Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31482
         (340 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6GNC2 Cluster: LOC443671 protein; n=4; Xenopus|Rep: LO...    33   0.95 
UniRef50_A4BAB4 Cluster: Putative uncharacterized protein; n=1; ...    33   1.3  
UniRef50_Q47KN0 Cluster: Regulatory protein, LuxR:Response regul...    31   3.8  
UniRef50_Q1GTY9 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  
UniRef50_Q89H99 Cluster: Nitrilotriacetate monooxygenase; n=4; B...    31   5.1  
UniRef50_Q6CLH9 Cluster: Similar to sp|P36124 Saccharomyces cere...    31   6.7  
UniRef50_A2QEK4 Cluster: Contig An02c0330, complete genome. prec...    30   8.8  

>UniRef50_Q6GNC2 Cluster: LOC443671 protein; n=4; Xenopus|Rep:
           LOC443671 protein - Xenopus laevis (African clawed frog)
          Length = 364

 Score = 33.5 bits (73), Expect = 0.95
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -2

Query: 192 GATARPNVAVSPHWPNADRSSRLTFYKLLCNTNSTK*RNQKY 67
           GA  RP V+ SP+W        +T   L CN +ST   NQ+Y
Sbjct: 67  GALVRPVVSFSPNWATISLHDSIT---LTCNVSSTSLLNQRY 105


>UniRef50_A4BAB4 Cluster: Putative uncharacterized protein; n=1;
           Reinekea sp. MED297|Rep: Putative uncharacterized
           protein - Reinekea sp. MED297
          Length = 633

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 137 RSAFGQCGD-TATLGRAVAPSARPYSEHKTTDGVIEPERIVAPSINTFNHLTND*AY 304
           R+ +G C D TA L   +A      +    +    +P+R+V PS+N FNH+    AY
Sbjct: 312 RNRYGDCKDKTALLQALLALEGVEATPVLVSTNRTDPDRLVLPSLNYFNHIVLCLAY 368


>UniRef50_Q47KN0 Cluster: Regulatory protein, LuxR:Response
           regulator receiver; n=1; Thermobifida fusca YX|Rep:
           Regulatory protein, LuxR:Response regulator receiver -
           Thermobifida fusca (strain YX)
          Length = 225

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 19/76 (25%), Positives = 37/76 (48%)
 Frame = +3

Query: 108 IIYKMLSGTSGRRLASVETRQR*GEPSRRAPVPTQSTKQQMALLNPKE**RHLSIHLIT* 287
           +IY +L G +GR +   + RQ      R      ++T Q++A L  +E  R +   L+  
Sbjct: 123 LIYTILDGFAGRPMMDAKERQELIAEYRALQAQQRATNQKLAQLTKRE--RQVLDALVAG 180

Query: 288 RTTRLIPDRNYAPLLT 335
           +  ++I + +Y  + T
Sbjct: 181 KRAKVIAEESYVSIAT 196


>UniRef50_Q1GTY9 Cluster: Putative uncharacterized protein; n=1;
           Sphingopyxis alaskensis|Rep: Putative uncharacterized
           protein - Sphingopyxis alaskensis (Sphingomonas
           alaskensis)
          Length = 303

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +1

Query: 136 AVGVWPVWRHGNVRASRRAERPSLLRAQNNRWR 234
           A  +W  W H  V  + R   P   RA+ +RWR
Sbjct: 65  AAALWEEWLHHGVPGAARLVGPCFARAEEHRWR 97


>UniRef50_Q89H99 Cluster: Nitrilotriacetate monooxygenase; n=4;
           Bradyrhizobiaceae|Rep: Nitrilotriacetate monooxygenase -
           Bradyrhizobium japonicum
          Length = 187

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/27 (55%), Positives = 16/27 (59%)
 Frame = +2

Query: 128 RDERSAFGQCGDTATLGRAVAPSARPY 208
           RD RSA G  G   T+  AVAP  RPY
Sbjct: 27  RDFRSALGTYGTGVTIITAVAPDGRPY 53


>UniRef50_Q6CLH9 Cluster: Similar to sp|P36124 Saccharomyces
           cerevisiae YKR029c; n=1; Kluyveromyces lactis|Rep:
           Similar to sp|P36124 Saccharomyces cerevisiae YKR029c -
           Kluyveromyces lactis (Yeast) (Candida sphaerica)
          Length = 796

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
 Frame = -2

Query: 186 TARPNVAVSPHWP---NADRSSRLTFY-KLLCNTN 94
           TA+P V + PHWP   +A  S  LT Y +  CN N
Sbjct: 459 TAKPKVIIHPHWPIYIDARLSGNLTRYLRRSCNPN 493


>UniRef50_A2QEK4 Cluster: Contig An02c0330, complete genome.
           precursor; n=9; Pezizomycotina|Rep: Contig An02c0330,
           complete genome. precursor - Aspergillus niger
          Length = 804

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 130 GRAVGVWPVWRHGNVRASRRAERPSLLRAQNNRWRY*TRKNS 255
           G A+  W  W +G         RP+LL  QN+ W Y T ++S
Sbjct: 561 GDALRAW--WENGITNCVGDNTRPALLNQQNDMWPYWTNEDS 600


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 324,846,951
Number of Sequences: 1657284
Number of extensions: 5672296
Number of successful extensions: 13048
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13043
length of database: 575,637,011
effective HSP length: 88
effective length of database: 429,796,019
effective search space used: 10315104456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)