Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31482
         (340 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.1  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   2.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   2.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   4.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   8.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    20   8.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    20   8.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    20   8.0  

>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 183 ARPNVAVSPHWPNADRSSRLT 121
           ARP V  +P W  A  SS  T
Sbjct: 45  ARPGVVTTPRWGCARASSATT 65


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 59  FFFSIFFYCKATGTI 15
           FF S FFY   TG I
Sbjct: 241 FFISTFFYFFTTGNI 255


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 59  FFFSIFFYCKATGTI 15
           FF S FFY   TG I
Sbjct: 237 FFISTFFYFFTTGNI 251


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 44  FFYCKATGTIDYD 6
           FFYC AT   ++D
Sbjct: 308 FFYCAATKNPNFD 320


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
 Frame = +3

Query: 57  KSLNIFGSFIWLN*YYIIIYKMLSGTSGRRLASVETRQR*GE-PSRRAPV----PTQSTK 221
           KSLN+ G  IW        +  LSGT  + L ++    +  E P    P     PTQ+T+
Sbjct: 351 KSLNLAGVMIWS--IETDDFNGLSGTKYQILNAINAALKSDEIPPEPVPTPEPQPTQTTE 408

Query: 222 QQ 227
            +
Sbjct: 409 SE 410


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 195 LGATARPNVAVSPHWPNADRS 133
           +  T RP  A  P  P+AD S
Sbjct: 404 ISTTPRPEWARPPSTPSADGS 424


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -3

Query: 113 NYYVILIQPNKGTKNI*AFFFSIFFYCKATGTIDYDV 3
           N  V+ ++ N  T     +FF    Y      +DY++
Sbjct: 174 NKLVLALECNNSTSEGFDYFFGKMSYSHIFSLMDYNI 210


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -3

Query: 113 NYYVILIQPNKGTKNI*AFFFSIFFYCKATGTIDYDV 3
           N  V+ ++ N  T     +FF    Y      +DY++
Sbjct: 174 NKLVLALECNNSTSEGFDYFFGKMSYSHIFSLMDYNI 210


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 9/37 (24%), Positives = 16/37 (43%)
 Frame = -3

Query: 113 NYYVILIQPNKGTKNI*AFFFSIFFYCKATGTIDYDV 3
           N  V+ ++ N  T     +FF    Y      +DY++
Sbjct: 174 NKLVLALECNNSTSEGFDYFFGKMSYSHIFSLMDYNI 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,415
Number of Sequences: 336
Number of extensions: 1392
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)