Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31482
         (340 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB032945-1|BAA86433.2| 1854|Homo sapiens KIAA1119 protein protein.     29   2.8  
AB018268-1|BAA34445.1|  573|Homo sapiens KIAA0725 protein protein.     29   4.8  
AK025336-1|BAB15114.1|  963|Homo sapiens protein ( Homo sapiens ...    28   8.5  

>AB032945-1|BAA86433.2| 1854|Homo sapiens KIAA1119 protein protein.
          Length = 1854

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = -2

Query: 201  RALGATARPNVAVSPHWPNA----DRSSRLTFYKLLCNTNS 91
            R  G  A PN+     WPN+    D+   +  Y  +C TNS
Sbjct: 1281 RLAGRNAEPNINARSSWPNSEKHVDQEDAIEAYHGVCQTNS 1321


>AB018268-1|BAA34445.1|  573|Homo sapiens KIAA0725 protein protein.
          Length = 573

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +2

Query: 146 FGQCGDTATLGRAVAPSARPYSEHKTTDGVIEPERIVAPSINTFNHLTND 295
           F +  +   +GR        +S   +T   ++ +RI  PSIN   H TND
Sbjct: 115 FKKAQENQQIGRVEFLPVNWHSPLHSTGVDVDLQRITLPSINRLRHFTND 164


>AK025336-1|BAB15114.1|  963|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21683 fis, clone COL09335. ).
          Length = 963

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
 Frame = -2

Query: 201 RALGATARPNVAVSPHWPNA----DRSSRLTFYKLLCNTN 94
           R  G  A PN+     WPN+    D+   +  Y  +C TN
Sbjct: 416 RLAGRNAEPNINARSSWPNSEKHVDQEDAIEAYHGVCQTN 455


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,667,090
Number of Sequences: 237096
Number of extensions: 866091
Number of successful extensions: 1488
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)