEKLSVSLKKQEDTIRRQSLAENQGKLEVMENKNRVLSETIES 859
>Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical
protein W01B6.3 protein.
Length = 484
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = -2
Query: 626 LPLPKVNSFFFTTFNWLRKLNSAAFFWSLANLFSYLETFF 507
+PL K + F F +F L SAA F S+A++FS L T+F
Sbjct: 178 IPLGK-DGFIFGSFV-LNMYTSAAVFMSIASIFSILLTYF 215
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 481 RGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTL 615
RGKFV+P + ++ K+ K KL+K + KV+K+KE L
Sbjct: 649 RGKFVRPLMPRIPKFVAKKKKLKKVDGK-------KVLKRKEIVL 686
>AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical
protein ZC190.5 protein.
Length = 311
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Frame = -2
Query: 596 FTTFNWLRKLNSAAFFWSLANLFSYLETFFSVGLTN--LPLRSLTWEFRSEISI---SFL 432
FT + + L+ F ++F YL + LT LRS TWEF E + S
Sbjct: 34 FTVYLLMVGLSMTLFASYGFSIFEYLNSSKYYALTPEFATLRSKTWEFIHEFGVCLQSLS 93
Query: 431 LTMYSRSNFXXXXXXXXXXXSLQTLLIVSSLASSMFLGL 315
+ ++S + + +LI S+ S++FL L
Sbjct: 94 MLLFSMERYSAIRYPDFHASTTFVVLIYVSIVSAVFLAL 132
>AF039713-10|AAB96721.1| 691|Caenorhabditis elegans Hypothetical
protein F57B10.4 protein.
Length = 691
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +1
Query: 514 VSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLGRGRQREKA*LVEGQAGRSEGKEE 687
V++++N+ + K+AAE ++ K+ KKE ++ + + + E +AG S+G EE
Sbjct: 610 VAEFDNR--QKAKRAAEQIKKSSSKISGKKEESVADDKSSGNSYVAESEAGFSQGSEE 665
>Z77657-5|CAB01145.2| 381|Caenorhabditis elegans Hypothetical
protein F08H9.8 protein.
Length = 381
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = -2
Query: 695 STSSSLPSDLPACPST---SQAFSLCLPLPKVNSFFFTTFNWLRKLNSAAFFWSLANLFS 525
ST S + +D CPS S S C + F T ++ + L F SL+ F+
Sbjct: 14 STFSDVTADNSLCPSGWSFSNETSYCYIVSDRYMPFSETSSYCQSLGGTQVFISLSYEFT 73
Query: 524 YLETFFSVGLTNLPLRSLT 468
+++T F+ GL P S+T
Sbjct: 74 FMKT-FTQGLFAQPWLSIT 91
>Z68217-1|CAA92465.1| 461|Caenorhabditis elegans Hypothetical
protein F58G6.1 protein.
Length = 461
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/80 (23%), Positives = 40/80 (50%)
Frame = +1
Query: 325 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 504
N+D + K VC D + + + ++ DL+ ++++ ++ D +S N VK +
Sbjct: 97 NLDIQTNELEKTVCDDLPQTVTQYVNQFPDLKKKIEKRGRKLVDYDSAKNSFNS--VKAS 154
Query: 505 LKKVSKYENKFAKLQKKAAE 564
KK + + A ++ +AAE
Sbjct: 155 SKKDNDPKLAKATMELQAAE 174
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 331 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 504
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 331 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 504
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 331 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 504
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 446 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 505
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 331 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 504
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>AF077539-3|AAC26291.1| 310|Caenorhabditis elegans Hypothetical
protein T25D3.2 protein.
Length = 310
Score = 28.7 bits (61), Expect = 4.8
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLE-YIVKRKDMEISDLNSQ-VNDLRGKFV 495
KN+ +E K + ER RL DE F L+ YI++ K++ DL+S+ N L+ + +
Sbjct: 138 KNVVLYSEILDKYIKVTVTERAMRLIDEHFGLDYYILESKEI---DLDSKFANSLKREML 194
Query: 496 KPTLKKVSKYE---NKFAKLQKKAAEF 567
TL S YE K A +++K A+F
Sbjct: 195 L-TLTTESYYEENDEKKAYIKEKYADF 220
>AF022982-1|AAB69937.1| 224|Caenorhabditis elegans Hypothetical
protein T23B12.5 protein.
Length = 224
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -2
Query: 497 LTNLPLRSLTWEFRSEISISFLLTMYSRSNFXXXXXXXXXXXSLQTLLIVSSLASSMFLG 318
L NLPL + W F S S+ L + R + L+ L++SS+ ++FL
Sbjct: 39 LLNLPLERIFWNFLSLSSVPLQLFVVLR-QYMLTFSTSNKLQLLRITLVISSVFQTLFLT 97
Query: 317 L 315
L
Sbjct: 98 L 98
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 349 TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 474
T KR+ + YH I L++ + Y +KRK + + + ++N
Sbjct: 200 TTKRLMEHYHIEIDNLKEAHSEEMYKIKRKYSTLEEYSEEIN 241
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.3 bits (60), Expect = 6.3
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +1
Query: 373 YHERIARLED-EKFDLEYIVKRKDMEISDLNSQV-NDLRGKFVKPTLKKVSKYENKFAKL 546
Y++ I R EK I++R ++L + V L GK VKP + K E ++ KL
Sbjct: 811 YYQTIERKRRVEKITALKIIQRNIRSWAELRTWVWFKLYGK-VKPLVNS-GKIEAQYEKL 868
Query: 547 QKKAAEFNFRNQLKVVKKKEFTLGRGRQREKA*LVEGQAGRSEGKEEEVE 696
Q+ A + KK++ G R ++ + Q S+G EVE
Sbjct: 869 QETVATLKDTVVQEEEKKRQLQEGAERLNKETADLLAQLEASKGSTREVE 918
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 28.3 bits (60), Expect = 6.3
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +1
Query: 373 YHERIARLED-EKFDLEYIVKRKDMEISDLNSQV-NDLRGKFVKPTLKKVSKYENKFAKL 546
Y++ I R EK I++R ++L + V L GK VKP + K E ++ KL
Sbjct: 811 YYQTIERKRRVEKITALKIIQRNIRSWAELRTWVWFKLYGK-VKPLVNS-GKIEAQYEKL 868
Query: 547 QKKAAEFNFRNQLKVVKKKEFTLGRGRQREKA*LVEGQAGRSEGKEEEVE 696
Q+ A + KK++ G R ++ + Q S+G EVE
Sbjct: 869 QETVATLKDTVVQEEEKKRQLQEGAERLNKETADLLAQLEASKGSTREVE 918
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 28.3 bits (60), Expect = 6.3
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +1
Query: 373 YHERIARLED-EKFDLEYIVKRKDMEISDLNSQV-NDLRGKFVKPTLKKVSKYENKFAKL 546
Y++ I R EK I++R ++L + V L GK VKP + K E ++ KL
Sbjct: 811 YYQTIERKRRVEKITALKIIQRNIRSWAELRTWVWFKLYGK-VKPLVNS-GKIEAQYEKL 868
Query: 547 QKKAAEFNFRNQLKVVKKKEFTLGRGRQREKA*LVEGQAGRSEGKEEEVE 696
Q+ A + KK++ G R ++ + Q S+G EVE
Sbjct: 869 QETVATLKDTVVQEEEKKRQLQEGAERLNKETADLLAQLEASKGSTREVE 918
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 331 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 459
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1072 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1114
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 331 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 459
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 331 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 459
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 28.3 bits (60), Expect = 6.3
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Frame = +1
Query: 346 DTIKRVCKDYHERIARLEDEKFDLEYIVK----RKDMEIS---DLNSQVNDLRGKFVKPT 504
+ I+ + K ER+ LE+EK DL+ K ++ +E + + N + + K +
Sbjct: 188 EKIQGLLKYIDERLQTLENEKEDLKEYQKLDKTKRSVEYTMYDNTNKEAIKEKTKLDEQK 247
Query: 505 LKKVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLGRGRQREK 639
++ K N ++L AE +LK KKK +LGRG + +K
Sbjct: 248 VELNQKDNNVKSQLNDVIAEMA---KLKTDKKKLESLGRGLREDK 289
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 388 ARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 549
A +EDE+ +RK E D+ ++ DLR K + T K+ K EN LQ
Sbjct: 8 AIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMT-KQFDKSENDIKSLQ 60
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 388 ARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQ 549
A +EDE+ +RK E D+ ++ DLR K + T K+ K EN LQ
Sbjct: 16 AIVEDERTKALNSYRRKLAECRDIEQKLKDLRKKESEMT-KQFDKSENDIKSLQ 68
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 436 KDMEISDLNSQV-NDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRN 579
K +IS+L+ QV +D+ KF T+K + Y K KL + +F N
Sbjct: 183 KISKISELSKQVCDDISDKFA-ATIKSLQNYFEKHEKLSPPGRKTHFNN 230
>Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical
protein R09E10.1 protein.
Length = 294
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +1
Query: 322 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 501
+N+ +KRV K + + + D K DL IVK++ E + + KF+K
Sbjct: 200 RNLQTQGPQHLKRVKKFLYGQYPKYVDMKRDLLKIVKQQKPEAQSVRDESAQAISKFIKE 259
Query: 502 TLKKVSKYENK 534
Y ++
Sbjct: 260 KYVNAKIYASR 270
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,609,830
Number of Sequences: 27780
Number of extensions: 208959
Number of successful extensions: 1020
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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