Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31485
         (611 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    24   0.88 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   0.88 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   6.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.2  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 44  KYMYYNIFFHITSLITTI 97
           K++Y NI  H++ L+T +
Sbjct: 138 KHLYVNILIHLSGLVTIV 155


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 24.2 bits (50), Expect = 0.88
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 44  KYMYYNIFFHITSLITTI 97
           K++Y NI  H++ L+T +
Sbjct: 138 KHLYVNILIHLSGLVTIV 155


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +3

Query: 387 SSFVNQIQLIHYYDNRAMDVLKILC*KQ*TIFIR*VIS*IMYLGVCFFLRDIL 545
           +  +  I  +H  DN+   +L     K+  IFI   +  ++ L + FFL  +L
Sbjct: 102 NKLIEVISKLHKLDNKLKHMLIWKSYKRTQIFITCELFFVILLWISFFLNFML 154


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -2

Query: 517 PKYIIYEMTYLIKIVYCF*HKIFKTSI 437
           P Y+ Y + ++ +I +CF  ++ +  I
Sbjct: 175 PVYVSYLLIFVQQIPFCFFVRVIRLKI 201


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 141 FLVIVNNNDAIQFNC 185
           + VI++N DA+ F+C
Sbjct: 462 YRVILSNYDALYFDC 476


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,485
Number of Sequences: 336
Number of extensions: 2795
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)